Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0023s0260 Medicago truncatula HOM05D000008 ORTHO05D000005 8.8e-104 380.2 177 100.0
Medtr5g079120 Medicago truncatula HOM05D000008 ORTHO05D000005 1.1e-40 170.6 165 56.4
Medtr7g017260 Medicago truncatula HOM05D000008 ORTHO05D000005 1.2e-39 167.2 169 54.4
Medtr5g078950 Medicago truncatula HOM05D000008 ORTHO05D000005 1.1e-37 160.6 176 52.3
Medtr5g078910 Medicago truncatula HOM05D000008 ORTHO05D000005 3.5e-36 155.6 210 44.8
TPR.G3459 Trifolium pratense HOM05D000008 ORTHO05D000005 1.7e-35 153.3 171 52.6
Medtr8g060940 Medicago truncatula HOM05D000008 ORTHO05D000005 1.9e-34 149.8 169 51.5
Medtr0001s0360 Medicago truncatula HOM05D000008 ORTHO05D000005 6.2e-33 144.8 172 52.3
Medtr5g079290 Medicago truncatula HOM05D000008 ORTHO05D000005 1.8e-32 143.3 165 50.9
Psat2g042040 Pisum sativum HOM05D000008 ORTHO05D000005 2.1e-28 129.8 167 47.9
Medtr5g079220 Medicago truncatula HOM05D000008 ORTHO05D000005 1.3e-27 127.1 175 46.9
TPR.G3494 Trifolium pratense HOM05D000008 ORTHO05D000005 8.1e-25 117.9 171 42.7
TPR.G28637 Trifolium pratense HOM05D000008 ORTHO05D000005 9.0e-24 114.4 169 44.4
Medtr5g078800 Medicago truncatula HOM05D000008 ORTHO05D000005 2.0e-23 113.2 176 43.2
Psat2g043680 Pisum sativum HOM05D000008 ORTHO05D000005 1.0e-22 110.9 168 43.5
Medtr5g078930 Medicago truncatula HOM05D000008 ORTHO05D000005 2.1e-20 103.2 142 45.1
Psat0s855g0040 Pisum sativum HOM05D000008 ORTHO05D000005 2.7e-20 102.8 140 47.1
Medtr5g079140 Medicago truncatula HOM05D000008 ORTHO05D000005 3.5e-20 102.4 144 45.8
Psat0ss3069g0040 Pisum sativum HOM05D000008 ORTHO05D000005 3.5e-20 102.4 165 43.6
TPR.G3465 Trifolium pratense HOM05D000008 ORTHO05D000005 4.6e-20 102.1 176 40.3
Medtr5g078860 Medicago truncatula HOM05D000008 ORTHO05D000005 1.9e-18 96.7 210 34.3
Psat0s340g0040 Pisum sativum HOM05D000008 ORTHO05D000005 4.5e-15 85.5 167 38.3
Medtr0247s0040 Medicago truncatula HOM05D000008 ORTHO05D000005 1.0e-11 74.3 101 48.5
CiPaw.03G070400 Carya illinoinensis HOM05D000008 ORTHO05D000005 1.5e-10 70.5 178 29.8
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 3.3e-10 69.3 79 45.6
TAR622G0853 Trochodendron aralioides HOM05D000008 ORTHO05D000005 9.7e-10 67.8 79 44.3
Rhsim08G0087300 Rhododendron simsii HOM05D000008 ORTHO05D000005 2.2e-09 66.6 57 49.1
TAR622G0011 Trochodendron aralioides HOM05D000008 ORTHO05D000005 2.8e-09 66.2 79 46.8
Rhsim08G0087200 Rhododendron simsii HOM05D000008 ORTHO05D000005 6.3e-09 65.1 57 47.4
TPR.G3460 Trifolium pratense HOM05D000008 ORTHO05D000005 8.2e-09 64.7 49 65.3
Glyma.09G234900 Glycine max HOM05D000008 ORTHO05D000005 1.1e-08 64.3 80 45.0
Glyma.18G261700 Glycine max HOM05D000008 ORTHO05D000005 1.1e-08 64.3 94 38.3
Rhsim08G0087400 Rhododendron simsii HOM05D000008 ORTHO05D000005 1.1e-08 64.3 87 40.2
Lj2g0014088 Lotus japonicus HOM05D000008 ORTHO05D000005 4.1e-08 62.4 151 32.5
Lalb_Chr21g0318621 Lupinus albus HOM05D000008 ORTHO05D000005 5.3e-08 62.0 87 40.2
Rhsim08G0087500 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.3e-08 62.0 62 46.8
Rhsim10G0209900 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.3e-08 62.0 62 46.8
Glyma.18G262000 Glycine max HOM05D000008 ORTHO05D000005 9.0e-08 61.2 62 46.8
CDE05G1521 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 1.5e-07 60.5 71 45.1
CDE05G2248 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 1.5e-07 60.5 70 47.1
Glyma.19G025000 Glycine max HOM05D000008 ORTHO05D000005 1.5e-07 60.5 56 53.6
CSS0046378 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 2.0e-07 60.1 81 42.0
Medtr0193s0090 Medicago truncatula HOM05D000008 ORTHO05D000005 2.0e-07 60.1 114 36.8
TAR374G1535 Trochodendron aralioides HOM05D000008 ORTHO05D000005 2.0e-07 60.1 63 52.4
Rhsim08G0087800 Rhododendron simsii HOM05D000008 ORTHO05D000005 2.6e-07 59.7 68 42.6
QL02p056840 Quercus lobata HOM05D000008 ORTHO05D000005 3.4e-07 59.3 61 54.1
QL02p057135 Quercus lobata HOM05D000008 ORTHO05D000005 3.4e-07 59.3 61 54.1
Dinv14889 Davidia involucrata HOM05D000008 ORTHO05D000005 4.5e-07 58.9 98 36.7
Eucgr.F02842 Eucalyptus grandis HOM05D000008 ORTHO05D000005 5.9e-07 58.5 77 40.3
Lalb_Chr02g0159191 Lupinus albus HOM05D000008 ORTHO05D000005 7.7e-07 58.2 62 48.4
Oeu041966.1 Olea europaea HOM05D000008 ORTHO05D000005 7.7e-07 58.2 77 39.0
QL02p057371 Quercus lobata HOM05D000008 ORTHO05D000005 7.7e-07 58.2 61 54.1
QL02p057624 Quercus lobata HOM05D000008 ORTHO05D000005 7.7e-07 58.2 61 54.1
Actinidia16385 Actinidia chinensis HOM05D000008 ORTHO05D000005 1.3e-06 57.4 62 50.0
Dinv15856 Davidia involucrata HOM05D000008 ORTHO05D000005 1.3e-06 57.4 57 49.1
TPR.G33553 Trifolium pratense HOM05D000008 ORTHO05D000005 1.3e-06 57.4 52 55.8
TAR374G0245 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.3e-06 57.4 63 49.2
Atru.chr1.1852 Acer truncatum HOM05D000008 ORTHO05D000005 1.7e-06 57.0 54 59.3
GSVIVG01030819001 Vitis vinifera HOM05D000008 ORTHO05D000005 1.7e-06 57.0 61 49.2
Dinv14892 Davidia involucrata HOM05D000008 ORTHO05D000005 2.2e-06 56.6 59 50.8
Oeu050994.1 Olea europaea HOM05D000008 ORTHO05D000005 2.2e-06 56.6 77 37.7
Potri.017G125800 Populus trichocarpa HOM05D000008 ORTHO05D000005 2.2e-06 56.6 51 56.9
Haze_14226 Corylus avellana HOM05D000008 ORTHO05D000005 2.9e-06 56.2 98 36.7
Potri.017G125900 Populus trichocarpa HOM05D000008 ORTHO05D000005 2.9e-06 56.2 51 56.9
CSS0000220 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 3.8e-06 55.8 61 44.3
Lalb_Chr02g0159231 Lupinus albus HOM05D000008 ORTHO05D000005 3.8e-06 55.8 123 35.8
Oeu050989.1 Olea europaea HOM05D000008 ORTHO05D000005 3.8e-06 55.8 91 38.5
Dinv14890 Davidia involucrata HOM05D000008 ORTHO05D000005 5.0e-06 55.5 59 52.5
HanXRQChr04g0122851 Helianthus annuus HOM05D000008 ORTHO05D000005 6.5e-06 55.1 52 51.9
Lj2A433T13 Lonicera japonica HOM05D000008 ORTHO05D000005 8.5e-06 54.7 56 48.2
Oeu027565.1 Olea europaea HOM05D000008 ORTHO05D000005 8.5e-06 54.7 78 41.0


User provided reference genes

Program Settings