Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0010s0190 Medicago truncatula HOM05D000341 ORTHO05D001197 2.1e-58 228.8 111 100.0
Phvul.003G034000 Phaseolus vulgaris HOM05D000459 ORTHO05D001197 2.8e-23 112.1 136 47.1
Lj2g0021842 Lotus japonicus HOM05D000341 ORTHO05D001197 4.0e-22 108.2 141 44.0
Glyma.04G153400 Glycine max HOM05D000341 ORTHO05D001197 4.5e-21 104.8 138 44.9
VMungo1215G0877 Vigna mungo HOM05D000459 ORTHO05D001197 4.5e-21 104.8 136 44.1
Medtr5g038940 Medicago truncatula HOM05D000341 ORTHO05D001197 1.0e-20 103.6 136 42.6
Medtr5g066700 Medicago truncatula HOM05D000341 ORTHO05D001197 1.0e-20 103.6 138 43.5
Medtr5g066690 Medicago truncatula HOM05D000341 ORTHO05D001197 2.2e-20 102.4 138 43.5
Psat2g064800 Pisum sativum HOM05D000341 ORTHO05D001197 3.2e-19 98.6 138 39.9
Medtr5g038950 Medicago truncatula HOM05D000341 ORTHO05D001197 9.3e-19 97.1 136 39.7
Psat2g072480 Pisum sativum HOM05D000341 ORTHO05D001197 1.0e-17 93.6 138 39.1
Medtr5g038960 Medicago truncatula HOM05D000341 ORTHO05D001197 2.3e-17 92.4 136 39.7
Medtr3g463000 Medicago truncatula HOM05D000341 ORTHO05D001197 3.0e-17 92.0 136 39.7
Medtr3g463020 Medicago truncatula HOM05D000341 ORTHO05D001197 3.0e-17 92.0 136 39.7
TPR.G20311 Trifolium pratense HOM05D000341 ORTHO05D001197 8.7e-17 90.5 120 44.2
Ca_02715_v3 Cicer arietinum L. HOM05D000341 ORTHO05D001197 1.1e-16 90.1 137 40.9
TPR.G30592 Trifolium pratense HOM05D000341 ORTHO05D001197 1.1e-16 90.1 123 42.3
Psat2g072360 Pisum sativum HOM05D000341 ORTHO05D001197 7.4e-16 87.4 135 40.7
TPR.G20878 Trifolium pratense HOM05D000341 ORTHO05D001197 1.3e-15 86.7 120 42.5
Glyma.01G093800 Glycine max HOM05D000086 ORTHO05D001197 2.2e-15 85.9 76 59.2
TPR.G10649 Trifolium pratense HOM05D000341 ORTHO05D001197 3.7e-15 85.1 122 41.8
TPR.G30419 Trifolium pratense HOM05D000341 ORTHO05D001197 1.4e-14 83.2 134 38.1
Manes.14G094700 Manihot esculenta HOM05D000341 ORTHO05D000557 1.3e-12 76.6 142 35.9
Manes.06G076300 Manihot esculenta HOM05D000341 ORTHO05D001197 2.5e-11 72.4 144 35.4
Potri.010G133200 Populus trichocarpa HOM05D000341 ORTHO05D001197 1.6e-10 69.7 142 34.5
Potri.010G133300 Populus trichocarpa HOM05D000341 ORTHO05D001197 1.6e-10 69.7 142 34.5
Potri.010G133700 Populus trichocarpa HOM05D000341 ORTHO05D001197 3.6e-10 68.6 141 34.8
FAN22G1890 Fragaria x ananassa HOM05D000341 ORTHO05D001197 1.9e-08 62.8 138 32.6
CiPaw.06G097800 Carya illinoinensis HOM05D000341 ORTHO05D001197 3.7e-07 58.5 150 30.7
RcHm_v2.0_Chr1g0325441 Rosa chinensis HOM05D000341 ORTHO05D001197 1.4e-06 56.6 141 34.0
Sabra10G0102300 Salix brachista HOM05D000341 ORTHO05D001197 1.4e-06 56.6 144 31.9
Atru.chr11.1436 Acer truncatum HOM05D000341 ORTHO05D001197 6.9e-06 54.3 144 29.2
Atru.chr11.1466 Acer truncatum HOM05D000341 ORTHO05D001197 6.9e-06 54.3 144 29.2
RcHm_v2.0_Chr4g0436511 Rosa chinensis HOM05D000341 ORTHO05D001197 6.9e-06 54.3 140 33.6
Haze_11810 Corylus avellana HOM05D000341 ORTHO05D001197 9.1e-06 53.9 138 33.3


User provided reference genes

Program Settings