Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.1e-81 306.6 157 100.0
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 6.5e-26 121.3 75 81.3
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 6.5e-26 121.3 75 81.3
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-25 119.8 75 81.3
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 4.2e-25 118.6 75 77.3
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 5.5e-25 118.2 75 80.0
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 7.2e-25 117.9 75 78.7
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 7.2e-25 117.9 78 76.9
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 7.2e-25 117.9 75 78.7
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 1.2e-24 117.1 75 78.7
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.6e-24 116.7 85 67.1
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.6e-24 115.5 80 70.0
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 6.1e-24 114.8 72 80.6
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 6.1e-24 114.8 72 80.6
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 8.0e-24 114.4 80 71.2
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.4e-23 113.6 74 74.3
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 1.4e-23 113.6 75 76.0
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 1.8e-23 113.2 72 79.2
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 4.0e-23 112.1 75 74.7
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 4.0e-23 112.1 75 73.3
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.2e-23 111.7 78 69.2
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 5.2e-23 111.7 78 70.5
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 5.2e-23 111.7 78 70.5
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 6.8e-23 111.3 74 73.0
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 6.8e-23 111.3 75 72.0
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-23 110.9 92 64.1
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-23 110.9 92 64.1
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-23 110.9 92 64.1
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-23 110.9 92 64.1
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-23 110.9 92 64.1
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 8.8e-23 110.9 88 64.8
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.5e-22 110.2 80 67.5
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 2.0e-22 109.8 145 46.9
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 2.0e-22 109.8 130 50.8
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-22 109.8 81 66.7
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 3.4e-22 109.0 78 70.5
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.4e-22 108.6 80 68.8
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.5e-22 107.8 80 65.0
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 1.3e-21 107.1 78 69.2
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 2.8e-21 105.9 78 69.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 3.7e-21 105.5 81 65.4
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 6.3e-21 104.8 80 63.8
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 1.1e-20 104.0 75 68.0
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.4e-20 102.8 75 66.7
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.1e-20 102.4 74 68.9
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 3.1e-20 102.4 78 66.7
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.6e-19 100.1 78 65.4
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 3.5e-19 99.0 70 71.4
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.9e-18 95.9 73 64.4
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.9e-18 95.9 70 65.7
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 5.0e-18 95.1 58 81.0
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 5.0e-18 95.1 70 64.3
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 6.5e-18 94.7 69 66.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-17 93.6 59 79.7
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 2.8e-16 89.4 56 76.8
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 3.6e-16 89.0 119 47.1
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 4.7e-16 88.6 59 74.6
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 1.0e-15 87.4 60 70.0
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 1.0e-15 87.4 64 67.2
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-14 83.2 59 72.9
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-14 83.2 59 71.2
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 1.4e-12 77.0 54 74.1
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 1.8e-12 76.6 59 67.8
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 5.4e-12 75.1 67 56.7
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 2.0e-11 73.2 53 62.3
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 2.9e-10 69.3 56 60.7
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 2.5e-09 66.2 52 59.6
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 7.3e-09 64.7 59 62.7
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 3.6e-08 62.4 74 44.6
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 8.0e-08 61.2 71 45.1
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 3.0e-07 59.3 66 45.5
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-07 58.9 48 68.8
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 4.0e-07 58.9 45 62.2
SMO172G0122 Selaginella moellendorffii HOM05D003936 ORTHO05D004747 3.4e-06 55.8 69 42.0


User provided reference genes

Program Settings