Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MapolyY_B0034 Marchantia polymorpha HOM05D001109 ORTHO05D001051 8.5e-54 213.4 106 100.0
Mapoly0133s0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 2.8e-44 181.8 100 91.0
AagrBONN_evm.TU.Sc2ySwM_228.4654 Anthoceros agrestis HOM05D000865 ORTHO05D000739 1.1e-16 90.1 95 45.3
Pp3c3_32730 Physcomitrium patens HOM05D001109 ORTHO05D001051 9.2e-16 87.0 99 42.4
Pp3c12_16910 Physcomitrium patens HOM05D001109 ORTHO05D001051 4.6e-15 84.7 96 44.8
AagrBONN_evm.TU.Sc2ySwM_362.792 Anthoceros agrestis HOM05D001109 ORTHO05D002316 1.1e-13 80.1 100 38.0
Pp3c4_8950 Physcomitrium patens HOM05D001109 ORTHO05D001051 3.3e-13 78.6 95 43.2
SMO115G0119 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 3.6e-12 75.1 93 40.9
SEGI_39709 Sequoiadendron giganteum HOM05D002301 ORTHO05D002316 3.6e-12 75.1 102 42.2
Pp3c22_3410 Physcomitrium patens HOM05D001109 ORTHO05D001051 2.3e-11 72.4 97 36.1
Mapoly0015s0136 Marchantia polymorpha HOM05D001109 ORTHO05D000739 3.4e-10 68.6 98 34.7
Nn4g22573 Nelumbo nucifera HOM05D002301 ORTHO05D002316 3.4e-10 68.6 97 37.1
Mapoly0104s0027 Marchantia polymorpha HOM05D001109 ORTHO05D000739 4.4e-10 68.2 97 38.1
Mapoly0005s0112 Marchantia polymorpha HOM05D001109 ORTHO05D000739 1.7e-09 66.2 94 37.2
Mapoly0005s0113 Marchantia polymorpha HOM05D001109 ORTHO05D000739 1.7e-09 66.2 94 37.2
SEGI_26923 Sequoiadendron giganteum HOM05D001109 ORTHO05D001051 3.8e-09 65.1 95 33.7
AagrBONN_evm.TU.Sc2ySwM_362.737 Anthoceros agrestis HOM05D001109 ORTHO05D001051 4.9e-09 64.7 94 33.0
Pp3c18_18780 Physcomitrium patens HOM05D001109 ORTHO05D001051 6.4e-09 64.3 101 34.7
CAN.G1652.15 Capsicum annuum HOM05D000865 ORTHO05D000739 1.9e-08 62.8 108 31.5
MapolyY_B0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 4.1e-08 61.6 93 35.5
Peaxi162Scf00037g00096 Petunia axillaris HOM05D000865 ORTHO05D000739 5.4e-08 61.2 103 30.1
ClCG11G010410 Citrullus lanatus HOM05D001109 ORTHO05D001051 1.2e-07 60.1 85 41.2
Gohir.A08G221618 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.2e-07 60.1 100 32.0
Gorai.004G254600 Gossypium raimondii HOM05D001109 ORTHO05D001051 1.2e-07 60.1 100 32.0
Pp3c18_18670 Physcomitrium patens HOM05D000865 ORTHO05D000739 1.2e-07 60.1 91 31.9
TAR636G2581 Trochodendron aralioides HOM05D000865 ORTHO05D000739 1.2e-07 60.1 100 34.0
Solyc05g055920.4 Solanum lycopersicum HOM05D001109 ORTHO05D001051 1.6e-07 59.7 100 31.0
Sopen05g034320 Solanum pennellii HOM05D001109 ORTHO05D001051 1.6e-07 59.7 100 31.0
COL.COLO4_15517 Corchorus olitorius HOM05D001109 ORTHO05D001051 2.1e-07 59.3 96 32.3
Gohir.D08G234700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 3.5e-07 58.5 98 33.7
Gorai.004G249500 Gossypium raimondii HOM05D001109 ORTHO05D001051 3.5e-07 58.5 98 33.7
Glyma.09G045700 Glycine max HOM05D000865 ORTHO05D000739 4.6e-07 58.2 102 33.3
Gohir.A08G217700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 4.6e-07 58.2 94 34.0
Peaxi162Scf00156g00922 Petunia axillaris HOM05D001109 ORTHO05D001051 4.6e-07 58.2 93 33.3
Pp3c21_12250 Physcomitrium patens HOM05D001109 ORTHO05D000739 4.6e-07 58.2 94 35.1
Pp3c2_20180 Physcomitrium patens HOM05D001109 ORTHO05D001051 4.6e-07 58.2 98 33.7
Nitab4.5_0014335g0010 Nicotiana tabacum HOM05D000865 ORTHO05D000739 6.0e-07 57.8 102 29.4
Phvul.009G247100 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 6.0e-07 57.8 102 32.4
EL10Ac7g17489 Beta vulgaris HOM05D000865 ORTHO05D000739 7.8e-07 57.4 98 35.7
ATR0706G083 Amborella trichopoda HOM05D000865 ORTHO05D000739 1.0e-06 57.0 101 34.7
MELO3C008645.2 Cucumis melo HOM05D001109 ORTHO05D001051 1.0e-06 57.0 85 40.0
CsaV3_2G009950 Cucumis sativus L. HOM05D001109 ORTHO05D001051 1.0e-06 57.0 85 40.0
Oeu004922.1 Olea europaea HOM05D001109 ORTHO05D001051 1.0e-06 57.0 91 38.5
Rhsim05G0141500 Rhododendron simsii HOM05D000865 ORTHO05D000739 1.0e-06 57.0 98 36.7
Glyma.15G152900 Glycine max HOM05D000865 ORTHO05D000739 1.3e-06 56.6 102 32.4
Medtr1g045780 Medicago truncatula HOM05D001109 ORTHO05D001051 1.3e-06 56.6 93 36.6
Sopen01g042930 Solanum pennellii HOM05D000865 ORTHO05D000739 1.3e-06 56.6 103 27.2
FAN12G1752 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.7e-06 56.2 101 35.6
FAN22G2263 Fragaria x ananassa HOM05D000865 ORTHO05D000739 3.0e-06 55.5 104 30.8
Nitab4.5_0002344g0080 Nicotiana tabacum HOM05D000865 ORTHO05D000739 3.0e-06 55.5 102 29.4
Pp3c2_20570 Physcomitrium patens HOM05D002301 ORTHO05D002316 3.0e-06 55.5 75 42.7
Lalb_Chr15g0083531 Lupinus albus HOM05D000865 ORTHO05D000739 5.1e-06 54.7 104 31.7
Sc17g0003320 Simmondsia chinensis HOM05D000865 ORTHO05D000739 5.1e-06 54.7 101 33.7
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 6.6e-06 54.3 100 30.0
DCAR_030533 Daucus carota HOM05D000865 ORTHO05D000739 6.6e-06 54.3 101 27.7
FvH4_4g17890 Fragaria vesca HOM05D000865 ORTHO05D000739 6.6e-06 54.3 105 34.3
FAN17G0945 Fragaria x ananassa HOM05D000865 ORTHO05D000739 6.6e-06 54.3 104 30.8
FAN12G1524 Fragaria x ananassa HOM05D000865 ORTHO05D000739 8.6e-06 53.9 101 34.7
Oeu040760.1 Olea europaea HOM05D000865 ORTHO05D000739 8.6e-06 53.9 103 29.1
PGSC0003DMG400024703 Solanum tuberosum HOM05D000865 ORTHO05D000739 8.6e-06 53.9 103 27.2


User provided reference genes

Program Settings