Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MapolyY_A0058 Marchantia polymorpha HOM05D000062 ORTHO05D015230 5.7e-75 284.3 154 100.0
Mapoly0003s0020 Marchantia polymorpha HOM05D000062 ORTHO05D006089 5.6e-54 214.5 152 82.2
CBR_g51500 Chara braunii HOM05D000062 ORTHO05D006089 8.9e-28 127.5 125 55.2
GSVIVG01035736001 Vitis vinifera HOM05D000062 ORTHO05D006089 7.8e-24 114.4 159 44.7
Psat5g108200 Pisum sativum HOM05D000062 ORTHO05D006089 1.0e-23 114.0 133 46.6
GSVIVG01038380001 Vitis vinifera HOM05D000062 ORTHO05D006089 3.0e-23 112.5 159 44.0
GSVIVG01026352001 Vitis vinifera HOM05D000062 ORTHO05D006089 1.1e-22 110.5 159 43.4
Zm00001eb188700 Zea mays HOM05D000062 ORTHO05D006089 1.1e-22 110.5 133 47.4
Eucgr.C01277 Eucalyptus grandis HOM05D000062 ORTHO05D006089 3.3e-22 109.0 136 44.9
Os02g0710900 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D006089 5.6e-22 108.2 133 45.9
MBI18_g19855_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D006089 9.6e-22 107.5 133 45.1
QL04p065237 Quercus lobata HOM05D000062 ORTHO05D006089 9.6e-22 107.5 159 44.0
HPP92_000271 Vanilla planifolia HOM05D000062 ORTHO05D006089 9.6e-22 107.5 156 41.7
ECA246G4505 Erigeron canadensis HOM05D000062 ORTHO05D006089 1.6e-21 106.7 154 43.5
VMungo1383G2414 Vigna mungo HOM05D000062 ORTHO05D006089 1.6e-21 106.7 160 42.5
Sabra16G0026400 Salix brachista HOM05D001005 ORTHO05D006089 2.1e-21 106.3 159 41.5
Ca_16307_v3 Cicer arietinum L. HOM05D000062 ORTHO05D006089 2.8e-21 105.9 159 43.4
PGR042G1516 Punica granatum HOM05D000062 ORTHO05D006089 2.8e-21 105.9 157 42.7
Atru.chr8.953 Acer truncatum HOM05D000062 ORTHO05D006089 3.6e-21 105.5 156 44.2
MSTRG.14110 Avicennia marina HOM05D000062 ORTHO05D006089 3.6e-21 105.5 154 44.8
Cfa014184 Carpinus fangiana HOM05D000062 ORTHO05D006089 3.6e-21 105.5 154 43.5
TAR626G1573 Trochodendron aralioides HOM05D000062 ORTHO05D006089 8.1e-21 104.4 154 42.2
Phvul.006G001600 Phaseolus vulgaris HOM05D000062 ORTHO05D006089 1.1e-20 104.0 156 41.0
Ciclev10011017m.g Citrus clementina HOM05D000062 ORTHO05D006089 1.4e-20 103.6 156 42.3
Hund09663 Selenicereus undatus HOM05D000062 ORTHO05D006089 1.4e-20 103.6 155 42.6
Sabra16G0021700 Salix brachista HOM05D001005 ORTHO05D006089 1.8e-20 103.2 159 40.3
SGA_v2.0_scaffold159G37541 Striga asiatica HOM05D000062 ORTHO05D006089 1.8e-20 103.2 154 45.5
arahy.Tifrunner.gnm1.ann1.AD0Y88 Arachis hypogaea HOM05D000062 ORTHO05D006089 2.4e-20 102.8 122 45.1
Zm00001eb188750 Zea mays HOM05D000062 ORTHO05D006089 2.4e-20 102.8 133 45.1
Glyma.13G003700 Glycine max HOM05D000062 ORTHO05D006089 3.1e-20 102.4 159 40.3
MD17G1127600 Malus domestica HOM05D000062 ORTHO05D006089 3.1e-20 102.4 159 41.5
ATR0165G012 Amborella trichopoda HOM05D000062 ORTHO05D006089 4.0e-20 102.1 151 41.1
Migut.H01267 Erythranthe guttata HOM05D000062 ORTHO05D006089 4.0e-20 102.1 154 44.8
MD09G1137300 Malus domestica HOM05D000062 ORTHO05D006089 4.0e-20 102.1 159 41.5
TWI32G0255 Tripterygium wilfordii HOM05D000062 ORTHO05D006089 4.0e-20 102.1 153 43.8
TWI60G1018 Tripterygium wilfordii HOM05D000062 ORTHO05D006089 4.0e-20 102.1 153 44.4
BcaNung00164 Brassica carinata HOM05D000076 ORTHO05D006089 5.3e-20 101.7 133 45.1
FAN02G1751 Fragaria x ananassa HOM05D000062 ORTHO05D006089 5.3e-20 101.7 154 42.2
Glyma.20G065900 Glycine max HOM05D000062 ORTHO05D006089 5.3e-20 101.7 156 40.4
RcHm_v2.0_Chr2g0153811 Rosa chinensis HOM05D000062 ORTHO05D006089 5.3e-20 101.7 159 41.5
Zm00001eb252410 Zea mays HOM05D000062 ORTHO05D006089 5.3e-20 101.7 153 43.1
Ah.11g049140 Amaranthus hybridus HOM05D000062 ORTHO05D006089 6.9e-20 101.3 153 41.8
Duzib106G1641 Durio zibethinus HOM05D000062 ORTHO05D006089 6.9e-20 101.3 156 41.7
Medtr3g081170 Medicago truncatula HOM05D000062 ORTHO05D006089 6.9e-20 101.3 158 42.4
PSO170G1841 Papaver somniferum HOM05D000062 ORTHO05D006089 6.9e-20 101.3 154 40.9
Dinv17737 Davidia involucrata HOM05D000062 ORTHO05D006089 9.0e-20 100.9 159 41.5
Gohir.A10G192200 Gossypium hirsutum HOM05D000062 ORTHO05D006089 9.0e-20 100.9 125 44.8
Nn4g26583 Nelumbo nucifera HOM05D000062 ORTHO05D006089 9.0e-20 100.9 120 46.7
Prupe.3G187600 Prunus persica HOM05D000062 ORTHO05D006089 9.0e-20 100.9 159 42.1
BcaC06g33504 Brassica carinata HOM05D000076 ORTHO05D006089 1.2e-19 100.5 125 45.6
BcaNung02855 Brassica carinata HOM05D000076 ORTHO05D006089 1.2e-19 100.5 125 45.6
AUR62024598 Chenopodium quinoa HOM05D000062 ORTHO05D006089 1.2e-19 100.5 148 42.6
Potri.016G019800 Populus trichocarpa HOM05D000062 ORTHO05D006089 1.2e-19 100.5 156 40.4
PGR044G0700 Punica granatum HOM05D000062 ORTHO05D006089 1.2e-19 100.5 158 42.4
TPR.G33600 Trifolium pratense HOM05D000062 ORTHO05D006089 1.2e-19 100.5 156 41.0
AT4G16660 Arabidopsis thaliana HOM05D000062 ORTHO05D006089 1.5e-19 100.1 132 46.2
Carub.0007s2474 Capsella rubella HOM05D000062 ORTHO05D006089 1.5e-19 100.1 125 46.4
Haze_25506 Corylus avellana HOM05D000062 ORTHO05D006089 1.5e-19 100.1 156 42.3
Lsat_1_v5_gn_3_36561 Lactuca sativa HOM05D000062 ORTHO05D006089 1.5e-19 100.1 154 42.2
Lj1A1038T61 Lonicera japonica HOM05D000062 ORTHO05D006089 1.5e-19 100.1 153 41.8
Lj6g0023196 Lotus japonicus HOM05D000062 ORTHO05D006089 1.5e-19 100.1 156 41.0
CANSAT64G0637 Cannabis sativa HOM05D000062 ORTHO05D006089 2.0e-19 99.8 156 40.4
CiPaw.08G183200 Carya illinoinensis HOM05D000062 ORTHO05D006089 2.0e-19 99.8 154 42.9
COL.COLO4_07158 Corchorus olitorius HOM05D000062 ORTHO05D006089 2.6e-19 99.4 156 41.0
Lalb_Chr24g0402841 Lupinus albus HOM05D000062 ORTHO05D006089 2.6e-19 99.4 157 43.3
AL7G38090 Arabidopsis lyrata HOM05D000062 ORTHO05D006089 3.4e-19 99.0 132 46.2
CsaV3_4G032260 Cucumis sativus L. HOM05D000062 ORTHO05D006089 3.4e-19 99.0 157 41.4
Cc05_g00190 Coffea canephora HOM05D000062 ORTHO05D006089 4.4e-19 98.6 154 42.2
Lalb_Chr22g0360831 Lupinus albus HOM05D000062 ORTHO05D006089 4.4e-19 98.6 151 40.4
PSO017G0501 Papaver somniferum HOM05D000062 ORTHO05D006089 4.4e-19 98.6 154 40.3
SMO141G0294 Selaginella moellendorffii HOM05D000062 ORTHO05D006089 4.4e-19 98.6 153 43.8
Manes.09G073400 Manihot esculenta HOM05D000062 ORTHO05D006089 5.8e-19 98.2 153 41.2
Thhalv10024376m.g Eutrema salsugineum HOM05D000062 ORTHO05D006089 7.6e-19 97.8 132 45.5
FAN14G5920 Fragaria x ananassa HOM05D000062 ORTHO05D006089 7.6e-19 97.8 159 40.9
Gohir.D06G180600 Gossypium hirsutum HOM05D000062 ORTHO05D006089 7.6e-19 97.8 159 40.9
Gorai.010G212100 Gossypium raimondii HOM05D000062 ORTHO05D006089 7.6e-19 97.8 159 40.9
Sed0003548 Sechium edule HOM05D000062 ORTHO05D006089 7.6e-19 97.8 157 41.4
Actinidia12518 Actinidia chinensis HOM05D000062 ORTHO05D006089 9.9e-19 97.4 159 39.6
BcaC09g50395 Brassica carinata HOM05D000076 ORTHO05D006089 9.9e-19 97.4 125 45.6
FvH4_6g39720 Fragaria vesca HOM05D000062 ORTHO05D006089 9.9e-19 97.4 159 40.9
unitig_26.g9919 Utricularia gibba HOM05D000062 ORTHO05D006089 9.9e-19 97.4 153 43.1
Gohir.A06G171800 Gossypium hirsutum HOM05D000062 ORTHO05D006089 1.3e-18 97.1 156 40.4
HanXRQChr06g0170921 Helianthus annuus HOM05D000062 ORTHO05D006089 1.3e-18 97.1 154 40.3
Sp7g15270 Schrenkiella parvula HOM05D000062 ORTHO05D006089 1.3e-18 97.1 125 44.8
MELO3C026399.2 Cucumis melo HOM05D000062 ORTHO05D006089 1.7e-18 96.7 156 39.7
THA.LOC104815497 Tarenaya hassleriana HOM05D000062 ORTHO05D006089 1.7e-18 96.7 154 40.9
Nitab4.5_0008439g0040 Nicotiana tabacum HOM05D000062 ORTHO05D006089 2.2e-18 96.3 159 40.9
Aqoxy1G01454 Aquilegia oxysepala HOM05D000062 ORTHO05D006089 2.9e-18 95.9 159 40.3
ClCG11G016750 Citrullus lanatus HOM05D000062 ORTHO05D006089 2.9e-18 95.9 157 42.7
Haze_12559 Corylus avellana HOM05D000062 ORTHO05D006089 2.9e-18 95.9 105 51.4
Peaxi162Scf00833g00535 Petunia axillaris HOM05D000062 ORTHO05D006089 2.9e-18 95.9 159 40.3
Sabra06G0016000 Salix brachista HOM05D000062 ORTHO05D006089 2.9e-18 95.9 159 39.0
HanXRQChr17g0541391 Helianthus annuus HOM05D000062 ORTHO05D006089 3.8e-18 95.5 154 40.9
Thecc.10G130900 Theobroma cacao HOM05D000062 ORTHO05D006089 3.8e-18 95.5 159 40.9
Potri.006G022100 Populus trichocarpa HOM05D000062 ORTHO05D006089 4.9e-18 95.1 159 39.6
FAN05G3788 Fragaria x ananassa HOM05D000062 ORTHO05D006089 6.4e-18 94.7 159 39.6
Sopen07g023120 Solanum pennellii HOM05D000062 ORTHO05D006089 6.4e-18 94.7 159 40.9
Gorai.011G224200 Gossypium raimondii HOM05D000062 ORTHO05D006089 8.4e-18 94.4 159 40.3
Gohir.D10G200000 Gossypium hirsutum HOM05D000062 ORTHO05D006089 1.1e-17 94.0 159 40.3
Solyc07g043560.4 Solanum lycopersicum HOM05D000062 ORTHO05D006089 1.1e-17 94.0 159 40.3
Aa31LG2G12850 Aethionema arabicum HOM05D000062 ORTHO05D006089 1.4e-17 93.6 170 38.8
arahy.Tifrunner.gnm1.ann1.Q3EEPT Arachis hypogaea HOM05D000062 ORTHO05D006089 1.4e-17 93.6 115 44.3
FAN09G3136 Fragaria x ananassa HOM05D000062 ORTHO05D006089 1.4e-17 93.6 159 39.6
CDE12G0959 Ceratophyllum demersum HOM05D000062 ORTHO05D006089 1.9e-17 93.2 153 39.9
Sed0011024 Sechium edule HOM05D000062 ORTHO05D006089 1.9e-17 93.2 156 38.5
THA.LOC104814475 Tarenaya hassleriana HOM05D000062 ORTHO05D006089 3.2e-17 92.4 154 40.3
CSS0015117 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D006089 4.2e-17 92.0 154 39.6
A03p50110 Brassica napus HOM05D000062 ORTHO05D006089 9.3e-17 90.9 154 41.6
BraA03t14104Z Brassica rapa HOM05D000062 ORTHO05D006089 9.3e-17 90.9 154 41.6
C07p48150 Brassica napus HOM05D000062 ORTHO05D006089 1.2e-16 90.5 155 41.3
CARHR223160 Cardamine hirsuta HOM05D000062 ORTHO05D006089 1.2e-16 90.5 132 40.9
PGSC0003DMG400015920 Solanum tuberosum HOM05D000062 ORTHO05D006089 1.2e-16 90.5 158 39.2
Duzib114G0005 Durio zibethinus HOM05D000062 ORTHO05D006089 1.6e-16 90.1 159 39.0
Cpa.g.sc29.171 Carica papaya HOM05D000062 ORTHO05D006089 2.1e-16 89.7 134 41.0
Rhsim12G0014100 Rhododendron simsii HOM05D000062 ORTHO05D006089 2.1e-16 89.7 142 39.4
CAN.G819.6 Capsicum annuum HOM05D000062 ORTHO05D006089 3.5e-16 89.0 159 39.0
C01p25980 Brassica napus HOM05D000062 ORTHO05D006089 1.0e-15 87.4 163 40.5
BolC1t02543H Brassica oleracea HOM05D000062 ORTHO05D006089 1.3e-15 87.0 163 40.5
DCAR_013333 Daucus carota HOM05D000062 ORTHO05D006089 1.7e-15 86.7 152 38.8
vmacro08751 Vaccinium macrocarpon HOM05D000062 ORTHO05D006089 2.3e-15 86.3 122 42.6
BolC7t45338H Brassica oleracea HOM05D000062 ORTHO05D006089 3.0e-15 85.9 167 38.3
FAN14G1066 Fragaria x ananassa HOM05D000062 ORTHO05D006089 5.1e-15 85.1 154 37.7
PRCOL_00001664 Prasinoderma coloniale HOM05D000062 ORTHO05D006089 8.7e-15 84.3 126 43.7
AUR62011754 Chenopodium quinoa HOM05D000062 ORTHO05D006089 2.5e-14 82.8 130 39.2
Sc17g0000220 Simmondsia chinensis HOM05D000062 ORTHO05D006089 3.3e-14 82.4 90 47.8
DCAR_009834 Daucus carota HOM05D000062 ORTHO05D006089 9.6e-14 80.9 167 37.1
DCAR_009836 Daucus carota HOM05D000062 ORTHO05D006089 9.6e-14 80.9 167 37.1
Aqoxy7G02953 Aquilegia oxysepala HOM05D000062 ORTHO05D006089 2.1e-13 79.7 90 48.9
MCO04G028 Micromonas commoda HOM05D000062 ORTHO05D006089 6.2e-13 78.2 136 37.5
Oeu056840.1 Olea europaea HOM05D000062 ORTHO05D006089 1.4e-12 77.0 109 41.3
Ah.02g112550 Amaranthus hybridus HOM05D000062 ORTHO05D006089 3.1e-12 75.9 131 34.4
FAN17G1028 Fragaria x ananassa HOM05D000062 ORTHO05D015230 5.8e-11 71.6 81 45.7
Nitab4.5_0001843g0090 Nicotiana tabacum HOM05D000062 ORTHO05D006089 7.6e-11 71.2 129 38.8
BcaC07g41880 Brassica carinata HOM05D000062 ORTHO05D015230 4.9e-10 68.6 81 48.1
CDE04G3723 Ceratophyllum demersum HOM05D000062 ORTHO05D006089 8.4e-10 67.8 119 37.8
Eucgr.C00679 Eucalyptus grandis HOM05D000062 ORTHO05D015230 2.4e-09 66.2 78 46.2
Pp3c14_19430 Physcomitrium patens HOM05D000062 ORTHO05D006089 2.4e-09 66.2 151 34.4
Cre10.g439900 Chlamydomonas reinhardtii HOM05D000062 ORTHO05D006089 1.2e-08 63.9 155 34.2
Actinidia31600 Actinidia chinensis HOM05D000062 ORTHO05D006089 1.8e-07 60.1 159 33.3
Lsat_1_v5_gn_5_130141 Lactuca sativa HOM05D000062 ORTHO05D001642 5.6e-06 55.1 136 27.9


User provided reference genes

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