Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MapolyY_A0038 Marchantia polymorpha HOM05D001560 ORTHO05D003613 5.0e-47 190.7 90 100.0
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 7.1e-09 63.9 68 44.1
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 7.1e-09 63.9 68 44.1
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 2.7e-08 62.0 69 43.5
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 2.7e-08 62.0 68 47.1
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 4.6e-08 61.2 68 45.6
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.6e-08 61.2 68 44.1
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 4.6e-08 61.2 68 44.1
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 4.6e-08 61.2 68 47.1
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 6.0e-08 60.8 69 46.4
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.0e-07 60.1 66 48.5
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 1.7e-07 59.3 68 44.1
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.0e-07 58.5 69 44.9
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.0e-07 58.5 68 44.1
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 45.6
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 6.6e-07 57.4 68 42.6
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 8.7e-07 57.0 66 36.4
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 44.1
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 44.1
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 44.1
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 44.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 44.1
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 1.1e-06 56.6 68 35.3
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.5e-06 56.2 68 44.1
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.5e-06 56.2 68 44.1
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.5e-06 56.2 68 44.1
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 1.5e-06 56.2 68 44.1
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 1.9e-06 55.8 68 42.6
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 1.9e-06 55.8 68 42.6
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 1.9e-06 55.8 68 42.6
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.9e-06 55.8 69 42.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.9e-06 55.8 68 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 3.3e-06 55.1 68 36.8
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 3.3e-06 55.1 68 42.6
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 4.3e-06 54.7 69 40.6
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 5.6e-06 54.3 68 39.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 7.3e-06 53.9 68 41.2


User provided reference genes

Program Settings