Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MapolyY_A0030 Marchantia polymorpha HOM05D001604 ORTHO05D001432 1.9e-92 342.4 164 100.0
Mapoly0098s0046 Marchantia polymorpha HOM05D001604 ORTHO05D001432 1.2e-70 270.0 168 81.0
Aqoxy2G03301 Aquilegia oxysepala HOM05D001604 ORTHO05D001432 8.9e-18 94.4 169 32.5
PSO170G2885 Papaver somniferum HOM05D001604 ORTHO05D001432 9.2e-15 84.3 170 28.2
TWI81G0152 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 2.7e-14 82.8 165 30.9
PSO302G0086 Papaver somniferum HOM05D001604 ORTHO05D001432 3.5e-14 82.4 170 29.4
CSS0039244 Camellia sinensis var. sinensis HOM05D001604 ORTHO05D001432 1.3e-13 80.5 173 26.6
Sc05g0004930 Simmondsia chinensis HOM05D001604 ORTHO05D001432 2.3e-13 79.7 172 29.1
Lj3g0022326 Lotus japonicus HOM05D001604 ORTHO05D001432 6.6e-13 78.2 164 28.7
Lalb_Chr10g0097001 Lupinus albus HOM05D001604 ORTHO05D001432 6.6e-13 78.2 164 27.4
unitig_88.g27617 Utricularia gibba HOM05D001604 ORTHO05D001432 8.7e-13 77.8 171 29.8
Atru.chr5.489 Acer truncatum HOM05D001604 ORTHO05D001432 1.1e-12 77.4 163 27.0
Duzib138G0897 Durio zibethinus HOM05D001604 ORTHO05D001432 1.1e-12 77.4 163 30.7
EL10Ac1g00421 Beta vulgaris HOM05D001604 ORTHO05D001432 1.9e-12 76.6 164 31.1
CDE05G3234 Ceratophyllum demersum HOM05D001604 ORTHO05D001432 1.9e-12 76.6 171 28.7
PGR031G3769 Punica granatum HOM05D001604 ORTHO05D001432 1.9e-12 76.6 164 28.7
PGR042G1989 Punica granatum HOM05D001604 ORTHO05D001432 2.5e-12 76.3 164 28.7
VMungo0331G1360 Vigna mungo HOM05D001604 ORTHO05D001432 3.3e-12 75.9 165 27.9
Actinidia02003 Actinidia chinensis HOM05D001604 ORTHO05D001432 4.3e-12 75.5 165 27.3
Lalb_Chr05g0224731 Lupinus albus HOM05D001604 ORTHO05D001432 4.3e-12 75.5 162 27.8
RcHm_v2.0_Chr1g0355211 Rosa chinensis HOM05D001604 ORTHO05D001432 4.3e-12 75.5 165 27.9
TWI15G0365 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 4.3e-12 75.5 166 28.3
MD01G1060200 Malus domestica HOM05D001604 ORTHO05D001432 5.6e-12 75.1 166 26.5
Phvul.010G098500 Phaseolus vulgaris HOM05D001604 ORTHO05D001432 5.6e-12 75.1 165 26.1
CiPaw.07G092400 Carya illinoinensis HOM05D001604 ORTHO05D001432 7.3e-12 74.7 170 28.8
vmacro11362 Vaccinium macrocarpon HOM05D001604 ORTHO05D001432 7.3e-12 74.7 166 27.7
CiPaw.01G060900 Carya illinoinensis HOM05D001604 ORTHO05D001432 9.6e-12 74.3 164 26.8
Solyc08g081140.4 Solanum lycopersicum HOM05D001604 ORTHO05D001432 9.6e-12 74.3 170 27.1
Lalb_Chr16g0390021 Lupinus albus HOM05D001604 ORTHO05D001432 1.2e-11 73.9 161 28.6
MD07G1137500 Malus domestica HOM05D001604 ORTHO05D001432 1.2e-11 73.9 167 26.3
QL12p022039 Quercus lobata HOM05D001604 ORTHO05D001432 1.2e-11 73.9 171 30.4
arahy.Tifrunner.gnm1.ann1.1BTX43 Arachis hypogaea HOM05D001604 ORTHO05D001432 1.6e-11 73.6 161 29.8
Sopen08g029440 Solanum pennellii HOM05D001604 ORTHO05D001432 1.6e-11 73.6 170 27.1
Glyma.03G009500 Glycine max HOM05D001604 ORTHO05D001432 2.1e-11 73.2 167 27.5
Thhalv10027709m.g Eutrema salsugineum HOM05D001604 ORTHO05D001432 2.8e-11 72.8 169 26.0
Manes.01G059300 Manihot esculenta HOM05D001604 ORTHO05D001432 2.8e-11 72.8 164 29.9
PGR119G1112 Punica granatum HOM05D001604 ORTHO05D001432 2.8e-11 72.8 169 28.4
Hund27278 Selenicereus undatus HOM05D001604 ORTHO05D001432 2.8e-11 72.8 163 28.8
FvH4_7g14230 Fragaria vesca HOM05D001604 ORTHO05D001432 3.6e-11 72.4 165 27.3
Actinidia27380 Actinidia chinensis HOM05D001604 ORTHO05D001432 4.7e-11 72.0 163 27.0
Oeu047878.1 Olea europaea HOM05D001604 ORTHO05D001432 4.7e-11 72.0 165 30.9
arahy.Tifrunner.gnm1.ann1.GWZ248 Arachis hypogaea HOM05D001604 ORTHO05D001432 6.2e-11 71.6 170 27.6
CsaV3_6G037080 Cucumis sativus L. HOM05D001604 ORTHO05D001432 6.2e-11 71.6 172 27.3
AT5G41315 Arabidopsis thaliana HOM05D001604 ORTHO05D001432 8.1e-11 71.2 169 27.8
AL7G48130 Arabidopsis lyrata HOM05D001604 ORTHO05D001432 1.1e-10 70.9 169 27.8
Carub.0002s0120 Capsella rubella HOM05D001604 ORTHO05D001432 1.1e-10 70.9 166 27.7
Sc01g0003410 Simmondsia chinensis HOM05D001604 ORTHO05D001432 1.1e-10 70.9 164 26.2
CANSAT21G1225 Cannabis sativa HOM05D001604 ORTHO05D001432 1.4e-10 70.5 164 27.4
Manes.01G257200 Manihot esculenta HOM05D001604 ORTHO05D001432 1.4e-10 70.5 159 26.4
Aqoxy1G03911 Aquilegia oxysepala HOM05D001604 ORTHO05D001432 1.8e-10 70.1 126 31.0
CARHR213010 Cardamine hirsuta HOM05D001604 ORTHO05D001432 1.8e-10 70.1 169 27.2
THA.LOC104814104 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 1.8e-10 70.1 168 26.2
Carub.0007s3418 Capsella rubella HOM05D001604 ORTHO05D001432 2.4e-10 69.7 173 27.2
VMungo0251G3445 Vigna mungo HOM05D001604 ORTHO05D001432 2.4e-10 69.7 160 26.9
THA.LOC104823586 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 3.1e-10 69.3 165 26.7
Aa31LG1G29520 Aethionema arabicum HOM05D001604 ORTHO05D001432 4.0e-10 68.9 172 29.1
BcaC04g22694 Brassica carinata HOM05D001604 ORTHO05D001432 4.0e-10 68.9 166 28.3
A09p13790 Brassica napus HOM05D001604 ORTHO05D001432 4.0e-10 68.9 166 28.3
C09p16460 Brassica napus HOM05D001604 ORTHO05D001432 4.0e-10 68.9 166 28.3
BolC9t54557H Brassica oleracea HOM05D001604 ORTHO05D001432 4.0e-10 68.9 166 28.3
DCAR_005631 Daucus carota HOM05D000567 ORTHO05D000767 4.0e-10 68.9 152 28.9
Migut.E01090 Erythranthe guttata HOM05D001604 ORTHO05D001432 4.0e-10 68.9 164 28.0
Aa31LG9G620 Aethionema arabicum HOM05D001604 ORTHO05D001432 5.2e-10 68.6 166 26.5
TAR629G3280 Trochodendron aralioides HOM05D001604 ORTHO05D001432 5.2e-10 68.6 164 26.8
Aqoxy1G03913 Aquilegia oxysepala HOM05D001604 ORTHO05D001432 6.9e-10 68.2 149 26.8
BraA09t37031Z Brassica rapa HOM05D001604 ORTHO05D001432 6.9e-10 68.2 166 28.3
BcaB07g31558 Brassica carinata HOM05D001604 ORTHO05D001432 9.0e-10 67.8 166 27.7
CAN.G774.51 Capsicum annuum HOM05D001604 ORTHO05D001432 9.0e-10 67.8 167 28.7
Cpa.g.sc141.19 Carica papaya HOM05D000567 ORTHO05D000767 9.0e-10 67.8 156 27.6
QL08p048868 Quercus lobata HOM05D001604 ORTHO05D001432 9.0e-10 67.8 166 27.1
THA.LOC104801584 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 1.2e-09 67.4 177 24.9
THA.LOC104817999 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 1.2e-09 67.4 164 26.2
AT1G63650 Arabidopsis thaliana HOM05D001604 ORTHO05D001432 1.5e-09 67.0 166 27.1
BcaB07g31407 Brassica carinata HOM05D001604 ORTHO05D001432 1.5e-09 67.0 166 26.5
Glyma.05G208300 Glycine max HOM05D001604 ORTHO05D001432 1.5e-09 67.0 165 25.5
Aa31LG2G860 Aethionema arabicum HOM05D001604 ORTHO05D001432 2.0e-09 66.6 167 26.3
CARHR047690 Cardamine hirsuta HOM05D001604 ORTHO05D001432 2.0e-09 66.6 166 26.5
Thhalv10023356m.g Eutrema salsugineum HOM05D001604 ORTHO05D001432 2.0e-09 66.6 166 27.1
FAN03G1456 Fragaria x ananassa HOM05D001604 ORTHO05D001432 2.0e-09 66.6 165 27.9
Nitab4.5_0016536g0010 Nicotiana tabacum HOM05D001604 ORTHO05D001432 2.6e-09 66.2 166 26.5
AUR62004352 Chenopodium quinoa HOM05D003257 ORTHO05D003749 4.4e-09 65.5 140 32.1
Ciclev10019338m.g Citrus clementina HOM05D001604 ORTHO05D001432 4.4e-09 65.5 166 27.1
FAN01G1009 Fragaria x ananassa HOM05D001604 ORTHO05D001432 4.4e-09 65.5 165 27.3
FAN06G0344 Fragaria x ananassa HOM05D001604 ORTHO05D001432 4.4e-09 65.5 165 27.3
FAN06G2348 Fragaria x ananassa HOM05D001604 ORTHO05D001432 4.4e-09 65.5 165 27.3
Cfa012225 Carpinus fangiana HOM05D001604 ORTHO05D001432 5.8e-09 65.1 164 28.0
Glyma.08G014900 Glycine max HOM05D001604 ORTHO05D001432 5.8e-09 65.1 161 26.7
BcaC04g22498 Brassica carinata HOM05D001604 ORTHO05D001432 7.6e-09 64.7 166 25.9
A09p15400 Brassica napus HOM05D001604 ORTHO05D001432 7.6e-09 64.7 166 25.9
BolC9t54763H Brassica oleracea HOM05D001604 ORTHO05D001432 7.6e-09 64.7 166 25.9
BraA09t37182Z Brassica rapa HOM05D001604 ORTHO05D001432 7.6e-09 64.7 166 25.9
C09p18670 Brassica napus HOM05D001604 ORTHO05D001432 9.9e-09 64.3 166 25.9
Zm00001eb429330 Zea mays HOM05D001604 ORTHO05D001432 9.9e-09 64.3 159 25.8
Sp2g01010 Schrenkiella parvula HOM05D001604 ORTHO05D001432 1.3e-08 63.9 166 28.3
DCAR_008270 Daucus carota HOM05D000567 ORTHO05D000767 1.7e-08 63.5 158 27.2
Haze_15498 Corylus avellana HOM05D001604 ORTHO05D001432 2.9e-08 62.8 177 26.0
Lsat_1_v5_gn_3_17861 Lactuca sativa HOM05D000567 ORTHO05D000767 2.9e-08 62.8 157 28.7
BcaB01g02162 Brassica carinata HOM05D001604 ORTHO05D001432 4.9e-08 62.0 175 26.9
Carub.0006s3678 Capsella rubella HOM05D001604 ORTHO05D001432 6.4e-08 61.6 176 24.4
Hma1.2p1_0309F.1_g120560 Hydrangea macrophylla HOM05D000567 ORTHO05D000767 8.4e-08 61.2 162 25.3
HanXRQChr05g0154351 Helianthus annuus HOM05D000567 ORTHO05D000767 1.1e-07 60.8 166 27.1
arahy.Tifrunner.gnm1.ann1.SWJY0L Arachis hypogaea HOM05D001604 ORTHO05D001432 1.4e-07 60.5 141 29.1
unitig_22.g5501 Utricularia gibba HOM05D000567 ORTHO05D000767 1.4e-07 60.5 156 26.3
BraA09t35715Z Brassica rapa HOM05D001604 ORTHO05D001432 1.9e-07 60.1 178 23.0
CDE08G0583 Ceratophyllum demersum HOM05D001604 ORTHO05D001432 1.9e-07 60.1 171 25.1
Gohir.A11G099900 Gossypium hirsutum HOM05D000567 ORTHO05D000767 1.9e-07 60.1 151 25.2
Gohir.A08G123300 Gossypium hirsutum HOM05D000567 ORTHO05D000767 3.2e-07 59.3 150 27.3
Gohir.D08G144700 Gossypium hirsutum HOM05D000567 ORTHO05D000767 3.2e-07 59.3 145 28.3
Gorai.004G149500 Gossypium raimondii HOM05D000567 ORTHO05D000767 3.2e-07 59.3 145 28.3
Os07g0211500 Oryza sativa ssp. japonica HOM05D001604 ORTHO05D001432 4.2e-07 58.9 181 24.9
TAR636G0953 Trochodendron aralioides HOM05D000567 ORTHO05D000767 4.2e-07 58.9 150 28.0
HanXRQChr06g0165851 Helianthus annuus HOM05D001604 ORTHO05D001432 5.4e-07 58.5 172 22.7
ECA233G5522 Erigeron canadensis HOM05D000567 ORTHO05D000767 1.2e-06 57.4 153 26.1
Peaxi162Scf00767g00043 Petunia axillaris HOM05D000567 ORTHO05D000767 1.2e-06 57.4 171 25.7
Atru.chr5.745 Acer truncatum HOM05D000567 ORTHO05D000767 1.6e-06 57.0 156 23.7
DCAR_000616 Daucus carota HOM05D001604 ORTHO05D001432 1.6e-06 57.0 140 25.0
Sopen08g001070 Solanum pennellii HOM05D000567 ORTHO05D000767 1.6e-06 57.0 164 26.8
BcaC04g24167 Brassica carinata HOM05D001604 ORTHO05D001432 2.1e-06 56.6 81 33.3
BolC9t52977H Brassica oleracea HOM05D001604 ORTHO05D001432 2.1e-06 56.6 81 33.3
Nitab4.5_0000307g0240 Nicotiana tabacum HOM05D000567 ORTHO05D000767 2.1e-06 56.6 151 25.2
COL.COLO4_06221 Corchorus olitorius HOM05D000567 ORTHO05D000767 2.7e-06 56.2 161 24.8
FAN06G1790 Fragaria x ananassa HOM05D000567 ORTHO05D000767 3.5e-06 55.8 165 23.0
DCAR_024963 Daucus carota HOM05D000567 ORTHO05D000767 6.0e-06 55.1 167 25.7
PGSC0003DMG400018332 Solanum tuberosum HOM05D000567 ORTHO05D000767 6.0e-06 55.1 162 27.2
MELO3C031122.2 Cucumis melo HOM05D001604 ORTHO05D001432 7.8e-06 54.7 151 25.2


User provided reference genes

Program Settings