Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 4.3e-133 478.0 247 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.2e-34 151.0 172 51.2
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.6e-34 149.1 180 47.8
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 4.9e-20 102.4 126 49.2
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 7.4e-16 88.6 196 36.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 8.2e-15 85.1 159 37.1
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.1e-14 84.7 173 36.4
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.8e-14 84.0 157 36.3
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 4.1e-14 82.8 160 36.9
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.1e-14 82.8 147 38.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 5.3e-14 82.4 158 36.7
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 6.9e-14 82.0 159 35.8
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 6.9e-14 82.0 170 32.9
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 9.0e-14 81.6 170 32.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.2e-13 81.3 157 34.4
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.2e-13 81.3 154 35.7
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.2e-13 81.3 146 38.4
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.2e-13 81.3 157 35.7
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 1.2e-13 81.3 156 37.2
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.0e-13 80.5 157 35.7
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.0e-13 80.5 170 31.8
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.0e-13 80.5 170 31.8
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.6e-13 80.1 146 34.2
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.6e-13 80.1 146 36.3
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.6e-13 80.1 120 41.7
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 3.4e-13 79.7 146 36.3
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 4.5e-13 79.3 158 33.5
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 4.5e-13 79.3 117 41.9
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 4.5e-13 79.3 157 36.9
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 5.9e-13 79.0 157 35.0
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.0e-12 78.2 146 35.6
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.3e-12 77.8 165 35.2
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.7e-12 77.4 157 33.8
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.2e-12 77.0 146 36.3
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 2.9e-12 76.6 157 35.0
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.9e-12 76.6 204 31.9
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 3.8e-12 76.3 146 33.6
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 3.8e-12 76.3 146 32.9
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.8e-12 76.3 146 34.9
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 5.0e-12 75.9 157 34.4
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 5.0e-12 75.9 146 33.6
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 6.5e-12 75.5 146 33.6
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 8.4e-12 75.1 146 34.2
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.1e-11 74.7 165 32.1
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.1e-11 74.7 168 33.3
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.1e-11 74.7 169 33.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.4e-11 74.3 157 33.1
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.4e-11 74.3 158 31.0
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.9e-11 73.9 194 30.4
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.9e-11 73.9 194 30.9
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.9e-11 73.9 194 30.4
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.9e-11 73.9 162 34.6
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.9e-11 73.9 116 37.9
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.9e-11 73.9 158 31.0
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.9e-11 73.9 158 31.0
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.9e-11 73.9 159 35.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.9e-11 73.9 146 34.2
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.5e-11 73.6 146 32.9
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 2.5e-11 73.6 146 32.2
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 2.5e-11 73.6 147 36.7
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 2.5e-11 73.6 147 36.7
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.2e-11 73.2 155 32.3
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 3.2e-11 73.2 155 34.2
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 4.2e-11 72.8 190 28.4
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 5.5e-11 72.4 173 35.8
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 7.2e-11 72.0 159 32.1
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 7.2e-11 72.0 158 36.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 7.2e-11 72.0 158 33.5
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.2e-11 72.0 172 33.1
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 7.2e-11 72.0 158 34.2
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.3e-11 71.6 185 31.4
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 9.3e-11 71.6 146 33.6
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.2e-10 71.2 185 31.4
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.2e-10 71.2 185 31.4
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.2e-10 71.2 185 31.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.2e-10 71.2 146 35.6
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.7e-10 70.1 146 34.9
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 3.5e-10 69.7 147 32.0
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.5e-10 69.7 168 30.4
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 3.5e-10 69.7 157 31.8
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.6e-10 69.3 185 31.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 4.6e-10 69.3 158 32.3
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.9e-10 68.6 153 34.0
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 7.9e-10 68.6 146 34.2
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-09 67.8 188 30.3
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.3e-09 67.8 159 31.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 1.8e-09 67.4 148 33.8
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.8e-09 67.4 158 34.2
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.0e-09 66.6 143 31.5
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 3.9e-09 66.2 126 33.3
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 3.9e-09 66.2 157 30.6
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.9e-09 66.2 147 34.0
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.9e-09 66.2 147 31.3
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 5.1e-09 65.9 156 31.4
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.1e-09 65.9 156 31.4
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 5.1e-09 65.9 146 30.1
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 5.1e-09 65.9 146 30.1
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 5.1e-09 65.9 146 30.1
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 5.1e-09 65.9 146 30.1
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 5.1e-09 65.9 146 30.1
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 6.7e-09 65.5 146 32.2
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 6.7e-09 65.5 148 30.4
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 8.7e-09 65.1 89 40.4
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 8.7e-09 65.1 136 33.8
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.1e-08 64.7 157 29.9
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.1e-08 64.7 154 31.2
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.5e-08 64.3 185 30.8
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.9e-08 63.9 147 32.7
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 4.3e-08 62.8 154 28.6
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 5.7e-08 62.4 117 34.2
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 7.4e-08 62.0 157 29.9
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 7.4e-08 62.0 191 27.7
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.4e-06 57.8 119 31.1
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.4e-06 57.0 117 33.3
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.1e-06 56.2 131 31.3


User provided reference genes

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