Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly4038s0001 Marchantia polymorpha HOM05D007167 ORTHO05D001679 7.6e-32 139.8 67 100.0
arahy.Tifrunner.gnm1.ann1.ET488V Arachis hypogaea HOM05D007167 ORTHO05D001679 3.3e-27 124.4 67 91.0
Psat0s8399g0040 Pisum sativum HOM05D007167 ORTHO05D001679 5.6e-27 123.6 67 91.0
Rhsim05G0123600 Rhododendron simsii HOM05D016882 ORTHO05D001745 9.6e-27 122.9 67 89.6
Lj5g0012521 Lotus japonicus HOM05D007167 ORTHO05D001679 1.6e-26 122.1 67 89.6
Lj5g0016692 Lotus japonicus HOM05D007167 ORTHO05D001679 1.6e-26 122.1 67 89.6
Lj6g0017867 Lotus japonicus HOM05D007167 ORTHO05D001679 1.6e-26 122.1 67 89.6
LjContig00006g0001730 Lotus japonicus HOM05D007167 ORTHO05D001679 1.6e-26 122.1 67 89.6
unitig_145.g32368 Utricularia gibba HOM05D007167 ORTHO05D001679 2.8e-26 121.3 67 89.6
unitig_668.g29633 Utricularia gibba HOM05D007167 ORTHO05D001679 2.8e-26 121.3 67 89.6
Atru.chr10.38 Acer truncatum HOM05D007167 ORTHO05D001679 1.1e-25 119.4 67 88.1
EL10Ac2g03014 Beta vulgaris HOM05D007167 ORTHO05D001679 1.4e-25 119.0 66 84.8
LjContig00547g0012562 Lotus japonicus HOM05D007167 ORTHO05D001679 9.0e-25 116.3 63 88.9
Medtr0021s0120 Medicago truncatula HOM05D007167 ORTHO05D010211 8.4e-23 109.8 59 89.8
unitig_245.g35372 Utricularia gibba HOM05D007167 ORTHO05D001679 1.1e-22 109.4 58 91.4
Sc12g0000010 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 7.9e-21 103.2 57 86.0
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
Sc14g0004040 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc14g0004080 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
Sc14g0004280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc14g0004310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
Sc18g0006340 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0000500 Simmondsia chinensis HOM05D013320 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
ScUNg0000880 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0000980 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
ScUNg0001050 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.9e-21 103.2 57 86.0
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 7.9e-21 103.2 57 86.0
ScUNg0001460 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.9e-21 103.2 57 86.0
EL10Ac5g11394 Beta vulgaris HOM05D007167 ORTHO05D000922 1.0e-20 102.8 59 84.7
CsaV3_UNG240550 Cucumis sativus L. HOM05D007167 ORTHO05D001679 3.6e-18 94.4 48 91.7
Sc02g0009430 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.6e-18 94.4 49 89.8
arahy.Tifrunner.gnm1.ann1.XTZD9Y Arachis hypogaea HOM05D007167 ORTHO05D001679 1.4e-17 92.4 47 91.5
Thecc.07G180900 Theobroma cacao HOM05D007167 ORTHO05D001679 1.4e-17 92.4 58 77.6
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 1.7e-15 85.5 55 76.4
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 1.7e-15 85.5 55 76.4
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 1.7e-15 85.5 55 76.4
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 1.7e-15 85.5 55 76.4
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 1.7e-15 85.5 55 76.4
EL10As19g24181 Beta vulgaris HOM05D007167 ORTHO05D001679 2.2e-15 85.1 41 95.1
Sc06g0002460 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-15 84.3 59 72.9
Sed0028154 Sechium edule HOM05D007167 ORTHO05D001679 9.3e-14 79.7 38 94.7
CBR_g28706 Chara braunii HOM05D010018 ORTHO05D003704 2.7e-13 78.2 45 80.0
QL93p0473_0011 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-11 72.4 56 67.9
QL93p0473_0019 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-11 72.4 56 67.9
QL93p0473_0029 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 52 69.2
QL93p0539_0002 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 52 69.2
QL93p0853_0005 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 52 69.2
MCO14G190 Micromonas commoda HOM05D007167 ORTHO05D001679 9.6e-11 69.7 37 83.8
MCO14G191 Micromonas commoda HOM05D007167 ORTHO05D001679 9.6e-11 69.7 37 83.8
MCO14G192 Micromonas commoda HOM05D007167 ORTHO05D001679 9.6e-11 69.7 37 83.8
TAR408G0001 Trochodendron aralioides HOM05D007167 ORTHO05D001679 2.1e-10 68.6 52 67.3
Sc07g0005250 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.2e-10 67.0 39 79.5
QL93p0943_0001 Quercus lobata HOM05D016732 ORTHO05D001679 1.1e-09 66.2 38 78.9
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 4.2e-06 54.3 38 68.4


User provided reference genes

Program Settings