Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 1.6e-49 199.1 99 100.0
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 9.8e-28 126.7 112 60.7
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 9.5e-23 110.2 76 71.1
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 9.5e-23 110.2 78 70.5
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 3.6e-22 108.2 78 67.9
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 4.7e-22 107.8 78 69.2
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 4.7e-22 107.8 76 68.4
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 4.7e-22 107.8 78 69.2
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.1e-21 106.7 78 67.9
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 1.8e-21 105.9 75 69.3
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 2.3e-21 105.5 78 67.9
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 3.1e-21 105.1 73 71.2
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 3.1e-21 105.1 73 71.2
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 3.1e-21 105.1 73 71.2
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 3.1e-21 105.1 73 71.2
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.1e-21 105.1 78 66.7
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.1e-21 105.1 78 66.7
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 3.1e-21 105.1 75 68.0
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 5.2e-21 104.4 73 69.9
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 1.2e-20 103.2 73 68.5
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 4.4e-20 101.3 77 66.2
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 3.2e-18 95.1 77 64.9
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 9.2e-18 93.6 76 61.8
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 1.1e-15 86.7 128 44.5
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 1.1e-15 86.7 128 44.5
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 1.1e-15 86.7 128 44.5
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 5.6e-15 84.3 110 46.4
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 7.8e-09 63.9 78 48.7
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 7.8e-09 63.9 39 76.9
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 7.8e-09 63.9 39 76.9
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 3.3e-07 58.5 106 34.0


User provided reference genes

Program Settings