Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly1008s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-273 946.0 447 100.0
Mapoly0051s0117 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-237 826.2 437 89.0
Mapoly0051s0116 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.6e-237 825.1 437 88.1
Mapoly0041s0155 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.6e-224 780.8 426 86.4
Mapoly0111s0045 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.1e-218 762.3 438 82.4
Mapoly0102s0057 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.5e-189 664.8 447 74.3
Mapoly0041s0107 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-176 623.2 441 70.1
Mapoly0041s0108 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.0e-172 608.2 423 70.0
Mapoly0041s0153 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.6e-170 603.2 359 80.2
Mapoly0041s0156 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.4e-166 589.3 356 79.2
Mapoly0288s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.2e-143 513.1 397 60.5
Mapoly0288s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.1e-141 506.5 397 59.4
Mapoly0164s0029 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.9e-139 500.0 397 59.4
Mapoly0153s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.3e-139 499.2 424 56.4
Mapoly0273s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.6e-139 498.4 397 59.9
Mapoly0164s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.8e-137 493.4 397 59.2
Mapoly1588s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.2e-137 491.9 399 59.9
Mapoly1684s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.2e-134 482.6 409 57.9
Mapoly0201s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.2e-122 441.8 435 52.9
Mapoly0164s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.0e-121 439.1 438 51.1
Mapoly0215s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.6e-120 436.4 419 52.0
Mapoly2704s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-118 431.0 328 61.9
Mapoly0288s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.4e-115 418.3 439 49.2
Mapoly0279s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.7e-114 416.0 426 50.9
Mapoly0114s0062 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-113 414.5 427 50.1
Mapoly0304s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.0e-112 410.2 423 49.9
Mapoly2454s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.3e-111 407.5 307 61.9
Mapoly0215s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.2e-110 402.9 424 49.5
Mapoly0304s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.2e-106 388.7 426 47.4
Mapoly0304s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-102 377.5 451 46.3
Mapoly0169s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.9e-93 345.1 466 42.3
Mapoly0041s0106 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.7e-76 288.9 193 68.9
Mapoly0604s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-73 281.6 323 48.6
Mapoly0041s0157 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.0e-73 278.9 270 53.3
Mapoly0041s0154 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-69 268.1 297 50.8
Mapoly0215s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.6e-35 154.1 151 49.7
Mapoly0041s0105 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-33 148.3 157 54.8
Mapoly0604s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.9e-28 129.0 136 50.0
Mapoly0041s0152 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-27 128.3 79 74.7
Mapoly0240s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.4e-27 126.7 104 51.0
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-23 115.5 381 27.3
Mapoly0093s0087 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-22 111.7 288 29.9
Mapoly0070s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.6e-21 107.1 87 55.2
Mapoly0004s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.1e-20 104.0 299 29.4
Mapoly0144s0012 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.9e-20 102.4 287 32.8
Mapoly0317s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-19 101.7 306 28.8
Mapoly0169s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-17 95.1 177 36.7
Mapoly0004s0025 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.9e-17 94.7 274 26.3
Mapoly0169s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.4e-17 93.2 153 38.6
Mapoly0273s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.1e-17 92.8 116 44.0
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 7.8e-16 89.4 302 25.5
Mapoly0060s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.8e-16 89.4 299 27.4
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.6e-14 83.2 256 25.8
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 5.3e-12 76.6 232 30.6
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 9.0e-12 75.9 248 26.6
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.3e-10 72.0 297 24.6
Mapoly0063s0068 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.9e-10 70.9 233 25.8
AagrBONN_evm.TU.Sc2ySwM_368.3053 Anthoceros agrestis HOM05D005500 ORTHO05D006906 1.9e-09 68.2 256 26.2
Zm00001eb237930 Zea mays HOM05D003005 ORTHO05D004170 1.9e-09 68.2 244 29.5
Mapoly0020s0066 Marchantia polymorpha HOM05D004302 ORTHO05D010190 2.4e-09 67.8 284 22.9
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.2e-09 67.4 240 24.6
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 5.4e-09 66.6 248 24.2
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.4e-09 66.6 224 27.7
PGR042G0166 Punica granatum HOM05D000007 ORTHO05D000039 5.4e-09 66.6 378 23.0
Migut.N01573 Erythranthe guttata HOM05D003005 ORTHO05D004170 7.1e-09 66.2 220 26.8
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 7.1e-09 66.2 281 25.6
Cfa014275 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.6e-08 65.1 264 23.1
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 1.6e-08 65.1 243 27.6
MD07G1142500 Malus domestica HOM05D003005 ORTHO05D004170 3.5e-08 63.9 246 26.8
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 3.5e-08 63.9 273 23.8
BcaB06g28593 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-07 62.4 278 25.9
Haze_12720 Corylus avellana HOM05D000007 ORTHO05D000521 1.0e-07 62.4 261 23.0
Os02g0260200 Oryza sativa ssp. japonica HOM05D003005 ORTHO05D004170 1.0e-07 62.4 245 25.7
Pp3c8_10900 Physcomitrium patens HOM05D004302 ORTHO05D004939 1.7e-07 61.6 245 24.5
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 2.3e-07 61.2 220 28.2
Aqoxy7G00225 Aquilegia oxysepala HOM05D003005 ORTHO05D004170 5.1e-07 60.1 229 27.1
PSO170G2625 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-07 60.1 267 23.6
Mapoly0070s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.6e-07 59.7 58 51.7
TAR629G3351 Trochodendron aralioides HOM05D003005 ORTHO05D004170 6.6e-07 59.7 251 24.3
Migut.B01816 Erythranthe guttata HOM05D003005 ORTHO05D004170 8.7e-07 59.3 227 26.9
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.1e-06 58.9 238 24.8
arahy.Tifrunner.gnm1.ann1.HVK0R9 Arachis hypogaea HOM05D003005 ORTHO05D004170 1.9e-06 58.2 252 24.6
arahy.Tifrunner.gnm1.ann1.WVBE1P Arachis hypogaea HOM05D003005 ORTHO05D004170 1.9e-06 58.2 252 24.6
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.3e-06 57.4 258 25.2
Eucgr.J00721 Eucalyptus grandis HOM05D000007 ORTHO05D003666 5.6e-06 56.6 214 25.2
Potri.001G224200 Populus trichocarpa HOM05D000007 ORTHO05D000521 5.6e-06 56.6 259 21.2
Rhsim07G0008700 Rhododendron simsii HOM05D003005 ORTHO05D004170 7.3e-06 56.2 223 26.9


User provided reference genes

Program Settings