Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 8.3e-235 816.6 401 100.0
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 8.1e-121 438.0 345 67.0
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.8e-120 434.9 351 66.4
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 4.8e-89 332.4 323 56.3
Mapoly0120s0019 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.9e-69 267.3 348 46.3
Mapoly0067s0038 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.1e-53 214.9 287 43.9
Mapoly1060s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.4e-53 214.5 337 40.1
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.2e-53 213.4 339 39.8
Mapoly0893s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 9.4e-53 211.8 335 40.0
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.6e-52 211.1 267 43.1
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 7.9e-52 208.8 340 39.1
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.1e-50 204.9 277 44.0
Mapoly0062s0120 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.0e-46 191.8 335 37.9
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.7e-41 173.3 261 36.0
Mapoly0041s0095 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.0e-38 165.2 284 36.3
Mapoly0062s0059 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.8e-32 144.4 245 37.6
Mapoly0119s0056 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.8e-32 144.4 301 34.2
Mapoly0032s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 5.4e-32 142.9 284 34.5
Mapoly0053s0005 Marchantia polymorpha HOM05D011080 ORTHO05D000239 7.0e-32 142.5 292 31.5
Mapoly0010s0128 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.0e-30 138.7 303 33.3
Mapoly0064s0096 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.1e-29 135.2 192 39.1
Mapoly0071s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.9e-29 134.4 299 33.4
Mapoly0016s0166 Marchantia polymorpha HOM05D004348 ORTHO05D000239 4.2e-29 133.3 186 39.8
Mapoly0110s0039 Marchantia polymorpha HOM05D011080 ORTHO05D000239 9.5e-29 132.1 307 34.2
Mapoly0080s0029 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.6e-28 130.2 281 31.0
Mapoly0067s0036 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.8e-27 127.9 286 31.5
Mapoly0016s0164 Marchantia polymorpha HOM05D004348 ORTHO05D000239 4.4e-26 123.2 185 38.4
Mapoly0108s0045 Marchantia polymorpha HOM05D020945 ORTHO05D000713 3.7e-25 120.2 307 31.3
Mapoly0108s0037 Marchantia polymorpha HOM05D029023 ORTHO05D030122 4.1e-24 116.7 271 31.0
Mapoly0555s0001 Marchantia polymorpha HOM05D029023 ORTHO05D030122 1.2e-23 115.2 286 30.1
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 2.0e-23 114.4 306 28.1
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 2.0e-23 114.4 306 28.1
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 2.7e-23 114.0 277 30.0
Mapoly0147s0041 Marchantia polymorpha HOM05D000242 ORTHO05D000700 3.5e-23 113.6 293 32.1
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 3.5e-23 113.6 315 28.9
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 4.5e-23 113.2 299 27.4
Mapoly0397s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253181 4.5e-23 113.2 291 31.3
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 4.5e-23 113.2 306 27.8
Mapoly0074s0030 Marchantia polymorpha HOM05D011080 ORTHO05D254173 5.9e-23 112.8 311 32.8
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 5.9e-23 112.8 286 28.3
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 7.8e-23 112.5 291 28.9
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.0e-22 112.1 291 28.9
Mapoly0052s0114 Marchantia polymorpha HOM05D029023 ORTHO05D030122 1.3e-22 111.7 272 30.9
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.7e-22 111.3 295 27.8
Mapoly0020s0126 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.7e-22 111.3 297 30.6
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 2.3e-22 110.9 295 28.8
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 2.9e-22 110.5 296 27.7
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 3.8e-22 110.2 306 27.1
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 6.6e-22 109.4 318 26.4
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 8.6e-22 109.0 368 26.9
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 1.1e-21 108.6 368 26.6
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 1.1e-21 108.6 368 26.6
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 1.1e-21 108.6 368 26.6
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 1.5e-21 108.2 298 26.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 1.9e-21 107.8 278 29.5
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.5e-21 107.5 297 27.3
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 3.3e-21 107.1 277 27.8
Mapoly0147s0044 Marchantia polymorpha HOM05D000242 ORTHO05D000700 3.3e-21 107.1 284 28.9
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 3.3e-21 107.1 272 27.6
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 4.3e-21 106.7 290 27.6
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 4.3e-21 106.7 301 26.2
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 4.3e-21 106.7 278 28.4
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 4.3e-21 106.7 278 28.4
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 4.3e-21 106.7 295 26.8
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 5.6e-21 106.3 272 27.6
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 5.6e-21 106.3 288 28.1
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 5.6e-21 106.3 280 27.5
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 5.6e-21 106.3 311 26.7
Mapoly0346s0002 Marchantia polymorpha HOM05D020945 ORTHO05D254421 5.6e-21 106.3 283 28.3
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 5.6e-21 106.3 304 28.3
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 7.3e-21 105.9 322 26.4
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 7.3e-21 105.9 278 28.4
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 7.3e-21 105.9 289 28.0
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 7.3e-21 105.9 273 28.2
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 7.3e-21 105.9 273 28.2
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 9.5e-21 105.5 293 26.6
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 9.5e-21 105.5 292 27.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 9.5e-21 105.5 278 28.1
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 9.5e-21 105.5 303 27.4
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 1.2e-20 105.1 291 28.9
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.2e-20 105.1 289 27.3
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 1.6e-20 104.8 293 27.0
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 1.6e-20 104.8 274 28.1
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 1.6e-20 104.8 291 27.8
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 1.6e-20 104.8 275 27.6
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 2.1e-20 104.4 299 27.1
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.1e-20 104.4 322 28.0
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 2.1e-20 104.4 272 28.7
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 2.1e-20 104.4 272 29.4
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 2.1e-20 104.4 275 28.0
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 2.8e-20 104.0 298 28.2
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 3.6e-20 103.6 272 29.8
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 4.7e-20 103.2 273 27.8
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 4.7e-20 103.2 273 27.8
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 4.7e-20 103.2 275 27.3
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 4.7e-20 103.2 296 27.7
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 6.1e-20 102.8 274 28.5
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 8.0e-20 102.4 287 27.2
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 8.0e-20 102.4 274 28.1
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 8.0e-20 102.4 299 26.8
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 1.4e-19 101.7 273 28.2
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.4e-19 101.7 290 28.6
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.4e-19 101.7 272 27.9
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.8e-19 101.3 285 28.4
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 2.3e-19 100.9 275 26.9
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.3e-19 100.9 243 29.2
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 3.0e-19 100.5 296 26.4
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.0e-19 100.5 288 26.7
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 5.2e-19 99.8 277 27.4
Mapoly0147s0004 Marchantia polymorpha HOM05D000242 ORTHO05D000700 5.2e-19 99.8 284 27.5
Mapoly0147s0002 Marchantia polymorpha HOM05D020945 ORTHO05D251377 6.8e-19 99.4 280 29.6
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 8.9e-19 99.0 278 28.1
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 8.9e-19 99.0 287 25.8
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.2e-18 98.6 272 27.2
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.2e-18 98.6 286 26.6
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 2.0e-18 97.8 265 28.3
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 3.4e-18 97.1 272 27.9
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 4.4e-18 96.7 284 26.8
Mapoly0116s0050 Marchantia polymorpha HOM05D011080 ORTHO05D252286 7.5e-18 95.9 286 27.3
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 7.5e-18 95.9 296 26.0
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 2.2e-17 94.4 277 26.0
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 2.2e-17 94.4 286 25.9
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 8.3e-17 92.4 255 27.8
Mapoly0147s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253211 2.4e-16 90.9 316 25.3
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 3.2e-16 90.5 229 26.2
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 3.5e-15 87.0 264 27.3
Mapoly2448s0001 Marchantia polymorpha HOM05D020945 ORTHO05D251686 3.5e-15 87.0 224 28.1
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 6.6e-14 82.8 227 26.9
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 1.1e-13 82.0 187 29.4
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 1.1e-13 82.0 237 25.7
Pp3c24_4860 Physcomitrium patens HOM05D004348 ORTHO05D000239 1.5e-13 81.6 164 30.5
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 3.3e-13 80.5 314 26.1
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 4.3e-13 80.1 257 26.8
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 4.3e-13 80.1 182 29.7
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.2e-12 78.6 236 26.7
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 1.2e-12 78.6 235 26.4
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 1.6e-12 78.2 183 29.0
Pp3c9_17530 Physcomitrium patens HOM05D031884 ORTHO05D311885 2.1e-12 77.8 271 25.8
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 3.6e-12 77.0 167 30.5
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 3.6e-12 77.0 280 27.5
Mapoly0120s0043 Marchantia polymorpha HOM05D011080 ORTHO05D255325 2.3e-11 74.3 207 29.5
Cre16.g686501 Chlamydomonas reinhardtii HOM05D004348 ORTHO05D006191 5.2e-11 73.2 267 24.3
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 9.8e-10 68.9 203 27.1
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.7e-09 68.2 178 29.8
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 1.3e-06 58.5 135 28.1
Mapoly0016s0165 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.7e-06 58.2 44 61.4


User provided reference genes

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