Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0552s0001 Marchantia polymorpha HOM05D000099 ORTHO05D012354 1.2e-21 105.5 51 100.0
PRCOL_00001094 Prasinoderma coloniale HOM05D000099 ORTHO05D012354 8.1e-10 66.2 40 80.0
PRCOL_00001185 Prasinoderma coloniale HOM05D000099 ORTHO05D012354 8.1e-10 66.2 40 80.0
unitig_783.g29411 Utricularia gibba HOM05D001819 ORTHO05D001730 3.1e-09 64.3 47 66.0
unitig_588.g34766 Utricularia gibba HOM05D001819 ORTHO05D002060 1.5e-08 62.0 44 68.2
CiPaw.05G155100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.0e-08 61.6 41 73.2
CiPaw.15G095400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.0e-08 61.6 41 73.2
CiPaw.15G105300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.0e-08 61.6 41 73.2
Lj5g0002401 Lotus japonicus HOM05D000099 ORTHO05D000205 3.4e-08 60.8 42 71.4
Lj5g0008876 Lotus japonicus HOM05D000099 ORTHO05D000205 3.4e-08 60.8 42 71.4
Lj5g0015933 Lotus japonicus HOM05D001819 ORTHO05D012354 3.4e-08 60.8 42 71.4
Lj5g0026620 Lotus japonicus HOM05D000099 ORTHO05D000205 3.4e-08 60.8 42 71.4
Lj6g0002287 Lotus japonicus HOM05D000099 ORTHO05D000205 3.4e-08 60.8 42 71.4
LjContig00097g0009783 Lotus japonicus HOM05D000099 ORTHO05D000205 3.4e-08 60.8 42 71.4
arahy.Tifrunner.gnm1.ann1.ANC9X6 Arachis hypogaea HOM05D000099 ORTHO05D000205 5.8e-08 60.1 42 71.4
arahy.Tifrunner.gnm1.ann1.I39KNR Arachis hypogaea HOM05D000099 ORTHO05D002060 5.8e-08 60.1 42 71.4
arahy.Tifrunner.gnm1.ann1.TM6EK2 Arachis hypogaea HOM05D000099 ORTHO05D002047 5.8e-08 60.1 42 71.4
CiPaw.05G153600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G153700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G154200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G154300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G154700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G154800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G155300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G155500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G155600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G155800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.05G156100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G094800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G095900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G096900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 41 70.7
CiPaw.15G097500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G097900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G098900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G099900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G100900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G101900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G102900 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103000 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103700 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G103800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G104100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G104300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G104400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G105100 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G105200 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G105400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G106300 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G106400 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G106500 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
CiPaw.15G106600 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.8e-08 60.1 40 72.5
Lj5g0011557 Lotus japonicus HOM05D000099 ORTHO05D000205 5.8e-08 60.1 42 69.0
arahy.Tifrunner.gnm1.ann1.L82LDD Arachis hypogaea HOM05D000099 ORTHO05D000205 7.6e-08 59.7 42 71.4
CiPaw.15G096400 Carya illinoinensis HOM05D000099 ORTHO05D000205 7.6e-08 59.7 39 74.4
Dinv08292 Davidia involucrata HOM05D000099 ORTHO05D012354 7.6e-08 59.7 41 73.2
Dinv17812 Davidia involucrata HOM05D011768 ORTHO05D012354 7.6e-08 59.7 41 73.2
unitig_134.g35510 Utricularia gibba HOM05D000099 ORTHO05D002060 7.6e-08 59.7 47 63.8
Glyma.U007102 Glycine max HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
Medtr0052s0040 Medicago truncatula HOM05D003742 ORTHO05D003742 9.9e-08 59.3 41 70.7
Medtr0052s0080 Medicago truncatula HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
Medtr0052s0100 Medicago truncatula HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
Medtr0052s0140 Medicago truncatula HOM05D003742 ORTHO05D003742 9.9e-08 59.3 41 70.7
Medtr0052s0170 Medicago truncatula HOM05D000099 ORTHO05D010992 9.9e-08 59.3 41 70.7
Medtr0055s0030 Medicago truncatula HOM05D000099 ORTHO05D002060 9.9e-08 59.3 41 70.7
Medtr0055s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
Medtr0055s0120 Medicago truncatula HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 9.9e-08 59.3 41 70.7
CiPaw.15G096000 Carya illinoinensis HOM05D000099 ORTHO05D000205 1.7e-07 58.5 40 70.0
Sopen07g009410 Solanum pennellii HOM05D000691 ORTHO05D000378 1.7e-07 58.5 40 72.5
CiPaw.15G104000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.2e-07 58.2 40 70.0
CiPaw.15G104200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.2e-07 58.2 40 70.0
Glyma.13G012400 Glycine max HOM05D000099 ORTHO05D000205 2.2e-07 58.2 41 68.3
Glyma.13G012900 Glycine max HOM05D003742 ORTHO05D003742 2.2e-07 58.2 41 68.3
arahy.Tifrunner.gnm1.ann1.1C667K Arachis hypogaea HOM05D000099 ORTHO05D002060 2.9e-07 57.8 42 66.7
arahy.Tifrunner.gnm1.ann1.Z4GUSD Arachis hypogaea HOM05D000099 ORTHO05D002060 2.9e-07 57.8 42 69.0
Ca_14815_v3 Cicer arietinum L. HOM05D000099 ORTHO05D003742 2.9e-07 57.8 41 68.3
Medtr0052s0070 Medicago truncatula HOM05D000099 ORTHO05D000205 3.8e-07 57.4 41 68.3
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 3.8e-07 57.4 41 68.3
arahy.Tifrunner.gnm1.ann1.00Z2SH Arachis hypogaea HOM05D000099 ORTHO05D002060 4.9e-07 57.0 42 66.7
CiPaw.15G104800 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CiPaw.15G104900 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CiPaw.15G105600 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CiPaw.15G105800 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CiPaw.15G105900 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CiPaw.15G106200 Carya illinoinensis HOM05D000099 ORTHO05D000205 4.9e-07 57.0 40 70.0
CDE02G0156 Ceratophyllum demersum HOM05D027566 ORTHO05D012354 4.9e-07 57.0 48 62.5
CDE02G1552 Ceratophyllum demersum HOM05D001819 ORTHO05D001730 4.9e-07 57.0 48 62.5
LjContig00092g0008446 Lotus japonicus HOM05D000099 ORTHO05D010992 4.9e-07 57.0 39 71.8
LjContig00475g0017963 Lotus japonicus HOM05D000099 ORTHO05D010992 4.9e-07 57.0 39 71.8
CiPaw.15G105000 Carya illinoinensis HOM05D000099 ORTHO05D000205 8.4e-07 56.2 40 70.0
CiPaw.05G155700 Carya illinoinensis HOM05D000099 ORTHO05D000205 1.1e-06 55.8 40 70.0
Lj2g0010822 Lotus japonicus HOM05D000099 ORTHO05D012354 1.4e-06 55.5 39 66.7
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 1.4e-06 55.5 36 75.0
Lj6g0006246 Lotus japonicus HOM05D000099 ORTHO05D012354 1.4e-06 55.5 36 75.0
Lj6g0027222 Lotus japonicus HOM05D000099 ORTHO05D000205 1.4e-06 55.5 36 75.0
LjContig00006g0015344 Lotus japonicus HOM05D000099 ORTHO05D000205 1.4e-06 55.5 36 75.0
LjContig00371g0023897 Lotus japonicus HOM05D000099 ORTHO05D012354 1.4e-06 55.5 36 75.0
Nn5g27005 Nelumbo nucifera HOM05D003742 ORTHO05D003742 1.4e-06 55.5 40 70.0
Nn5g27029 Nelumbo nucifera HOM05D003742 ORTHO05D003742 1.4e-06 55.5 40 70.0
TPR.G25028 Trifolium pratense HOM05D000099 ORTHO05D012354 1.4e-06 55.5 41 68.3
ECA173G0002 Erigeron canadensis HOM05D000099 ORTHO05D000205 1.9e-06 55.1 40 67.5
ECA173G0003 Erigeron canadensis HOM05D003742 ORTHO05D003742 1.9e-06 55.1 40 67.5
ECA173G0004 Erigeron canadensis HOM05D000099 ORTHO05D000205 1.9e-06 55.1 40 67.5
ECA173G0005 Erigeron canadensis HOM05D000099 ORTHO05D000205 1.9e-06 55.1 40 67.5
ECA226G0004 Erigeron canadensis HOM05D000099 ORTHO05D000205 1.9e-06 55.1 40 67.5
TPR.G27223 Trifolium pratense HOM05D000099 ORTHO05D012354 2.4e-06 54.7 41 65.9
Sed0013922 Sechium edule HOM05D000099 ORTHO05D002060 3.2e-06 54.3 42 64.3
Dinv01604 Davidia involucrata HOM05D000099 ORTHO05D002060 4.2e-06 53.9 36 72.2
Lj6g0018143 Lotus japonicus HOM05D000099 ORTHO05D000205 9.3e-06 52.8 36 72.2


User provided reference genes

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