Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.2e-63 246.5 142 100.0
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.1e-15 86.3 69 76.8
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 3.6e-15 85.5 63 65.1
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 3.6e-15 85.5 104 62.5
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 2.3e-14 82.8 76 76.3
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 2.3e-14 82.8 63 63.5
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.0e-14 82.4 63 63.5
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 4.0e-14 82.0 63 63.5
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 4.0e-14 82.0 63 63.5
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 4.0e-14 82.0 62 62.9
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 5.2e-14 81.6 107 47.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 5.2e-14 81.6 98 49.0
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 61.9
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 61.9
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 61.9
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 63.5
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 63.5
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 5.2e-14 81.6 63 63.5
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 5.2e-14 81.6 74 58.1
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 5.2e-14 81.6 64 76.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 5.2e-14 81.6 61 63.9
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 6.8e-14 81.3 104 60.6
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 6.8e-14 81.3 95 50.5
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 6.8e-14 81.3 63 60.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 8.9e-14 80.9 89 50.6
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 8.9e-14 80.9 99 50.5
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 8.9e-14 80.9 85 50.6
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.2e-13 80.5 63 60.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 1.2e-13 80.5 63 61.9
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 1.2e-13 80.5 63 61.9
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.2e-13 80.5 62 62.9
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.2e-13 80.5 87 54.0
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.2e-13 80.5 90 54.4
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.5e-13 80.1 63 61.9
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.5e-13 80.1 75 73.3
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.5e-13 80.1 75 73.3
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.5e-13 80.1 63 61.9
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.5e-13 80.1 97 63.9
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.5e-13 80.1 84 70.2
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.5e-13 80.1 89 52.8
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 2.0e-13 79.7 79 54.4
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 2.0e-13 79.7 79 54.4
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.0e-13 79.7 61 62.3
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.6e-13 79.3 63 60.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.6e-13 79.3 63 60.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.6e-13 79.3 63 60.3
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.6e-13 79.3 63 60.3
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 3.4e-13 79.0 63 60.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 3.4e-13 79.0 85 60.0
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 3.4e-13 79.0 63 60.3
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 3.4e-13 79.0 120 54.2
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.4e-13 79.0 63 61.9
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.4e-13 79.0 94 51.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.4e-13 79.0 77 75.3
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 4.4e-13 78.6 86 55.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 4.4e-13 78.6 61 60.7
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 4.4e-13 78.6 94 51.1
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 7.5e-13 77.8 109 45.9
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 7.5e-13 77.8 73 72.6
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 9.8e-13 77.4 107 43.9
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 9.8e-13 77.4 97 57.7
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.2e-12 76.3 119 53.8
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.2e-12 76.3 86 66.3
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.8e-12 75.9 98 55.1
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.8e-12 75.9 87 55.2
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 2.8e-12 75.9 97 47.4
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.8e-12 75.9 93 65.6
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 8.3e-12 74.3 64 57.8
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 9.2e-11 70.9 90 46.7
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 6.6e-09 64.7 72 50.0
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 9.5e-08 60.8 34 76.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.6e-07 60.1 34 76.5
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.1e-07 59.7 34 73.5
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 4.7e-07 58.5 51 56.9
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 6.1e-07 58.2 61 49.2
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 8.0e-07 57.8 78 43.6
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.0e-06 57.4 46 60.9
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 3.0e-06 55.8 50 58.0
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 8.9e-06 54.3 45 57.8


User provided reference genes

Program Settings