Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-131 473.0 241 100.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-131 473.0 241 100.0
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.8e-51 206.8 160 60.0
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 3.7e-44 182.6 152 56.6
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 8.2e-44 181.4 169 50.9
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 3.1e-43 179.5 152 55.9
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.1e-43 179.5 182 50.0
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 5.3e-43 178.7 158 53.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 6.9e-43 178.3 210 46.2
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.2e-42 177.6 160 51.9
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.2e-42 177.6 160 51.9
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 1.5e-42 177.2 147 57.8
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.5e-42 177.2 152 55.3
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 2.6e-42 176.4 181 50.8
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 3.4e-42 176.0 202 48.5
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 3.4e-42 176.0 205 46.3
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 5.9e-42 175.3 207 47.8
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.9e-42 175.3 142 57.7
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 5.9e-42 175.3 149 55.0
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.9e-42 175.3 162 51.2
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 7.6e-42 174.9 142 57.0
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 7.6e-42 174.9 151 54.3
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.0e-41 174.5 152 54.6
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.0e-41 174.5 147 53.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.0e-41 174.5 151 54.3
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 1.0e-41 174.5 152 53.9
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.3e-41 174.1 152 53.3
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.3e-41 174.1 162 51.2
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.3e-41 174.1 146 55.5
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 1.3e-41 174.1 148 55.4
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 1.7e-41 173.7 200 48.0
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 1.7e-41 173.7 201 48.3
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.7e-41 173.7 182 49.5
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.7e-41 173.7 209 46.9
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 1.7e-41 173.7 162 50.6
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.7e-41 173.7 211 47.4
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 2.2e-41 173.3 147 55.8
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 2.9e-41 172.9 159 51.6
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.8e-41 172.6 146 55.5
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 5.0e-41 172.2 147 56.5
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 6.5e-41 171.8 148 54.7
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 6.5e-41 171.8 154 55.8
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 6.5e-41 171.8 149 55.7
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 6.5e-41 171.8 154 53.9
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 8.5e-41 171.4 146 54.8
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.1e-40 171.0 148 54.1
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.4e-40 170.6 157 51.0
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.9e-40 170.2 154 53.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.9e-40 170.2 148 54.1
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 2.5e-40 169.9 157 51.6
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 3.2e-40 169.5 158 50.0
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.2e-40 169.5 148 54.1
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 4.2e-40 169.1 150 52.0
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 4.2e-40 169.1 151 53.0
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 5.5e-40 168.7 147 52.4
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 9.3e-40 167.9 151 51.7
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.2e-39 167.5 148 50.7
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.6e-39 167.2 204 44.6
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.6e-39 167.2 142 54.2
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.1e-39 166.8 148 51.4
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 2.1e-39 166.8 156 48.7
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.6e-39 166.0 147 53.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 4.6e-39 165.6 150 52.0
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 4.6e-39 165.6 151 55.0
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.3e-38 164.1 151 50.3
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.8e-38 163.7 150 48.7
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.8e-38 163.7 152 53.3
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.3e-38 163.3 156 51.3
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 2.3e-38 163.3 148 50.0
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 3.9e-38 162.5 149 51.0
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 6.7e-38 161.8 148 49.3
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.5e-37 160.6 174 45.4
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.5e-37 159.8 150 53.3
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 2.5e-37 159.8 234 40.2
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 3.3e-37 159.5 147 49.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 3.3e-37 159.5 152 52.0
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.7e-37 157.9 153 51.6
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.7e-37 157.9 153 51.6
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-36 157.5 153 51.6
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.6e-36 157.1 153 51.6
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 1.6e-36 157.1 148 49.3
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.7e-36 156.0 156 50.0
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 4.1e-35 152.5 157 45.9
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 6.9e-35 151.8 148 48.6
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 7.7e-34 148.3 154 48.7
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.0e-33 147.9 126 53.2
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 3.8e-33 146.0 151 51.0
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 3.6e-31 139.4 131 51.1
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 4.6e-31 139.0 202 40.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 5.1e-30 135.6 157 44.6
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 6.7e-30 135.2 183 43.7
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 5.7e-29 132.1 116 50.9
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 5.7e-29 132.1 142 46.5
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.5e-26 124.0 115 47.0
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.5e-26 124.0 114 49.1
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.9e-24 117.1 127 48.0
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.8e-22 110.5 181 35.4
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 3.7e-20 102.8 84 58.3
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 9.4e-16 88.2 213 31.5
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.6e-15 87.4 153 35.3
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.7e-15 86.7 115 39.1
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 8.0e-15 85.1 62 67.7
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 5.7e-13 79.0 86 46.5
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 2.2e-09 67.0 157 28.7
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.1e-07 58.9 205 28.8


User provided reference genes

Program Settings