Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.0e-91 339.3 206 100.0
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.0e-91 339.3 206 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.6e-24 117.1 194 51.5
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 2.2e-21 106.7 164 53.0
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 8.3e-13 78.2 160 41.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 9.2e-12 74.7 160 40.6
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 9.2e-12 74.7 165 39.4
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.7e-11 73.2 163 38.0
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 2.7e-11 73.2 173 39.3
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 3.5e-11 72.8 161 41.0
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.5e-11 72.8 163 34.4
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 3.5e-11 72.8 164 40.9
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 4.6e-11 72.4 155 36.1
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 4.6e-11 72.4 164 37.8
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 7.8e-11 71.6 160 41.2
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 7.8e-11 71.6 159 38.4
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.3e-10 70.9 161 41.0
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 2.3e-10 70.1 166 36.7
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 2.3e-10 70.1 164 37.8
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 2.3e-10 70.1 163 42.3
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 3.9e-10 69.3 161 41.6
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 5.0e-10 68.9 159 35.8
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 6.6e-10 68.6 164 37.2
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 8.6e-10 68.2 174 38.5
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.1e-09 67.8 163 44.8
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.1e-09 67.8 159 40.9
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 1.1e-09 67.8 159 40.9
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.5e-09 67.4 159 41.5
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.5e-09 67.4 167 39.5
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.9e-09 67.0 163 41.1
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.9e-09 67.0 129 44.2
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.9e-09 67.0 114 38.6
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.9e-09 67.0 163 38.7
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 1.9e-09 67.0 180 39.4
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 1.9e-09 67.0 167 38.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 2.5e-09 66.6 158 36.7
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.5e-09 66.6 164 35.4
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 3.3e-09 66.2 174 37.4
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 4.3e-09 65.9 162 37.7
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.3e-09 65.9 159 40.3
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 5.6e-09 65.5 165 40.6
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 5.6e-09 65.5 163 37.4
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 5.6e-09 65.5 163 38.7
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 7.3e-09 65.1 161 36.6
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 7.3e-09 65.1 163 38.0
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 9.5e-09 64.7 178 34.3
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 1.2e-08 64.3 128 46.9
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.2e-08 64.3 176 35.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.2e-08 64.3 161 32.9
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.6e-08 63.9 161 41.6
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.6e-08 63.9 190 37.9
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.6e-08 63.9 190 37.9
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.1e-08 63.5 157 37.6
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.8e-08 63.2 163 38.0
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 2.8e-08 63.2 161 39.1
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 4.7e-08 62.4 163 35.6
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.7e-08 62.4 160 33.8
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 4.7e-08 62.4 165 39.4
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 4.7e-08 62.4 164 37.2
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 4.7e-08 62.4 161 38.5
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 6.2e-08 62.0 162 41.4
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 6.2e-08 62.0 164 37.8
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 8.1e-08 61.6 116 39.7
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.1e-07 61.2 162 35.8
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.1e-07 61.2 127 44.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.4e-07 60.8 166 31.3
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 1.4e-07 60.8 127 44.1
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 1.4e-07 60.8 164 34.8
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 1.8e-07 60.5 163 37.4
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 1.8e-07 60.5 164 35.4
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.3e-07 60.1 171 31.6
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 3.1e-07 59.7 163 35.6
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 3.1e-07 59.7 161 41.6
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 3.1e-07 59.7 161 41.6
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 3.1e-07 59.7 161 41.6
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 3.1e-07 59.7 113 31.9
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.1e-07 59.7 176 39.8
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 3.1e-07 59.7 220 31.4
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 3.1e-07 59.7 163 34.4
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 4.0e-07 59.3 164 34.8
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 5.2e-07 58.9 162 34.0
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 5.2e-07 58.9 164 33.5
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 8.9e-07 58.2 205 35.6
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.2e-06 57.8 163 32.5
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.2e-06 57.8 163 35.6
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.0e-06 57.0 165 37.0
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.6e-06 56.6 164 38.4
CBR_g49335 Chara braunii HOM05D007192 ORTHO05D132664 2.6e-06 56.6 173 46.2
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 7.5e-06 55.1 162 33.3
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 7.5e-06 55.1 123 43.9


User provided reference genes

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