Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 6.7e-212 740.3 356 100.0
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 1.6e-59 234.2 278 42.8
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.6e-54 216.9 252 44.4
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 2.9e-53 213.4 277 41.2
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.6e-51 207.6 279 41.9
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 6.0e-51 205.7 303 37.6
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 6.0e-51 205.7 279 42.3
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.1e-49 201.4 277 40.4
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.5e-49 201.1 277 40.1
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 1.9e-49 200.7 278 39.9
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.3e-49 199.5 277 39.7
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 5.6e-49 199.1 278 36.7
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 5.6e-49 199.1 279 39.1
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 9.5e-49 198.4 277 39.0
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.6e-48 197.6 278 38.8
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.6e-48 197.6 277 38.3
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.1e-48 197.2 273 37.7
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.6e-48 196.4 277 39.0
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.7e-48 196.1 280 38.9
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 6.2e-48 195.7 274 38.0
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.2e-48 195.7 273 37.7
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 8.1e-48 195.3 319 33.5
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 8.1e-48 195.3 276 40.2
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-47 194.5 277 38.6
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 3.1e-47 193.4 279 37.6
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 3.1e-47 193.4 280 36.8
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 4.0e-47 193.0 261 40.6
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 4.0e-47 193.0 275 37.5
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 4.0e-47 193.0 281 37.4
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 4.0e-47 193.0 280 38.6
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 5.2e-47 192.6 276 38.0
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 6.8e-47 192.2 282 38.7
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 8.9e-47 191.8 327 32.7
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.2e-46 191.4 277 37.5
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.5e-46 191.0 266 39.8
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 2.0e-46 190.7 278 38.8
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 2.0e-46 190.7 274 36.5
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 4.4e-46 189.5 277 37.2
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 4.4e-46 189.5 275 39.3
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 4.4e-46 189.5 272 37.9
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 4.4e-46 189.5 272 37.9
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 9.9e-46 188.3 273 37.7
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 9.9e-46 188.3 279 38.4
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.7e-45 187.6 274 36.5
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.7e-45 187.6 293 37.9
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.2e-45 187.2 276 38.0
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 2.9e-45 186.8 284 37.7
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.9e-45 186.8 276 36.6
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 3.7e-45 186.4 280 36.1
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 3.7e-45 186.4 274 36.9
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.9e-45 186.0 292 37.3
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 4.9e-45 186.0 276 37.3
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 8.4e-45 185.3 274 38.3
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 8.4e-45 185.3 276 37.7
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.1e-44 184.9 276 38.4
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.1e-44 184.9 278 37.4
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.1e-44 184.9 293 36.9
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.4e-44 184.5 276 37.0
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.9e-44 184.1 277 36.5
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.9e-44 184.1 278 37.1
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 3.2e-44 183.3 290 35.9
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 3.2e-44 183.3 281 38.4
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 3.2e-44 183.3 278 37.1
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 5.4e-44 182.6 272 37.5
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.1e-44 182.2 289 36.0
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 9.2e-44 181.8 288 34.7
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 9.2e-44 181.8 290 36.9
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.2e-43 181.4 290 36.2
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.6e-43 181.0 280 35.7
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 1.6e-43 181.0 282 37.2
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.6e-43 181.0 275 36.4
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.1e-43 180.6 273 35.5
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.7e-43 180.3 274 37.2
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 7.8e-43 178.7 298 35.6
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 7.8e-43 178.7 278 35.6
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.0e-42 176.8 279 35.8
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 3.9e-42 176.4 281 36.3
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 5.1e-42 176.0 274 38.3
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 6.6e-42 175.6 281 36.7
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 2.8e-40 170.2 278 35.6
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.1e-39 168.3 277 35.7
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.4e-39 167.2 289 35.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 8.9e-39 165.2 249 35.7
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.2e-38 164.9 259 36.7
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 2.0e-38 164.1 253 34.0
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 7.6e-38 162.2 279 34.4
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 2.9e-37 160.2 266 35.7
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.4e-36 157.1 267 34.5
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 3.2e-36 156.8 250 36.8
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 4.2e-36 156.4 276 35.9
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.2e-36 156.4 296 31.4
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.6e-35 154.5 218 39.4
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.7e-35 153.7 210 38.6
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 3.5e-35 153.3 288 33.7
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 8.7e-34 148.7 243 36.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 1.5e-33 147.9 251 34.3
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 5.6e-33 146.0 216 38.9
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 8.1e-32 142.1 289 30.8
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 6.9e-31 139.0 295 31.5
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 1.5e-30 137.9 192 42.2
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.6e-30 137.1 286 31.8
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 1.1e-28 131.7 292 31.8
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.2e-27 128.3 206 35.4
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 1.6e-27 127.9 192 38.0
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 7.9e-27 125.6 150 39.3
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 5.1e-26 122.9 195 36.9
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 8.7e-26 122.1 271 30.3
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 1.1e-25 121.7 290 27.6
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.1e-25 121.7 194 36.1
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 7.4e-25 119.0 251 30.7
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.3e-24 118.2 251 30.7
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.4e-23 114.8 287 28.9
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 5.3e-23 112.8 200 33.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 2.2e-21 107.5 191 33.5
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.6e-19 101.3 242 29.8
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 7.9e-19 99.0 190 30.5
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.0e-18 98.6 157 35.7
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.5e-17 94.7 120 39.2
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.9e-17 94.4 159 35.8
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 7.4e-17 92.4 120 38.3
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.4e-15 87.4 119 37.8
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.5e-14 84.7 123 35.0
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.3e-13 81.6 139 37.4
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 8.4e-13 79.0 130 37.7
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 3.2e-12 77.0 125 37.6
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 3.2e-12 77.0 121 36.4
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.2e-11 75.1 155 31.0
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 7.4e-09 65.9 86 40.7
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 3.1e-07 60.5 58 51.7
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 4.5e-06 56.6 125 30.4


User provided reference genes

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