Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.5e-86 322.8 161 100.0
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.2e-38 163.7 166 56.0
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.4e-33 144.4 158 50.0
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.0e-17 93.2 137 40.9
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.4e-17 91.3 146 37.0
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.8e-16 89.4 162 37.7
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.1e-15 84.3 157 36.9
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.0e-13 80.9 139 33.8
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.2e-13 79.7 150 32.7
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-12 77.4 138 35.5
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 4.2e-12 75.5 132 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 5.5e-12 75.1 122 42.6
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 5.5e-12 75.1 144 31.9
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 7.2e-12 74.7 139 37.4
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 7.2e-12 74.7 137 36.5
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 4.7e-11 72.0 143 37.1
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.7e-11 72.0 137 31.4
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 6.1e-11 71.6 139 36.0
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 8.0e-11 71.2 140 32.1
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 8.0e-11 71.2 135 31.9
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 8.0e-11 71.2 140 35.7
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 1.0e-10 70.9 150 32.7
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 1.0e-10 70.9 150 32.0
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 1.0e-10 70.9 143 35.7
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.8e-10 70.1 137 30.7
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 2.3e-10 69.7 140 35.0
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 3.0e-10 69.3 149 34.2
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 3.0e-10 69.3 138 33.3
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 3.9e-10 68.9 157 33.1
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 3.9e-10 68.9 136 34.6
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 5.2e-10 68.6 145 35.2
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 6.7e-10 68.2 152 32.9
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 6.7e-10 68.2 146 30.8
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 8.8e-10 67.8 138 35.5
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.1e-09 67.4 134 33.6
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 1.1e-09 67.4 132 34.8
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 1.1e-09 67.4 145 31.0
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.5e-09 67.0 138 34.1
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.5e-09 67.0 134 33.6
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.5e-09 67.0 135 32.6
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.5e-09 67.0 135 32.6
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 2.0e-09 66.6 143 34.3
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 2.0e-09 66.6 148 35.1
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.0e-09 66.6 144 30.6
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 2.0e-09 66.6 137 33.6
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 2.0e-09 66.6 133 33.1
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 2.6e-09 66.2 149 32.9
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 3.3e-09 65.9 148 34.5
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 4.4e-09 65.5 143 30.8
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 5.7e-09 65.1 147 32.0
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 5.7e-09 65.1 147 32.0
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 7.4e-09 64.7 154 33.8
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 7.4e-09 64.7 140 31.4
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 7.4e-09 64.7 138 33.3
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 9.7e-09 64.3 147 32.7
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.3e-08 63.9 149 34.9
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.3e-08 63.9 133 33.1
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.3e-08 63.9 144 32.6
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 1.7e-08 63.5 151 33.1
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.7e-08 63.5 128 35.2
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 1.7e-08 63.5 145 32.4
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 2.2e-08 63.2 137 33.6
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.2e-08 63.2 144 34.7
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 2.2e-08 63.2 140 34.3
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 2.8e-08 62.8 141 33.3
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 3.7e-08 62.4 149 32.9
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 6.3e-08 61.6 128 30.5
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 6.3e-08 61.6 136 31.6
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 8.2e-08 61.2 141 34.8
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 8.2e-08 61.2 137 32.8
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 8.2e-08 61.2 143 34.3
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 8.2e-08 61.2 145 33.8
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 1.1e-07 60.8 144 32.6
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 1.1e-07 60.8 128 30.5
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 1.1e-07 60.8 128 30.5
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.1e-07 60.8 127 33.9
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.4e-07 60.5 140 32.9
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 1.4e-07 60.5 138 31.2
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.4e-07 60.5 142 35.9
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 2.4e-07 59.7 126 31.0
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 2.4e-07 59.7 137 31.4
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 3.1e-07 59.3 128 29.7
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 3.1e-07 59.3 128 29.7
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.1e-07 59.3 116 36.2
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.1e-07 59.3 140 29.3
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.1e-07 59.3 140 29.3
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 4.1e-07 58.9 142 33.1
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 4.1e-07 58.9 134 31.3
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 4.1e-07 58.9 134 32.8
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 5.3e-07 58.5 149 28.9
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 5.3e-07 58.5 128 32.0
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 5.3e-07 58.5 139 30.9
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 5.3e-07 58.5 147 32.7
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 7.0e-07 58.2 134 32.8
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 9.1e-07 57.8 126 30.2
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 9.1e-07 57.8 142 33.8
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 1.2e-06 57.4 128 28.9
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.2e-06 57.4 140 31.4
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.2e-06 57.4 157 31.8
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.6e-06 57.0 148 31.1
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.6e-06 57.0 136 33.1
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 2.0e-06 56.6 139 28.8
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 2.0e-06 56.6 136 30.9
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 2.0e-06 56.6 121 35.5
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 2.6e-06 56.2 148 30.4
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 2.6e-06 56.2 126 28.6
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 2.6e-06 56.2 139 29.5
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 3.5e-06 55.8 133 32.3
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 3.5e-06 55.8 137 32.1
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 4.5e-06 55.5 148 30.4
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 4.5e-06 55.5 131 31.3
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 5.9e-06 55.1 138 32.6
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 7.7e-06 54.7 144 29.9
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 7.7e-06 54.7 138 32.6
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 7.7e-06 54.7 138 32.6


User provided reference genes

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