Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0211s0003 Marchantia polymorpha HOM05D000782 ORTHO05D000571 2.1e-67 258.8 126 100.0
Mapoly0031s0012 Marchantia polymorpha HOM05D000782 ORTHO05D000571 7.5e-57 223.8 131 84.7
Mapoly0031s0017 Marchantia polymorpha HOM05D000782 ORTHO05D000571 7.5e-57 223.8 131 84.7
Mapoly0031s0022 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.1e-55 219.9 131 83.2
Mapoly0211s0009 Marchantia polymorpha HOM05D000782 ORTHO05D000571 4.1e-55 218.0 131 82.4
Mapoly0211s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 7.0e-55 217.2 131 83.2
Mapoly0031s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 6.4e-48 194.1 116 85.3
Mapoly0001s0475 Marchantia polymorpha HOM05D000782 ORTHO05D000571 6.4e-40 167.5 131 64.1
Mapoly0211s0011 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.5e-36 156.4 130 59.2
Mapoly0031s0018 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.9e-36 156.0 130 59.2
Mapoly0031s0002 Marchantia polymorpha HOM05D000782 ORTHO05D000571 2.1e-35 152.5 130 57.7
Mapoly0184s0026 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.9e-28 129.4 131 48.1
Mapoly0211s0007 Marchantia polymorpha HOM05D000782 ORTHO05D000571 2.5e-28 129.0 124 53.2
Mapoly0075s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 4.6e-22 108.2 66 78.8
Mapoly0031s0006 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.5e-20 103.2 59 86.4
Mapoly0016s0117 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.0e-13 79.0 59 61.0
Thhalv10014621m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.2e-09 67.0 131 29.0
BcaB01g06251 Brassica carinata HOM05D000782 ORTHO05D000571 1.5e-09 66.6 136 32.4
Carub.0003s1108 Capsella rubella HOM05D000782 ORTHO05D000571 1.5e-09 66.6 131 29.0
Cfa017082 Carpinus fangiana HOM05D000782 ORTHO05D000571 2.0e-09 66.2 131 29.8
AL6G10280 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.6e-09 65.9 131 28.2
BraA03t09400Z Brassica rapa HOM05D000782 ORTHO05D000571 3.4e-09 65.5 138 31.2
BcaB04g21120 Brassica carinata HOM05D000782 ORTHO05D000571 5.8e-09 64.7 131 29.0
BcaC03g13089 Brassica carinata HOM05D000782 ORTHO05D000571 5.8e-09 64.7 135 30.4
C02p00070 Brassica napus HOM05D000782 ORTHO05D000571 5.8e-09 64.7 135 30.4
BraA02t04679Z Brassica rapa HOM05D000782 ORTHO05D000571 5.8e-09 64.7 135 30.4
Carub.0006s0008 Capsella rubella HOM05D000782 ORTHO05D000571 5.8e-09 64.7 131 26.7
Thhalv10022341m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 5.8e-09 64.7 131 27.5
Lj2A64T52 Lonicera japonica HOM05D000782 ORTHO05D000571 5.8e-09 64.7 136 30.1
Sp6g41010 Schrenkiella parvula HOM05D000782 ORTHO05D000571 5.8e-09 64.7 136 31.6
Cfa017085 Carpinus fangiana HOM05D000782 ORTHO05D000571 9.9e-09 63.9 130 28.5
AT5G01750 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 1.3e-08 63.5 131 26.0
BraA01t04163Z Brassica rapa HOM05D000782 ORTHO05D000571 1.7e-08 63.2 131 28.2
CARHR086290 Cardamine hirsuta HOM05D000782 ORTHO05D000571 1.7e-08 63.2 86 32.6
FAN09G0140 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.7e-08 63.2 130 30.0
Prupe.6G287500 Prunus persica HOM05D000782 ORTHO05D000571 1.7e-08 63.2 130 26.2
RcHm_v2.0_Chr3g0461171 Rosa chinensis HOM05D000782 ORTHO05D000571 1.7e-08 63.2 130 29.2
THA.LOC104823312 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 1.7e-08 63.2 137 32.8
CiPaw.10G162500 Carya illinoinensis HOM05D000782 ORTHO05D000571 2.2e-08 62.8 130 33.8
FvH4_6g10350 Fragaria vesca HOM05D000782 ORTHO05D000571 2.2e-08 62.8 130 30.0
FAN14G2230 Fragaria x ananassa HOM05D000782 ORTHO05D000571 2.2e-08 62.8 130 30.0
AL3G23300 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.9e-08 62.4 131 27.5
BcaC09g48200 Brassica carinata HOM05D000782 ORTHO05D000571 2.9e-08 62.4 131 28.2
C03p45130 Brassica napus HOM05D000782 ORTHO05D000571 2.9e-08 62.4 131 29.0
AT3G11740 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 4.9e-08 61.6 131 28.2
Cfa017081 Carpinus fangiana HOM05D000744 ORTHO05D000332 4.9e-08 61.6 131 29.0
FAN05G5695 Fragaria x ananassa HOM05D000782 ORTHO05D000571 4.9e-08 61.6 130 30.0
Aa31LG1G23400 Aethionema arabicum HOM05D000782 ORTHO05D000571 6.4e-08 61.2 132 31.1
BcaB04g18659 Brassica carinata HOM05D000782 ORTHO05D000571 6.4e-08 61.2 131 27.5
DCAR_028905 Daucus carota HOM05D000782 ORTHO05D000571 6.4e-08 61.2 135 29.6
Sp3g09970 Schrenkiella parvula HOM05D000782 ORTHO05D000571 6.4e-08 61.2 131 27.5
BolC1t05294H Brassica oleracea HOM05D000782 ORTHO05D000571 8.4e-08 60.8 131 27.5
BolC3t16777H Brassica oleracea HOM05D000782 ORTHO05D000571 8.4e-08 60.8 131 28.2
A03p37270 Brassica napus HOM05D000782 ORTHO05D000571 1.4e-07 60.1 131 28.2
BraA03t12887Z Brassica rapa HOM05D000782 ORTHO05D000571 1.4e-07 60.1 131 28.2
CARHR113120 Cardamine hirsuta HOM05D000782 ORTHO05D000571 1.4e-07 60.1 132 31.1
Thhalv10026215m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.4e-07 60.1 127 29.9
HanXRQChr15g0463441 Helianthus annuus HOM05D000002 ORTHO05D000571 1.4e-07 60.1 130 26.9
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 1.9e-07 59.7 133 27.8
Thhalv10025938m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.9e-07 59.7 125 32.0
FAN05G0058 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.9e-07 59.7 130 29.2
MD12G1182900 Malus domestica HOM05D000782 ORTHO05D000571 1.9e-07 59.7 130 25.4
AL1G48330 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.4e-07 59.3 99 36.4
Duzib268G1165 Durio zibethinus HOM05D000782 ORTHO05D000571 3.2e-07 58.9 130 25.4
Lalb_Chr03g0043661 Lupinus albus HOM05D000782 ORTHO05D000571 3.2e-07 58.9 132 26.5
DCAR_015455 Daucus carota HOM05D000782 ORTHO05D000571 5.5e-07 58.2 135 28.1
vmacro20342 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 5.5e-07 58.2 135 23.7
CDE06G0912 Ceratophyllum demersum HOM05D000782 ORTHO05D000571 7.1e-07 57.8 134 25.4
PSO017G2627 Papaver somniferum HOM05D000782 ORTHO05D000571 7.1e-07 57.8 131 26.0
AT2G14560 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 9.3e-07 57.4 126 32.5
CANSAT35G0618 Cannabis sativa HOM05D000782 ORTHO05D000571 9.3e-07 57.4 132 25.0
CiPaw.10G162200 Carya illinoinensis HOM05D000782 ORTHO05D000571 9.3e-07 57.4 130 31.5
Lj1g0027513 Lotus japonicus HOM05D000782 ORTHO05D000571 9.3e-07 57.4 127 27.6
Medtr7g072170 Medicago truncatula HOM05D000782 ORTHO05D000571 1.2e-06 57.0 130 24.6
Aa31LG1G23410 Aethionema arabicum HOM05D000782 ORTHO05D000571 1.6e-06 56.6 124 31.5
PSO170G5746 Papaver somniferum HOM05D000782 ORTHO05D000571 1.6e-06 56.6 131 25.2
AT1G33840 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 2.1e-06 56.2 99 36.4
Ca_08083_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000571 2.1e-06 56.2 134 24.6
Duzib268G0853 Durio zibethinus HOM05D000782 ORTHO05D000571 2.1e-06 56.2 130 23.8
Psat1g155400 Pisum sativum HOM05D000782 ORTHO05D000571 2.1e-06 56.2 130 24.6
Aqoxy4G02163 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 2.7e-06 55.8 135 27.4
Lsat_1_v5_gn_9_38141 Lactuca sativa HOM05D000782 ORTHO05D000571 2.7e-06 55.8 130 23.8
Os07g0230700 Oryza sativa ssp. japonica HOM05D000782 ORTHO05D000571 2.7e-06 55.8 132 28.8
Haze_06378 Corylus avellana HOM05D000782 ORTHO05D000571 3.5e-06 55.5 126 27.0
Peaxi162Scf00009g00813 Petunia axillaris HOM05D000782 ORTHO05D000571 3.5e-06 55.5 135 25.9
Phvul.008G089000 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 3.5e-06 55.5 132 24.2
Carub.0002s2182 Capsella rubella HOM05D000782 ORTHO05D000571 4.6e-06 55.1 131 30.5
Psat3g121480 Pisum sativum HOM05D000782 ORTHO05D000571 4.6e-06 55.1 130 24.6
Thecc.09G364400 Theobroma cacao HOM05D000782 ORTHO05D000571 4.6e-06 55.1 130 26.2
DCAR_028900 Daucus carota HOM05D000782 ORTHO05D000571 6.0e-06 54.7 136 26.5
Glyma.18G209800 Glycine max HOM05D000782 ORTHO05D000571 6.0e-06 54.7 132 23.5
Lj3A943G21 Lonicera japonica HOM05D000782 ORTHO05D000571 6.0e-06 54.7 136 26.5
Rhsim05G0227600 Rhododendron simsii HOM05D000782 ORTHO05D000571 6.0e-06 54.7 132 25.0
TAR623G1064 Trochodendron aralioides HOM05D000782 ORTHO05D000571 6.0e-06 54.7 132 23.5
Aqoxy4G00262 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 7.9e-06 54.3 127 25.2
Ciclev10012901m.g Citrus clementina HOM05D000782 ORTHO05D000571 7.9e-06 54.3 129 24.0
Medtr7g072120 Medicago truncatula HOM05D000782 ORTHO05D000571 7.9e-06 54.3 130 23.8
TPR.G35292 Trifolium pratense HOM05D000782 ORTHO05D000571 7.9e-06 54.3 130 26.2
vmacro20341 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 7.9e-06 54.3 130 26.2
VMungo0925G0001 Vigna mungo HOM05D000782 ORTHO05D000571 7.9e-06 54.3 132 24.2


User provided reference genes

Program Settings