Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 2.0e-188 662.9 524 100.0
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.9e-45 188.0 551 40.3
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.5e-42 178.3 446 41.9
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 4.7e-36 156.8 236 43.6
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.3e-25 122.1 188 44.7
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 1.4e-24 118.6 197 40.1
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 7.0e-24 116.3 192 41.7
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 9.2e-24 115.9 186 39.8
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.2e-23 115.5 196 39.3
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 5.9e-23 113.2 241 37.8
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 7.8e-23 112.8 185 41.1
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.0e-22 112.5 527 33.8
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.3e-22 112.1 185 40.0
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 2.3e-22 111.3 212 39.2
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 2.3e-22 111.3 195 37.4
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.9e-22 110.9 210 35.2
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 2.9e-22 110.9 199 39.7
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 2.9e-22 110.9 195 37.9
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 3.8e-22 110.5 188 39.4
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 3.8e-22 110.5 192 38.5
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 5.0e-22 110.2 192 38.5
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 5.0e-22 110.2 192 38.0
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 5.0e-22 110.2 185 39.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 6.6e-22 109.8 193 38.9
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 8.6e-22 109.4 230 38.3
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 1.1e-21 109.0 184 37.5
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.5e-21 108.6 184 38.6
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.9e-21 108.2 195 39.5
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 1.9e-21 108.2 192 39.6
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 1.9e-21 108.2 192 39.6
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.9e-21 108.2 193 38.9
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.9e-21 108.2 193 38.9
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 2.5e-21 107.8 134 48.5
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 4.3e-21 107.1 210 35.7
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 4.3e-21 107.1 185 37.8
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 4.3e-21 107.1 191 39.3
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 5.6e-21 106.7 197 37.6
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 7.3e-21 106.3 216 38.4
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 7.3e-21 106.3 221 38.0
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 9.5e-21 105.9 190 37.4
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 9.5e-21 105.9 524 33.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.2e-20 105.5 519 32.0
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.6e-20 105.1 191 38.7
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 2.8e-20 104.4 192 37.5
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 3.6e-20 104.0 198 38.4
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 3.6e-20 104.0 203 35.5
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 3.6e-20 104.0 208 38.0
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 3.6e-20 104.0 192 39.1
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 8.0e-20 102.8 194 36.6
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.8e-19 101.7 527 34.3
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 2.3e-19 101.3 217 34.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 3.0e-19 100.9 229 36.2
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 3.0e-19 100.9 190 36.3
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 3.0e-19 100.9 190 36.3
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 4.0e-19 100.5 523 32.9
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.0e-19 100.5 213 36.2
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.0e-19 100.5 213 36.2
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 5.2e-19 100.1 218 35.8
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 6.8e-19 99.8 235 34.9
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 6.8e-19 99.8 164 37.8
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.5e-18 98.6 209 33.0
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.5e-18 98.6 194 37.1
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 2.0e-18 98.2 212 36.3
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 2.0e-18 98.2 217 36.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 2.6e-18 97.8 201 37.3
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 2.6e-18 97.8 252 32.1
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 4.4e-18 97.1 219 34.7
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 5.8e-18 96.7 190 36.8
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 7.5e-18 96.3 115 46.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 7.5e-18 96.3 141 39.7
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 7.5e-18 96.3 132 40.9
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 9.8e-18 95.9 231 33.8
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 9.8e-18 95.9 520 29.4
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.3e-17 95.5 205 36.1
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.3e-17 95.5 201 34.8
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.3e-17 95.5 164 37.2
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.3e-17 95.5 201 34.8
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 1.7e-17 95.1 217 35.5
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.2e-17 94.7 212 34.9
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 3.7e-17 94.0 171 40.4
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 3.7e-17 94.0 522 32.8
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 3.7e-17 94.0 184 36.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 6.4e-17 93.2 211 34.1
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 6.4e-17 93.2 212 34.0
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 8.3e-17 92.8 519 24.7
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-16 92.4 195 37.4
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 1.4e-16 92.0 518 29.7
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.4e-16 92.0 201 34.3
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 3.2e-16 90.9 196 36.2
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 3.2e-16 90.9 213 32.4
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 4.1e-16 90.5 178 37.1
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-15 89.0 216 33.8
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.2e-15 89.0 204 32.8
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.7e-15 87.8 192 36.5
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 6.0e-15 86.7 217 33.2
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 6.0e-15 86.7 192 35.9
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 3.9e-14 84.0 228 32.5
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 8.6e-14 82.8 84 58.3
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 9.5e-13 79.3 199 30.2
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 1.6e-12 78.6 85 49.4
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.6e-12 77.4 87 50.6
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.0e-10 71.6 388 38.4
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 7.5e-10 69.7 73 53.4
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.1e-08 65.9 154 35.1
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.4e-08 65.5 79 50.6
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 2.4e-08 64.7 85 44.7
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 3.2e-08 64.3 76 52.6
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 4.1e-08 63.9 85 48.2
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.6e-07 62.0 156 32.1
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.3e-06 58.2 236 27.5


User provided reference genes

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