Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 8.3e-188 660.2 332 100.0
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 5.2e-57 225.7 177 63.8
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 3.5e-53 213.0 203 51.2
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 1.1e-49 201.4 174 53.4
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 1.1e-49 201.4 175 54.3
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 1.4e-49 201.1 172 55.8
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 3.1e-49 199.9 173 54.3
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 3.1e-49 199.9 178 55.1
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 3.1e-49 199.9 162 56.8
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 5.2e-49 199.1 174 53.4
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 1.2e-48 198.0 158 58.2
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 1.5e-48 197.6 162 58.0
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 1.5e-48 197.6 162 56.2
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 1.5e-48 197.6 171 53.8
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 3.4e-48 196.4 163 56.4
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 4.4e-48 196.1 168 54.2
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 4.4e-48 196.1 160 58.1
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 5.8e-48 195.7 162 58.0
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 5.8e-48 195.7 184 51.6
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 5.8e-48 195.7 170 53.5
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 1.3e-47 194.5 167 52.7
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 1.3e-47 194.5 179 51.4
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 1.7e-47 194.1 169 55.6
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 1.7e-47 194.1 198 49.0
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 2.2e-47 193.7 162 54.9
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 2.2e-47 193.7 162 54.9
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 3.7e-47 193.0 171 51.5
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 4.9e-47 192.6 158 57.0
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 6.4e-47 192.2 162 55.6
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 6.4e-47 192.2 162 55.6
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 6.4e-47 192.2 158 55.1
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 6.4e-47 192.2 158 56.3
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 8.3e-47 191.8 170 52.4
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 1.4e-46 191.0 182 51.1
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.4e-46 191.0 201 49.8
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 1.4e-46 191.0 177 52.0
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 1.9e-46 190.7 160 55.6
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 1.9e-46 190.7 162 54.9
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 2.4e-46 190.3 162 53.7
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 4.1e-46 189.5 176 53.4
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 4.1e-46 189.5 160 54.4
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 4.1e-46 189.5 163 55.8
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 4.1e-46 189.5 163 55.8
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.1e-46 189.5 163 56.4
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.4e-46 189.1 177 54.2
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 5.4e-46 189.1 160 56.9
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 7.0e-46 188.7 181 51.9
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 7.0e-46 188.7 163 56.4
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 9.2e-46 188.3 161 54.0
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 9.2e-46 188.3 177 54.2
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 9.2e-46 188.3 168 53.6
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 9.2e-46 188.3 163 54.0
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 9.2e-46 188.3 160 55.0
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 1.2e-45 188.0 165 55.2
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 1.2e-45 188.0 163 53.4
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 1.2e-45 188.0 160 54.4
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 1.6e-45 187.6 160 56.9
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 2.1e-45 187.2 160 55.6
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 2.7e-45 186.8 160 55.0
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 2.7e-45 186.8 160 55.0
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 2.7e-45 186.8 184 51.6
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.7e-45 186.8 163 55.8
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 3.5e-45 186.4 187 50.3
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 3.5e-45 186.4 187 50.3
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 4.6e-45 186.0 163 52.8
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 4.6e-45 186.0 160 55.0
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 6.0e-45 185.7 160 53.8
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 6.0e-45 185.7 184 51.1
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 6.0e-45 185.7 181 49.7
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 7.8e-45 185.3 163 54.0
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.0e-44 184.9 187 49.7
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 1.0e-44 184.9 161 54.7
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.3e-44 184.5 163 55.2
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.3e-44 184.5 162 54.3
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 1.3e-44 184.5 172 52.9
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 3.0e-44 183.3 160 52.5
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 5.0e-44 182.6 171 52.0
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 6.6e-44 182.2 162 52.5
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 1.9e-43 180.6 169 52.1
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 3.3e-43 179.9 160 51.9
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 6.2e-42 175.6 163 51.5
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 5.2e-41 172.6 167 49.1
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.5e-40 171.0 167 48.5
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 3.4e-40 169.9 162 49.4
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 4.4e-40 169.5 160 50.0
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 4.4e-40 169.5 167 48.5
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 5.8e-40 169.1 174 48.3
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 9.9e-40 168.3 254 39.4
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 8.3e-39 165.2 162 49.4
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 1.4e-38 164.5 204 42.6
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 5.4e-38 162.5 203 42.4
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 3.5e-37 159.8 246 38.2
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 5.1e-36 156.0 139 52.5
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 7.3e-35 152.1 143 53.1
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 5.8e-32 142.5 179 43.6
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 6.4e-31 139.0 121 54.5
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 2.5e-27 127.1 298 28.9
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 2.1e-26 124.0 162 42.6
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 8.1e-26 122.1 128 45.3
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 1.1e-25 121.7 159 41.5
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.4e-22 111.3 164 39.0
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 4.2e-22 109.8 87 57.5
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 1.0e-20 105.1 163 39.3
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.4e-14 84.0 125 42.4
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 5.1e-12 76.3 158 36.1
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 4.3e-11 73.2 105 41.9
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 9.6e-11 72.0 66 53.0
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 2.6e-08 63.9 71 43.7
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 3.4e-08 63.5 185 28.1
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 2.9e-07 60.5 83 42.2
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 2.5e-06 57.4 64 42.2
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 5.5e-06 56.2 67 40.3


User provided reference genes

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