Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0203s0012 Marchantia polymorpha HOM05D022175 ORTHO05D014010 1.9e-118 430.6 593 100.0
Mapoly0048s0080 Marchantia polymorpha HOM05D022175 ORTHO05D014010 1.3e-21 109.0 127 49.6
Mapoly0052s0127 Marchantia polymorpha HOM05D000071 ORTHO05D014010 3.0e-15 87.8 123 41.5
Mapoly0032s0028 Marchantia polymorpha HOM05D001705 ORTHO05D002725 1.1e-14 85.9 123 36.6
Mapoly0020s0097 Marchantia polymorpha HOM05D002120 ORTHO05D002217 7.4e-14 83.2 124 40.3
Mapoly0084s0028 Marchantia polymorpha HOM05D024351 ORTHO05D014010 1.3e-13 82.4 129 39.5
Mapoly0054s0114 Marchantia polymorpha HOM05D001705 ORTHO05D014010 1.7e-10 72.0 115 42.6
Mapoly0090s0078 Marchantia polymorpha HOM05D022608 ORTHO05D002217 2.9e-10 71.2 123 36.6
Mapoly0096s0031 Marchantia polymorpha HOM05D001705 ORTHO05D002725 5.0e-10 70.5 140 32.1
Pp3c21_6170 Physcomitrium patens HOM05D022175 ORTHO05D014010 1.1e-09 69.3 126 37.3
Mapoly0151s0025 Marchantia polymorpha HOM05D022608 ORTHO05D030101 4.2e-09 67.4 127 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1978 Anthoceros agrestis HOM05D010742 ORTHO05D038371 2.7e-08 64.7 134 34.3
Mapoly0001s0152 Marchantia polymorpha HOM05D024351 ORTHO05D005974 3.6e-08 64.3 116 35.3
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 4.7e-08 63.9 126 34.1
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 6.1e-08 63.5 126 34.1
Mapoly0008s0264 Marchantia polymorpha HOM05D001705 ORTHO05D002725 8.0e-08 63.2 122 29.5
Pp3c1_25110 Physcomitrium patens HOM05D001705 ORTHO05D002725 3.0e-07 61.2 124 32.3
DCAR_021489 Daucus carota HOM05D001705 ORTHO05D002725 5.2e-07 60.5 117 34.2
Nitab4.5_0002885g0040 Nicotiana tabacum HOM05D000872 ORTHO05D000455 5.2e-07 60.5 124 33.1
Thhalv10010003m.g Eutrema salsugineum HOM05D001705 ORTHO05D002725 6.8e-07 60.1 113 31.9
Gohir.D04G149600 Gossypium hirsutum HOM05D003705 ORTHO05D007730 8.8e-07 59.7 125 33.6
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 1.2e-06 59.3 110 34.5
Mapoly0100s0019 Marchantia polymorpha HOM05D024351 ORTHO05D014010 2.0e-06 58.5 122 28.7
AL1G47970 Arabidopsis lyrata HOM05D001705 ORTHO05D002725 2.6e-06 58.2 115 33.0
AT1G33590 Arabidopsis thaliana HOM05D001705 ORTHO05D002725 2.6e-06 58.2 115 33.0
Carub.0001s3175 Capsella rubella HOM05D001705 ORTHO05D002725 2.6e-06 58.2 116 32.8
Ciclev10019952m.g Citrus clementina HOM05D001705 ORTHO05D002725 2.6e-06 58.2 96 32.3
Duzib177G0070 Durio zibethinus HOM05D001705 ORTHO05D002725 2.6e-06 58.2 115 30.4
SEGI_10847 Sequoiadendron giganteum HOM05D002120 ORTHO05D002217 2.6e-06 58.2 127 32.3
Gorai.012G136100 Gossypium raimondii HOM05D003705 ORTHO05D007730 3.4e-06 57.8 125 32.8
Os11g0564900 Oryza sativa ssp. japonica HOM05D000071 ORTHO05D000029 3.4e-06 57.8 126 30.2
QL09p001786 Quercus lobata HOM05D001705 ORTHO05D002725 3.4e-06 57.8 100 31.0
Lj7A419T37 Lonicera japonica HOM05D001705 ORTHO05D002725 4.4e-06 57.4 109 30.3
Prupe.8G006300 Prunus persica HOM05D001705 ORTHO05D002725 4.4e-06 57.4 129 30.2
Thecc.03G189200 Theobroma cacao HOM05D001705 ORTHO05D002725 4.4e-06 57.4 100 31.0
Gohir.A04G109488 Gossypium hirsutum HOM05D003705 ORTHO05D007730 5.7e-06 57.0 125 32.8
Manes.18G115700 Manihot esculenta HOM05D001705 ORTHO05D002725 5.7e-06 57.0 100 31.0
Pp3c25_12800 Physcomitrium patens HOM05D001705 ORTHO05D002725 5.7e-06 57.0 137 34.3
Carub.0003s2745 Capsella rubella HOM05D001705 ORTHO05D002725 7.5e-06 56.6 129 31.0
Cc06_g16270 Coffea canephora HOM05D001169 ORTHO05D001002 7.5e-06 56.6 83 41.0
Potri.013G098900 Populus trichocarpa HOM05D001705 ORTHO05D002725 7.5e-06 56.6 120 30.0
Thhalv10007598m.g Eutrema salsugineum HOM05D001705 ORTHO05D002725 9.7e-06 56.2 107 34.6
Hma1.2p1_0238F.1_g099660 Hydrangea macrophylla HOM05D001705 ORTHO05D002725 9.7e-06 56.2 106 29.2
Hma1.2p1_1771F.1_g301630 Hydrangea macrophylla HOM05D001705 ORTHO05D002725 9.7e-06 56.2 106 29.2
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 9.7e-06 56.2 126 31.0


User provided reference genes

Program Settings