Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0194s0013 Marchantia polymorpha HOM05D000906 ORTHO05D000713 6.7e-215 750.4 367 100.0
Mapoly0010s0216 Marchantia polymorpha HOM05D000906 ORTHO05D000713 2.3e-146 522.7 362 73.2
Mapoly0137s0023 Marchantia polymorpha HOM05D000906 ORTHO05D000713 3.9e-138 495.4 367 68.9
Mapoly0010s0218 Marchantia polymorpha HOM05D000906 ORTHO05D000713 6.2e-136 488.0 370 67.3
Mapoly0166s0024 Marchantia polymorpha HOM05D000906 ORTHO05D000713 7.6e-126 454.5 364 63.2
Mapoly0166s0025 Marchantia polymorpha HOM05D000906 ORTHO05D000713 9.9e-126 454.1 436 56.9
Mapoly0166s0023 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.9e-121 439.9 371 60.6
Mapoly0004s0210 Marchantia polymorpha HOM05D000906 ORTHO05D000713 3.7e-120 435.6 295 74.2
Mapoly0085s0016 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.9e-113 413.3 333 63.1
Mapoly0004s0211 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.6e-104 383.6 335 60.0
Mapoly0497s0001 Marchantia polymorpha HOM05D000906 ORTHO05D000713 2.8e-104 382.9 326 62.0
Mapoly0004s0212 Marchantia polymorpha HOM05D000906 ORTHO05D000713 2.2e-96 356.7 289 65.7
Mapoly0255s0002 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.1e-95 354.4 371 54.2
Mapoly0106s0001 Marchantia polymorpha HOM05D000906 ORTHO05D000713 6.9e-95 351.7 360 54.4
Mapoly0631s0001 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.7e-88 330.5 324 55.6
Mapoly0022s0064 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.5e-84 317.4 317 54.9
Mapoly0046s0047 Marchantia polymorpha HOM05D000906 ORTHO05D000713 2.2e-64 250.4 369 43.1
Mapoly0059s0049 Marchantia polymorpha HOM05D000906 ORTHO05D000713 7.3e-60 235.3 333 44.1
Mapoly0108s0045 Marchantia polymorpha HOM05D020945 ORTHO05D000713 9.2e-55 218.4 350 40.0
Mapoly2122s0001 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.8e-18 97.8 298 31.5
Pp3c26_3430 Physcomitrium patens HOM05D000906 ORTHO05D000713 1.9e-15 87.8 256 30.1
EL10Ac7g18147 Beta vulgaris HOM05D000906 ORTHO05D000713 3.0e-13 80.5 344 26.7
HanXRQChr10g0316981 Helianthus annuus HOM05D000906 ORTHO05D000713 3.0e-13 80.5 321 26.2
TPR.G38010 Trifolium pratense HOM05D000906 ORTHO05D000713 1.1e-12 78.6 373 25.7
Ciclev10020959m.g Citrus clementina HOM05D000906 ORTHO05D000713 1.9e-12 77.8 328 26.5
Mapoly0128s0002 Marchantia polymorpha HOM05D000906 ORTHO05D000713 2.5e-12 77.4 229 31.9
SMO172G0092 Selaginella moellendorffii HOM05D000906 ORTHO05D000713 4.3e-12 76.6 325 26.2
Zm00001eb203780 Zea mays HOM05D000906 ORTHO05D000713 4.3e-12 76.6 307 25.1
Os02g0286200 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 5.6e-12 76.3 304 24.7
SMO172G0135 Selaginella moellendorffii HOM05D009802 ORTHO05D000713 7.4e-12 75.9 322 25.8
Mapoly1893s0001 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.3e-11 75.1 224 29.9
SMO172G0075 Selaginella moellendorffii HOM05D000906 ORTHO05D000713 2.8e-11 73.9 322 25.5
Ah.14g084000 Amaranthus hybridus HOM05D000906 ORTHO05D000713 4.8e-11 73.2 347 26.2
AUR62041308 Chenopodium quinoa HOM05D000906 ORTHO05D000713 4.8e-11 73.2 285 27.0
PSO135G0031 Papaver somniferum HOM05D000906 ORTHO05D000713 8.1e-11 72.4 327 26.9
AagrBONN_evm.TU.Sc2ySwM_228.1484 Anthoceros agrestis HOM05D000906 ORTHO05D000713 1.4e-10 71.6 298 25.2
EL10Ac7g18143 Beta vulgaris HOM05D000906 ORTHO05D000713 1.4e-10 71.6 345 26.4
CAN.G968.8 Capsicum annuum HOM05D000906 ORTHO05D000713 1.4e-10 71.6 358 24.3
Gorai.008G269100 Gossypium raimondii HOM05D000906 ORTHO05D000713 1.4e-10 71.6 331 23.6
Thecc.03G197900 Theobroma cacao HOM05D000906 ORTHO05D000713 1.4e-10 71.6 339 26.3
ECA233G4442 Erigeron canadensis HOM05D000906 ORTHO05D000713 1.8e-10 71.2 322 26.1
Os01g0751600 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 1.8e-10 71.2 239 26.4
Aa31LG11G3450 Aethionema arabicum HOM05D000906 ORTHO05D000713 2.4e-10 70.9 346 24.3
Rhsim02G0121600 Rhododendron simsii HOM05D000906 ORTHO05D000713 2.4e-10 70.9 332 25.0
A02p24770 Brassica napus HOM05D000906 ORTHO05D000713 3.1e-10 70.5 335 23.6
BraA02t07465Z Brassica rapa HOM05D000906 ORTHO05D000713 3.1e-10 70.5 335 23.6
Ca_24499_v3 Cicer arietinum L. HOM05D000331 ORTHO05D000732 3.1e-10 70.5 357 24.9
EL10Ac7g18145 Beta vulgaris HOM05D000906 ORTHO05D000713 5.3e-10 69.7 311 27.7
Migut.M00559 Erythranthe guttata HOM05D000906 ORTHO05D000713 6.9e-10 69.3 251 27.1
Gohir.A12G250200 Gossypium hirsutum HOM05D000906 ORTHO05D000713 6.9e-10 69.3 332 23.5
Gohir.A05G414500 Gossypium hirsutum HOM05D000906 ORTHO05D000713 9.0e-10 68.9 344 25.0
CDE10G0529 Ceratophyllum demersum HOM05D000906 ORTHO05D000713 1.2e-09 68.6 335 26.0
Cfa016224 Carpinus fangiana HOM05D000906 ORTHO05D000713 1.5e-09 68.2 335 24.8
Mapoly0014s0175 Marchantia polymorpha HOM05D000906 ORTHO05D000713 1.5e-09 68.2 303 26.7
TWI39G0521 Tripterygium wilfordii HOM05D000906 ORTHO05D000713 1.5e-09 68.2 298 25.8
Gorai.012G002700 Gossypium raimondii HOM05D000906 ORTHO05D000713 2.0e-09 67.8 340 25.0
Peaxi162Scf00074g00735 Petunia axillaris HOM05D000906 ORTHO05D000713 2.0e-09 67.8 330 25.8
Peaxi162Scf00111g00230 Petunia axillaris HOM05D000906 ORTHO05D000713 2.6e-09 67.4 279 25.1
Lj3P905T5 Lonicera japonica HOM05D000906 ORTHO05D000713 3.4e-09 67.0 328 25.0
Zm00001eb153450 Zea mays HOM05D000906 ORTHO05D000713 4.5e-09 66.6 238 26.1
Zm00001eb370890 Zea mays HOM05D000906 ORTHO05D000713 4.5e-09 66.6 241 27.4
PSO135G0424 Papaver somniferum HOM05D000906 ORTHO05D000713 5.8e-09 66.2 297 24.9
Gohir.D04G001600 Gossypium hirsutum HOM05D000906 ORTHO05D000713 7.6e-09 65.9 340 24.7
Manes.01G182501 Manihot esculenta HOM05D000906 ORTHO05D000713 7.6e-09 65.9 326 26.4
BcaC03g16134 Brassica carinata HOM05D000906 ORTHO05D000713 9.9e-09 65.5 334 22.5
Haze_00219 Corylus avellana HOM05D000906 ORTHO05D000713 9.9e-09 65.5 328 24.7
TAR636G3694 Trochodendron aralioides HOM05D000906 ORTHO05D000713 9.9e-09 65.5 317 25.2
AT5G24210 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 1.3e-08 65.1 329 23.1
Dinv29287 Davidia involucrata HOM05D000906 ORTHO05D000713 1.3e-08 65.1 331 25.7
Nitab4.5_0002209g0050 Nicotiana tabacum HOM05D000906 ORTHO05D000713 1.3e-08 65.1 173 28.3
THA.LOC104798896 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 1.3e-08 65.1 341 26.1
TAR636G0993 Trochodendron aralioides HOM05D000906 ORTHO05D000713 1.3e-08 65.1 304 24.3
HPP92_023267 Vanilla planifolia HOM05D000906 ORTHO05D000713 1.3e-08 65.1 244 29.1
HPP92_023298 Vanilla planifolia HOM05D000906 ORTHO05D000713 1.3e-08 65.1 244 29.5
VMungo1215G2633 Vigna mungo HOM05D000906 ORTHO05D000713 1.3e-08 65.1 346 24.9
CSS0038077 Camellia sinensis var. sinensis HOM05D000906 ORTHO05D000713 1.7e-08 64.7 302 25.2
Ca_24498_v3 Cicer arietinum L. HOM05D000906 ORTHO05D000713 1.7e-08 64.7 305 25.6
ECA232G3720 Erigeron canadensis HOM05D000906 ORTHO05D000713 1.7e-08 64.7 333 25.8
Rhsim02G0121100 Rhododendron simsii HOM05D000906 ORTHO05D000713 1.7e-08 64.7 251 27.1
RhsimUnG0233400 Rhododendron simsii HOM05D000906 ORTHO05D000713 1.7e-08 64.7 315 25.1
Solyc03g083370.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 1.7e-08 64.7 331 23.6
TPR.G15431 Trifolium pratense HOM05D000906 ORTHO05D000713 1.7e-08 64.7 206 26.7
Oeu033981.1 Olea europaea HOM05D000906 ORTHO05D000713 2.2e-08 64.3 282 24.1
unitig_747.g21600 Utricularia gibba HOM05D000906 ORTHO05D000713 2.2e-08 64.3 146 30.1
SEGI_23288 Sequoiadendron giganteum HOM05D000906 ORTHO05D000713 2.9e-08 63.9 342 26.0
Sopen03g023120 Solanum pennellii HOM05D000906 ORTHO05D000713 2.9e-08 63.9 331 23.3
SGA_v2.0_scaffold697G53476 Striga asiatica HOM05D000906 ORTHO05D000713 2.9e-08 63.9 227 29.1
EL10Ac7g18144 Beta vulgaris HOM05D000906 ORTHO05D000713 3.8e-08 63.5 320 25.9
Medtr5g009140 Medicago truncatula HOM05D000906 ORTHO05D000713 3.8e-08 63.5 250 26.0
QL09p009208 Quercus lobata HOM05D000906 ORTHO05D000713 3.8e-08 63.5 340 25.9
Rhsim02G0184300 Rhododendron simsii HOM05D000906 ORTHO05D000713 3.8e-08 63.5 315 24.8
TAR636G1316 Trochodendron aralioides HOM05D000906 ORTHO05D000713 3.8e-08 63.5 345 23.8
BcaB02g09131 Brassica carinata HOM05D000906 ORTHO05D000713 4.9e-08 63.2 337 23.4
CAN.G968.7 Capsicum annuum HOM05D000906 ORTHO05D000713 4.9e-08 63.2 341 25.2
PSO384G1964 Papaver somniferum HOM05D000906 ORTHO05D000713 4.9e-08 63.2 308 26.0
PSO384G4424 Papaver somniferum HOM05D000906 ORTHO05D000713 4.9e-08 63.2 299 25.1
TAR636G2621 Trochodendron aralioides HOM05D000906 ORTHO05D000713 4.9e-08 63.2 335 24.8
ECA232G0807 Erigeron canadensis HOM05D000906 ORTHO05D000713 6.4e-08 62.8 337 24.0
Lsat_1_v5_gn_2_18740 Lactuca sativa HOM05D000906 ORTHO05D000713 6.4e-08 62.8 340 25.0
THA.LOC104815839 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 6.4e-08 62.8 239 27.6
TAR636G2971 Trochodendron aralioides HOM05D000906 ORTHO05D000713 6.4e-08 62.8 335 24.5
Dinv35329 Davidia involucrata HOM05D000906 ORTHO05D000713 8.4e-08 62.4 304 26.0
Nitab4.5_0003104g0090 Nicotiana tabacum HOM05D000906 ORTHO05D000713 8.4e-08 62.4 173 27.7
TPR.G3417 Trifolium pratense HOM05D000906 ORTHO05D000713 8.4e-08 62.4 337 24.3
PSO384G3151 Papaver somniferum HOM05D000906 ORTHO05D000713 1.1e-07 62.0 243 27.2
FAN20G1126 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.4e-07 61.6 315 25.1
FAN27G1183 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.4e-07 61.6 315 25.1
MBI07_g15284_MAGBIO Magnolia biondii HOM05D000906 ORTHO05D000713 1.4e-07 61.6 239 29.3
MBI07_g26371_MAGBIO Magnolia biondii HOM05D000906 ORTHO05D000713 1.4e-07 61.6 239 29.3
Nitab4.5_0001210g0120 Nicotiana tabacum HOM05D000906 ORTHO05D000713 1.4e-07 61.6 328 26.2
Thhalv10004425m.g Eutrema salsugineum HOM05D000906 ORTHO05D000713 1.9e-07 61.2 311 25.7
HanXRQChr15g0493561 Helianthus annuus HOM05D000906 ORTHO05D000713 1.9e-07 61.2 341 24.9
PSO135G1051 Papaver somniferum HOM05D000906 ORTHO05D000713 1.9e-07 61.2 243 27.2
Actinidia08644 Actinidia chinensis HOM05D000906 ORTHO05D000713 2.4e-07 60.8 278 27.0
AUR62006097 Chenopodium quinoa HOM05D000906 ORTHO05D000713 2.4e-07 60.8 305 22.6
Rhsim02G0121800 Rhododendron simsii HOM05D000906 ORTHO05D000713 2.4e-07 60.8 248 28.2
TPR.G25609 Trifolium pratense HOM05D000906 ORTHO05D000713 2.4e-07 60.8 367 24.3
AT5G24230 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 3.2e-07 60.5 305 24.3
arahy.Tifrunner.gnm1.ann1.1IA0LX Arachis hypogaea HOM05D000906 ORTHO05D000713 3.2e-07 60.5 274 26.6
BcaB07g29899 Brassica carinata HOM05D000906 ORTHO05D000713 3.2e-07 60.5 306 25.5
Carub.0006s2195 Capsella rubella HOM05D000906 ORTHO05D000713 3.2e-07 60.5 236 25.4
Phvul.002G164900 Phaseolus vulgaris HOM05D000906 ORTHO05D000713 3.2e-07 60.5 350 24.3
Psat7g025000 Pisum sativum HOM05D000906 ORTHO05D000713 3.2e-07 60.5 346 24.6
Thecc.03G299300 Theobroma cacao HOM05D000906 ORTHO05D000713 3.2e-07 60.5 338 24.9
Sopen08g030700 Solanum pennellii HOM05D000906 ORTHO05D000713 4.2e-07 60.1 329 25.8
AL6G35650 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 5.5e-07 59.7 306 23.9
CAN.G1804.13 Capsicum annuum HOM05D000906 ORTHO05D000713 5.5e-07 59.7 200 28.5
Cpa.g.sc79.19 Carica papaya HOM05D000906 ORTHO05D000713 5.5e-07 59.7 334 24.0
AUR62006098 Chenopodium quinoa HOM05D000906 ORTHO05D000713 5.5e-07 59.7 332 22.6
Phvul.008G193600 Phaseolus vulgaris HOM05D000906 ORTHO05D000713 5.5e-07 59.7 229 27.1
BolC2t12109H Brassica oleracea HOM05D000906 ORTHO05D000713 7.1e-07 59.3 305 25.2
Glyma.02G285200 Glycine max HOM05D000906 ORTHO05D000713 7.1e-07 59.3 228 25.9
Nitab4.5_0014599g0010 Nicotiana tabacum HOM05D000906 ORTHO05D000713 7.1e-07 59.3 297 23.6
Oeu020050.1 Olea europaea HOM05D000906 ORTHO05D000713 7.1e-07 59.3 236 27.1
SalBow8G2291 Salvia bowleyana HOM05D000906 ORTHO05D000713 7.1e-07 59.3 228 27.2
Solyc08g082450.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 7.1e-07 59.3 329 25.8
TPR.G17994 Trifolium pratense HOM05D000906 ORTHO05D000713 7.1e-07 59.3 267 24.7
Actinidia08643 Actinidia chinensis HOM05D000906 ORTHO05D000713 9.3e-07 58.9 363 23.1
CARHR189330 Cardamine hirsuta HOM05D000906 ORTHO05D000713 9.3e-07 58.9 331 24.5
Eucgr.K01222 Eucalyptus grandis HOM05D000906 ORTHO05D000713 9.3e-07 58.9 281 26.7
Gohir.A08G216566 Gossypium hirsutum HOM05D000906 ORTHO05D000713 9.3e-07 58.9 337 22.8
Sc25g0000890 Simmondsia chinensis HOM05D000906 ORTHO05D000713 9.3e-07 58.9 347 23.9
TPR.G25582 Trifolium pratense HOM05D000906 ORTHO05D000713 9.3e-07 58.9 307 24.4
arahy.Tifrunner.gnm1.ann1.UGC1SE Arachis hypogaea HOM05D000906 ORTHO05D000713 1.2e-06 58.5 274 26.6
BcaC03g18001 Brassica carinata HOM05D000906 ORTHO05D000713 1.2e-06 58.5 305 25.2
C02p60580 Brassica napus HOM05D000906 ORTHO05D000713 1.2e-06 58.5 305 25.2
PGSC0003DMG400009080 Solanum tuberosum HOM05D000906 ORTHO05D000713 1.2e-06 58.5 301 23.3
SGA_v2.0_scaffold44G16797 Striga asiatica HOM05D000906 ORTHO05D000713 1.2e-06 58.5 260 28.8
Aa31LG1G7930 Aethionema arabicum HOM05D000906 ORTHO05D000713 1.6e-06 58.2 261 25.7
AUR62017598 Chenopodium quinoa HOM05D000906 ORTHO05D000713 1.6e-06 58.2 287 23.7
Lalb_Chr15g0081261 Lupinus albus HOM05D000906 ORTHO05D000713 1.6e-06 58.2 280 26.1
GSVIVG01020848001 Vitis vinifera HOM05D000906 ORTHO05D000713 1.6e-06 58.2 237 27.0
ATR0585G053 Amborella trichopoda HOM05D000906 ORTHO05D000713 2.1e-06 57.8 238 23.9
EL10Ac3g05291 Beta vulgaris HOM05D000906 ORTHO05D000713 2.1e-06 57.8 281 25.3
AUR62019395 Chenopodium quinoa HOM05D000906 ORTHO05D000713 2.1e-06 57.8 256 23.0
Glyma.14G029600 Glycine max HOM05D000906 ORTHO05D000713 2.1e-06 57.8 226 26.5
Peaxi162Scf00550g00531 Petunia axillaris HOM05D000906 ORTHO05D000713 2.1e-06 57.8 314 22.3
Ah.01g013670 Amaranthus hybridus HOM05D000906 ORTHO05D000713 2.7e-06 57.4 227 24.7
CANSAT21G1627 Cannabis sativa HOM05D000906 ORTHO05D000713 2.7e-06 57.4 333 23.4
Cc08_g16170 Coffea canephora HOM05D000906 ORTHO05D000713 2.7e-06 57.4 328 25.9
Duzib068G0856 Durio zibethinus HOM05D000906 ORTHO05D000713 2.7e-06 57.4 332 23.8
Gohir.A12G237100 Gossypium hirsutum HOM05D000906 ORTHO05D000713 2.7e-06 57.4 338 22.8
Sp2g23130 Schrenkiella parvula HOM05D000906 ORTHO05D000713 2.7e-06 57.4 257 28.0
Solyc10g007710.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 2.7e-06 57.4 184 28.8
Sopen10g003620 Solanum pennellii HOM05D000906 ORTHO05D000713 2.7e-06 57.4 182 28.6
CARHR189310 Cardamine hirsuta HOM05D000906 ORTHO05D000713 3.5e-06 57.0 256 25.8
SalBow7G0675 Salvia bowleyana HOM05D000906 ORTHO05D000713 3.5e-06 57.0 236 25.8
TAR626G1229 Trochodendron aralioides HOM05D000906 ORTHO05D000713 3.5e-06 57.0 258 27.1
TAR626G1247 Trochodendron aralioides HOM05D000906 ORTHO05D000713 3.5e-06 57.0 258 27.1
Zm00001eb122350 Zea mays HOM05D000906 ORTHO05D000713 3.5e-06 57.0 207 26.1
Actinidia03642 Actinidia chinensis HOM05D000906 ORTHO05D000713 4.6e-06 56.6 241 24.9
CAN.G585.24 Capsicum annuum HOM05D000906 ORTHO05D000713 4.6e-06 56.6 237 27.0
Medtr5g091200 Medicago truncatula HOM05D000906 ORTHO05D000713 4.6e-06 56.6 241 26.6
Nn4g26540 Nelumbo nucifera HOM05D000906 ORTHO05D000713 4.6e-06 56.6 272 25.0
Nitab4.5_0006775g0070 Nicotiana tabacum HOM05D000906 ORTHO05D000713 4.6e-06 56.6 334 25.4
PSO384G3467 Papaver somniferum HOM05D000906 ORTHO05D000713 4.6e-06 56.6 225 28.0
FvH4_2g24630 Fragaria vesca HOM05D000906 ORTHO05D000713 6.0e-06 56.2 262 26.7
PGSC0003DMG400021286 Solanum tuberosum HOM05D000906 ORTHO05D000713 6.0e-06 56.2 182 28.0
AL8G25080 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 7.9e-06 55.8 248 26.6
MSTRG.6740 Avicennia marina HOM05D000906 ORTHO05D000713 7.9e-06 55.8 227 27.8
EL10Ac9g22846 Beta vulgaris HOM05D000906 ORTHO05D000713 7.9e-06 55.8 236 26.7
CSS0032041 Camellia sinensis var. sinensis HOM05D000906 ORTHO05D000713 7.9e-06 55.8 239 25.5
Duzib068G1046 Durio zibethinus HOM05D000906 ORTHO05D000713 7.9e-06 55.8 337 24.9
Sed0020209 Sechium edule HOM05D000906 ORTHO05D000713 7.9e-06 55.8 258 25.2


User provided reference genes

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