Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.8e-111 406.0 207 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 4.6e-35 152.1 210 42.4
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 4.6e-35 152.1 186 48.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.0e-34 149.4 181 47.0
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 5.0e-34 148.7 184 46.7
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 5.0e-34 148.7 185 47.0
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 6.6e-34 148.3 185 47.6
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 8.6e-34 147.9 186 47.3
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 8.6e-34 147.9 184 46.7
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.1e-33 147.5 185 46.5
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.5e-33 147.1 185 46.5
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.5e-33 147.1 185 45.4
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.9e-33 146.7 186 45.7
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 1.9e-33 146.7 184 45.7
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.9e-33 146.7 166 50.6
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.9e-33 146.7 185 47.0
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.5e-33 146.4 184 46.2
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 3.3e-33 146.0 184 46.2
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 4.3e-33 145.6 184 46.7
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 7.3e-33 144.8 186 47.8
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 9.5e-33 144.4 185 45.9
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-32 144.1 184 46.2
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.6e-32 143.7 184 46.7
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.6e-32 143.7 184 46.2
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.1e-32 143.3 185 45.4
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 2.1e-32 143.3 185 45.4
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.8e-32 142.9 186 46.2
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 2.8e-32 142.9 185 45.4
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 3.6e-32 142.5 184 44.6
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 3.6e-32 142.5 184 44.6
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 3.6e-32 142.5 186 46.8
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 4.7e-32 142.1 185 46.5
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 4.7e-32 142.1 186 45.7
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.7e-32 142.1 186 46.2
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 4.7e-32 142.1 186 46.2
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.7e-32 142.1 185 45.4
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.7e-32 142.1 185 45.4
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 4.7e-32 142.1 185 45.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 6.2e-32 141.7 185 44.9
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 6.2e-32 141.7 184 44.6
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 6.2e-32 141.7 184 44.6
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 6.2e-32 141.7 184 44.6
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 6.2e-32 141.7 185 44.3
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 6.2e-32 141.7 185 47.0
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 8.0e-32 141.4 185 45.4
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 8.0e-32 141.4 187 46.5
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.1e-31 141.0 186 45.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.1e-31 141.0 184 44.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.4e-31 140.6 184 45.1
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.4e-31 140.6 185 45.9
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 1.8e-31 140.2 158 49.4
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.8e-31 140.2 192 43.8
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 1.8e-31 140.2 184 44.0
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.3e-31 139.8 185 44.9
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 3.1e-31 139.4 185 44.9
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 4.0e-31 139.0 185 44.9
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 4.0e-31 139.0 185 44.9
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 4.0e-31 139.0 192 43.8
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 4.0e-31 139.0 192 43.8
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 5.2e-31 138.7 185 45.9
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 6.8e-31 138.3 182 45.6
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 6.8e-31 138.3 190 43.7
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 8.9e-31 137.9 184 45.1
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.5e-30 137.1 187 44.9
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.5e-30 137.1 186 44.6
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.0e-30 136.7 185 45.4
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 2.0e-30 136.7 188 44.7
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 2.0e-30 136.7 150 51.3
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 2.0e-30 136.7 185 43.8
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 2.6e-30 136.3 185 43.2
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 3.4e-30 136.0 185 44.3
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 4.4e-30 135.6 185 42.7
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 5.8e-30 135.2 184 45.1
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 5.8e-30 135.2 184 45.1
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 9.8e-30 134.4 185 42.7
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 1.3e-29 134.0 185 43.8
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.7e-29 133.7 183 44.8
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.7e-29 133.7 185 44.9
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 2.2e-29 133.3 188 44.1
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 4.9e-29 132.1 185 42.2
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 4.9e-29 132.1 187 44.4
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 6.4e-29 131.7 186 43.0
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 6.4e-29 131.7 184 44.6
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 1.1e-28 131.0 187 41.2
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.1e-28 131.0 185 42.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.1e-28 131.0 138 50.7
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.4e-28 130.6 190 43.7
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.4e-28 129.8 185 43.2
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.4e-28 129.8 185 43.2
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.2e-28 129.4 148 49.3
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 3.2e-28 129.4 185 43.2
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.2e-28 129.4 185 42.7
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.2e-28 129.4 185 42.7
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 3.2e-28 129.4 185 41.6
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 5.4e-28 128.6 222 37.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.0e-28 128.3 186 43.0
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 9.2e-28 127.9 195 43.1
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.2e-27 127.5 137 45.3
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 1.7e-26 123.6 153 48.4
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 3.3e-25 119.4 165 41.8
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 7.3e-25 118.2 208 37.5
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-24 117.5 161 44.1
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 3.1e-23 112.8 137 46.7
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 8.9e-23 111.3 206 37.4
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 2.6e-22 109.8 251 32.7
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 3.4e-22 109.4 145 44.8
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 4.4e-22 109.0 136 47.8
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.7e-21 107.1 110 50.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.2e-21 106.7 113 48.7
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 2.2e-21 106.7 98 56.1
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.7e-21 105.9 135 45.9
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.2e-20 102.8 101 53.5
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-18 97.4 110 46.4
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 8.6e-18 94.7 196 34.7
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 8.6e-18 94.7 128 42.2
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.2e-16 90.9 112 43.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.2e-14 84.3 96 46.9
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.0e-10 69.7 71 49.3
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 3.0e-10 69.7 95 43.2
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.1e-09 67.8 143 33.6
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 4.4e-06 55.8 135 31.9


User provided reference genes

Program Settings