Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 0.0e+00 1181.0 722 100.0
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 1.7e-49 201.8 718 36.1
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 2.3e-49 201.4 721 35.2
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 3.0e-49 201.1 709 36.7
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 3.9e-49 200.7 735 32.7
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.5e-48 198.7 707 38.3
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 1.3e-47 195.7 709 30.5
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 8.1e-47 193.0 680 30.6
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.4e-46 192.2 715 32.0
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 1.4e-46 192.2 705 33.3
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 1.8e-46 191.8 732 35.0
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 3.1e-46 191.0 727 37.4
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 3.4e-45 187.6 704 35.5
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 9.9e-45 186.0 713 30.0
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 2.2e-44 184.9 698 36.1
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 4.9e-44 183.7 671 34.3
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 8.4e-44 183.0 757 30.9
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 5.5e-43 180.3 676 33.7
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 1.2e-42 179.1 710 30.4
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.6e-42 178.7 757 30.6
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.7e-42 177.9 625 35.8
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 3.5e-42 177.6 728 33.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 4.6e-42 177.2 731 33.7
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 1.8e-41 175.3 674 29.2
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.8e-41 175.3 785 31.1
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 2.3e-41 174.9 739 31.5
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.0e-41 174.5 714 32.6
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 5.1e-41 173.7 388 34.8
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 6.7e-41 173.3 668 29.2
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.5e-40 172.2 716 34.4
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 2.5e-40 171.4 661 29.8
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 4.3e-40 170.6 666 38.3
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 5.6e-40 170.2 761 30.1
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 7.4e-40 169.9 729 33.1
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.3e-39 169.1 613 32.3
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 2.1e-39 168.3 688 28.2
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.8e-39 167.9 700 34.9
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 3.7e-39 167.5 721 32.2
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 4.8e-39 167.2 745 32.3
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 8.1e-39 166.4 692 33.8
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.4e-38 165.6 666 36.3
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 1.4e-38 165.6 676 34.0
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.8e-38 165.2 670 33.1
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.4e-38 164.9 669 33.6
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 3.1e-38 164.5 721 33.3
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 4.0e-38 164.1 733 32.9
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 9.0e-38 162.9 664 36.1
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 1.2e-37 162.5 695 31.7
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 4.5e-37 160.6 706 33.6
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.0e-36 159.5 720 31.4
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.0e-36 159.5 716 33.9
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 1.7e-36 158.7 757 30.1
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 1.7e-36 158.7 719 27.5
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 2.2e-36 158.3 719 31.6
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.2e-36 158.3 668 34.3
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 2.9e-36 157.9 724 31.6
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 2.9e-36 157.9 705 33.2
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 6.5e-36 156.8 719 29.5
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 6.5e-36 156.8 686 32.5
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 8.4e-36 156.4 702 34.8
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 8.4e-36 156.4 674 31.6
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.1e-35 156.0 678 28.9
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 1.1e-35 156.0 701 32.4
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 1.1e-35 156.0 696 32.6
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 1.9e-35 155.2 696 32.6
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 4.2e-35 154.1 668 33.4
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 5.5e-35 153.7 670 31.9
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 7.1e-35 153.3 718 29.8
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 9.3e-35 152.9 734 31.5
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 9.3e-35 152.9 663 35.1
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.3e-35 152.9 771 29.2
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.1e-34 151.8 726 31.4
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 2.1e-34 151.8 739 31.4
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 2.7e-34 151.4 748 29.8
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 4.6e-34 150.6 709 33.1
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 4.6e-34 150.6 744 29.3
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 7.9e-34 149.8 379 38.0
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 7.9e-34 149.8 685 30.5
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 1.0e-33 149.4 610 35.7
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 1.3e-33 149.1 667 34.8
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 3.0e-33 147.9 688 33.7
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 4.3e-32 144.1 718 34.7
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.3e-31 142.5 741 30.8
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 2.8e-31 141.4 710 32.4
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.4e-30 138.3 702 30.3
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 3.1e-30 137.9 715 31.3
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 9.0e-30 136.3 676 29.4
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 1.2e-29 136.0 389 31.9
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 2.0e-29 135.2 745 30.1
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 3.4e-29 134.4 741 30.2
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 5.9e-29 133.7 706 30.0
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.2e-28 131.7 683 34.0
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.4e-27 129.0 747 29.6
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 3.2e-27 127.9 402 32.3
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 3.2e-27 127.9 672 36.9
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 4.2e-27 127.5 713 31.6
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 5.5e-27 127.1 714 29.1
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 7.2e-27 126.7 706 33.9
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 1.2e-26 125.9 717 33.2
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 2.1e-26 125.2 736 29.9
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 2.7e-26 124.8 715 29.5
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 7.9e-26 123.2 704 33.4
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.0e-25 121.3 391 31.5
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 5.1e-25 120.6 703 30.2
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 1.9e-24 118.6 308 33.8
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 2.5e-24 118.2 379 31.9
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 5.7e-24 117.1 201 39.8
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.1e-22 112.8 727 30.5
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 2.4e-22 111.7 716 32.5
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 6.9e-22 110.2 669 32.0
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 9.0e-22 109.8 356 32.0
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 2.0e-21 108.6 727 30.4
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 1.3e-20 105.9 727 30.5
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-19 102.4 212 42.5
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.9e-19 102.1 727 30.4
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 2.1e-18 98.6 680 30.3
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.6e-18 97.4 680 30.4
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 1.7e-15 89.0 293 28.0
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 2.2e-15 88.6 418 24.2
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.1e-14 86.3 412 23.5
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 6.5e-12 77.0 161 41.6
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 5.1e-09 67.4 105 35.2
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 5.7e-08 63.9 153 28.1
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 6.3e-07 60.5 120 30.0
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.4e-06 58.5 86 39.5


User provided reference genes

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