Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.9e-236 821.2 457 100.0
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 3.7e-77 293.1 341 47.2
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 1.1e-73 281.6 341 44.6
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.2e-72 278.1 340 45.3
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 4.6e-72 276.2 328 46.3
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 7.9e-72 275.4 329 45.3
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 1.8e-71 274.2 320 46.2
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 2.3e-71 273.9 329 46.5
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.5e-70 271.2 328 46.0
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 1.5e-70 271.2 329 45.0
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 2.5e-70 270.4 335 44.5
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 2.5e-70 270.4 328 45.1
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 3.3e-70 270.0 328 45.4
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 4.3e-70 269.6 328 46.0
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 4.3e-70 269.6 329 43.8
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 5.6e-70 269.2 341 46.0
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 5.6e-70 269.2 309 46.3
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 7.4e-70 268.9 339 44.2
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 7.4e-70 268.9 341 46.0
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 7.4e-70 268.9 326 43.9
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 9.6e-70 268.5 329 45.3
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 1.3e-69 268.1 337 44.8
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 1.3e-69 268.1 339 44.8
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 1.3e-69 268.1 328 44.8
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 1.3e-69 268.1 328 44.8
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 1.6e-69 267.7 328 45.1
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 2.1e-69 267.3 346 42.8
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 2.1e-69 267.3 328 45.4
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 2.1e-69 267.3 328 45.4
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 2.1e-69 267.3 328 45.1
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 2.1e-69 267.3 329 44.4
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 2.1e-69 267.3 333 44.7
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 2.8e-69 266.9 329 43.8
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 2.8e-69 266.9 341 43.7
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 2.8e-69 266.9 329 44.7
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 2.8e-69 266.9 328 45.1
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 2.8e-69 266.9 328 45.1
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 2.8e-69 266.9 329 44.7
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 2.8e-69 266.9 328 45.1
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 2.8e-69 266.9 329 44.4
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 4.8e-69 266.2 319 45.1
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 4.8e-69 266.2 319 45.1
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 4.8e-69 266.2 342 43.6
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 4.8e-69 266.2 328 45.1
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 6.2e-69 265.8 329 43.8
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 6.2e-69 265.8 329 45.0
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 6.2e-69 265.8 328 45.1
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 8.2e-69 265.4 328 44.5
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 8.2e-69 265.4 329 44.7
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 8.2e-69 265.4 328 45.1
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.1e-68 265.0 328 43.9
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 1.1e-68 265.0 328 44.8
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.1e-68 265.0 329 45.0
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 1.4e-68 264.6 329 44.4
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 1.4e-68 264.6 328 44.8
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 1.4e-68 264.6 328 44.8
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 1.4e-68 264.6 325 46.2
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 1.4e-68 264.6 329 44.4
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 1.8e-68 264.2 328 44.2
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 1.8e-68 264.2 328 44.2
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 2.4e-68 263.8 328 44.2
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 2.4e-68 263.8 328 44.2
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 2.4e-68 263.8 396 40.7
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 2.4e-68 263.8 329 43.5
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 2.4e-68 263.8 328 44.5
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 3.1e-68 263.5 320 45.3
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 3.1e-68 263.5 329 45.3
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 3.1e-68 263.5 328 43.9
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 3.1e-68 263.5 328 44.5
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 4.0e-68 263.1 340 43.8
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 4.0e-68 263.1 320 45.3
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 4.0e-68 263.1 328 44.2
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 4.0e-68 263.1 328 44.8
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 4.0e-68 263.1 328 44.8
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 4.0e-68 263.1 328 43.6
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 5.3e-68 262.7 328 43.6
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 5.3e-68 262.7 339 43.7
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 5.3e-68 262.7 330 44.5
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 6.9e-68 262.3 328 44.5
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 6.9e-68 262.3 328 44.8
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 6.9e-68 262.3 329 43.8
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 9.0e-68 261.9 319 44.5
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 9.0e-68 261.9 319 44.5
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 9.0e-68 261.9 330 44.2
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 9.0e-68 261.9 328 44.2
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 1.2e-67 261.5 328 44.2
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-67 261.2 319 44.5
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-67 261.2 319 44.5
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 1.5e-67 261.2 319 44.5
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 1.5e-67 261.2 339 44.2
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 1.5e-67 261.2 320 44.4
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 2.0e-67 260.8 319 44.2
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 2.0e-67 260.8 319 44.2
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.6e-67 260.4 319 44.5
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 2.6e-67 260.4 328 43.9
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 4.5e-67 259.6 319 44.5
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 4.5e-67 259.6 325 44.9
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 4.5e-67 259.6 326 44.2
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 4.5e-67 259.6 328 45.1
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 5.8e-67 259.2 319 44.2
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 5.8e-67 259.2 328 44.2
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 5.8e-67 259.2 328 43.6
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 5.8e-67 259.2 319 44.2
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 5.8e-67 259.2 328 43.3
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 5.8e-67 259.2 339 43.4
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 5.8e-67 259.2 330 43.3
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 7.6e-67 258.8 328 43.9
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 7.6e-67 258.8 328 43.9
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 1.0e-66 258.5 319 44.2
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 1.0e-66 258.5 319 44.2
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 1.0e-66 258.5 331 44.4
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 1.3e-66 258.1 319 44.2
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 1.7e-66 257.7 312 46.2
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.7e-66 257.7 328 44.2
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 2.9e-66 256.9 320 44.7
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.9e-66 256.9 328 44.2
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 3.8e-66 256.5 328 43.6
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 3.8e-66 256.5 328 44.2
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 3.8e-66 256.5 328 44.2
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 6.5e-66 255.8 339 43.1
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 1.1e-65 255.0 243 53.1
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 1.9e-65 254.2 328 43.3
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 2.5e-65 253.8 243 52.7
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 5.5e-65 252.7 243 52.3
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 2.7e-64 250.4 337 42.1
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 1.3e-63 248.1 332 42.2
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 1.8e-63 247.7 329 43.8
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 3.9e-63 246.5 316 44.3
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 1.1e-62 245.0 243 51.9
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 1.9e-62 244.2 237 52.3
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 9.7e-62 241.9 357 40.3
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 2.2e-61 240.7 322 39.4
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 4.8e-61 239.6 381 38.8
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 4.8e-61 239.6 350 41.1
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 8.2e-61 238.8 331 41.1
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.1e-60 238.4 335 40.6
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 1.1e-60 238.4 345 40.6
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 3.1e-60 236.9 339 40.1
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 4.1e-60 236.5 332 41.0
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 5.3e-60 236.1 288 45.1
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 5.3e-60 236.1 327 41.0
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 2.6e-59 233.8 288 44.1
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 3.4e-59 233.4 299 43.5
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 1.9e-57 227.6 315 43.2
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 7.2e-57 225.7 319 41.1
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 6.3e-53 212.6 269 42.0
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 2.9e-34 150.6 212 42.5
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 4.7e-32 143.3 327 33.6
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 4.8e-29 133.3 144 47.9
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.1e-28 130.6 162 44.4
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.0e-26 125.6 168 42.3
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 4.2e-25 120.2 186 39.2
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 3.6e-24 117.1 124 50.8
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 8.8e-23 112.5 120 46.7
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 2.3e-15 87.8 89 48.3
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 9.2e-12 75.9 74 51.4
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 3.5e-11 73.9 65 55.4
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 9.5e-09 65.9 46 69.6
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 2.6e-06 57.8 73 43.8


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