Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0188s0012 Marchantia polymorpha HOM05D006645 ORTHO05D008129 1.2e-89 333.2 172 100.0
Pp3c20_8260 Physcomitrium patens HOM05D006645 ORTHO05D008129 7.4e-47 191.0 150 62.7
Migut.I00665 Erythranthe guttata HOM05D006645 ORTHO05D008129 1.1e-39 167.2 150 55.3
Thecc.03G141700 Theobroma cacao HOM05D006645 ORTHO05D008129 6.9e-37 157.9 145 54.5
MSTRG.22813 Avicennia marina HOM05D006645 ORTHO05D008129 1.5e-36 156.8 141 54.6
SMO116G0387 Selaginella moellendorffii HOM05D006645 ORTHO05D008129 3.4e-36 155.6 165 51.5
CSS0045487 Camellia sinensis var. sinensis HOM05D006645 ORTHO05D008129 7.6e-36 154.5 138 57.2
CSS0048618 Camellia sinensis var. sinensis HOM05D006645 ORTHO05D008129 7.6e-36 154.5 138 57.2
Duzib205G0637 Durio zibethinus HOM05D006645 ORTHO05D008129 1.0e-35 154.1 146 52.1
FvH4_5g09700 Fragaria vesca HOM05D006645 ORTHO05D008129 1.7e-35 153.3 146 52.1
MD06G1129100 Malus domestica HOM05D006645 ORTHO05D008129 1.7e-35 153.3 149 52.3
Dinv13711 Davidia involucrata HOM05D006645 ORTHO05D008129 2.2e-35 152.9 165 48.5
SalBow7G0306 Salvia bowleyana HOM05D006645 ORTHO05D008129 2.9e-35 152.5 137 54.0
AUR62043377 Chenopodium quinoa HOM05D006645 ORTHO05D008129 3.8e-35 152.1 136 57.4
Gohir.A12G194100 Gossypium hirsutum HOM05D006645 ORTHO05D008129 3.8e-35 152.1 163 48.5
MD14G1146000 Malus domestica HOM05D006645 ORTHO05D008129 4.9e-35 151.8 148 51.4
RcHm_v2.0_Chr7g0188541 Rosa chinensis HOM05D006645 ORTHO05D008129 4.9e-35 151.8 146 51.4
COL.COLO4_37268 Corchorus olitorius HOM05D006645 ORTHO05D008129 8.4e-35 151.0 146 52.7
EL10Ac5g11273 Beta vulgaris HOM05D006645 ORTHO05D008129 1.4e-34 150.2 138 55.8
Ciclev10032925m.g Citrus clementina HOM05D006645 ORTHO05D008129 1.4e-34 150.2 141 55.3
DCAR_016335 Daucus carota HOM05D006645 ORTHO05D008129 1.4e-34 150.2 145 53.1
Hma1.2p1_0452F.1_g155930 Hydrangea macrophylla HOM05D006645 ORTHO05D008129 1.4e-34 150.2 139 53.2
Hund10027 Selenicereus undatus HOM05D006645 ORTHO05D008129 1.4e-34 150.2 148 54.7
Atru.chr6.1936 Acer truncatum HOM05D006645 ORTHO05D008129 1.9e-34 149.8 155 50.3
Gohir.D12G196500 Gossypium hirsutum HOM05D006645 ORTHO05D008129 1.9e-34 149.8 163 47.9
Gorai.008G211100 Gossypium raimondii HOM05D006645 ORTHO05D008129 1.9e-34 149.8 163 48.5
Oeu013667.1 Olea europaea HOM05D006645 ORTHO05D008129 2.5e-34 149.4 137 55.5
Sc22g0003260 Simmondsia chinensis HOM05D006645 ORTHO05D008129 2.5e-34 149.4 153 50.3
AUR62032209 Chenopodium quinoa HOM05D006645 ORTHO05D008129 3.2e-34 149.1 136 55.9
Lsat_1_v5_gn_4_84301 Lactuca sativa HOM05D006645 ORTHO05D008129 3.2e-34 149.1 138 54.3
TWI14G0928 Tripterygium wilfordii HOM05D006645 ORTHO05D008129 3.2e-34 149.1 145 52.4
Duzib084G1311 Durio zibethinus HOM05D006645 ORTHO05D008129 7.1e-34 147.9 144 52.8
ECA232G4473 Erigeron canadensis HOM05D000001 ORTHO05D001247 7.1e-34 147.9 138 54.3
FAN13G1824 Fragaria x ananassa HOM05D006645 ORTHO05D008129 9.3e-34 147.5 146 51.4
Potri.015G108100 Populus trichocarpa HOM05D006645 ORTHO05D008129 9.3e-34 147.5 140 51.4
Sabra15G0130800 Salix brachista HOM05D006645 ORTHO05D008129 1.2e-33 147.1 140 51.4
CAN.G1008.52 Capsicum annuum HOM05D006645 ORTHO05D008129 1.6e-33 146.7 157 49.0
Sabra15G0128400 Salix brachista HOM05D006645 ORTHO05D008129 1.6e-33 146.7 140 51.4
TWI39G0437 Tripterygium wilfordii HOM05D006645 ORTHO05D008129 1.6e-33 146.7 144 52.1
PSO478G4148 Papaver somniferum HOM05D006645 ORTHO05D008129 2.1e-33 146.4 145 52.4
Prupe.5G140400 Prunus persica HOM05D006645 ORTHO05D008129 2.1e-33 146.4 150 50.7
Ah.11g046980 Amaranthus hybridus HOM05D006645 ORTHO05D008129 2.7e-33 146.0 138 55.8
TAR371G0070 Trochodendron aralioides HOM05D006645 ORTHO05D008129 2.7e-33 146.0 156 48.7
PGSC0003DMG400014238 Solanum tuberosum HOM05D006645 ORTHO05D008129 3.5e-33 145.6 159 47.2
Peaxi162Scf00314g00728 Petunia axillaris HOM05D006645 ORTHO05D008129 4.6e-33 145.2 140 51.4
Lalb_Chr08g0237591 Lupinus albus HOM05D006645 ORTHO05D008129 6.0e-33 144.8 138 55.8
Psat5g055480 Pisum sativum HOM05D006645 ORTHO05D008129 6.0e-33 144.8 132 56.8
Cpa.g.sc2215.2 Carica papaya HOM05D006645 ORTHO05D008129 7.9e-33 144.4 144 52.1
Cc04_g05780 Coffea canephora HOM05D006645 ORTHO05D008129 7.9e-33 144.4 147 51.7
ATR0582G272 Amborella trichopoda HOM05D006645 ORTHO05D008129 1.3e-32 143.7 162 48.1
CiPaw.12G000500 Carya illinoinensis HOM05D006645 ORTHO05D008129 1.3e-32 143.7 149 49.0
PSO017G3202 Papaver somniferum HOM05D006645 ORTHO05D008129 1.3e-32 143.7 163 47.9
Nn4g22122 Nelumbo nucifera HOM05D006645 ORTHO05D008129 2.3e-32 142.9 141 51.8
Aqoxy3G01868 Aquilegia oxysepala HOM05D006645 ORTHO05D008129 3.9e-32 142.1 139 51.8
Medtr3g098520 Medicago truncatula HOM05D006645 ORTHO05D008129 5.1e-32 141.7 139 53.2
Solyc03g118130.3 Solanum lycopersicum HOM05D006645 ORTHO05D008129 5.1e-32 141.7 140 50.0
AT5G51010 Arabidopsis thaliana HOM05D006645 ORTHO05D008129 8.7e-32 141.0 106 62.3
Phvul.002G280900 Phaseolus vulgaris HOM05D006645 ORTHO05D008129 8.7e-32 141.0 129 54.3
TAR622G0574 Trochodendron aralioides HOM05D006645 ORTHO05D008129 8.7e-32 141.0 158 44.3
Manes.06G127300 Manihot esculenta HOM05D006645 ORTHO05D008129 1.1e-31 140.6 149 49.0
vmacro19114 Vaccinium macrocarpon HOM05D006645 ORTHO05D008129 1.1e-31 140.6 143 51.0
vmacro19194 Vaccinium macrocarpon HOM05D006645 ORTHO05D008129 1.1e-31 140.6 143 51.0
CDE05G3351 Ceratophyllum demersum HOM05D006645 ORTHO05D008129 1.5e-31 140.2 139 50.4
CDE05G2456 Ceratophyllum demersum HOM05D006645 ORTHO05D008129 1.9e-31 139.8 139 50.4
Glyma.05G199700 Glycine max HOM05D006645 ORTHO05D008129 1.9e-31 139.8 129 54.3
arahy.Tifrunner.gnm1.ann1.1BW3L6 Arachis hypogaea HOM05D006645 ORTHO05D008129 2.5e-31 139.4 138 52.9
Glyma.08G007200 Glycine max HOM05D006645 ORTHO05D008129 2.5e-31 139.4 145 50.3
VMungo0251G1538 Vigna mungo HOM05D006645 ORTHO05D008129 2.5e-31 139.4 146 52.7
arahy.Tifrunner.gnm1.ann1.D72E2J Arachis hypogaea HOM05D006645 ORTHO05D008129 3.3e-31 139.0 166 47.0
Lj4g0018315 Lotus japonicus HOM05D006645 ORTHO05D008129 3.3e-31 139.0 138 51.4
Sopen03g037030 Solanum pennellii HOM05D006645 ORTHO05D008129 3.3e-31 139.0 140 48.6
Eucgr.K02190 Eucalyptus grandis HOM05D006645 ORTHO05D008129 4.3e-31 138.7 145 50.3
Glyma.04G202300 Glycine max HOM05D006645 ORTHO05D008129 4.3e-31 138.7 156 48.1
Haze_07089 Corylus avellana HOM05D006645 ORTHO05D008129 5.7e-31 138.3 186 43.0
PGR142G3652 Punica granatum HOM05D006645 ORTHO05D008129 5.7e-31 138.3 105 61.9
CARHR257180 Cardamine hirsuta HOM05D006645 ORTHO05D008129 7.4e-31 137.9 108 60.2
ClCG06G018300 Citrullus lanatus HOM05D006645 ORTHO05D008129 1.3e-30 137.1 176 44.9
BcaC01g06063 Brassica carinata HOM05D006645 ORTHO05D008129 1.6e-30 136.7 106 60.4
A03p16420 Brassica napus HOM05D006645 ORTHO05D008129 1.6e-30 136.7 106 60.4
C03p19310 Brassica napus HOM05D006645 ORTHO05D008129 1.6e-30 136.7 106 60.4
BolC3t14317H Brassica oleracea HOM05D006645 ORTHO05D008129 1.6e-30 136.7 106 60.4
BraA03t10932Z Brassica rapa HOM05D006645 ORTHO05D008129 1.6e-30 136.7 106 60.4
CsaV3_1G000140 Cucumis sativus L. HOM05D006645 ORTHO05D008129 1.6e-30 136.7 136 51.5
AL8G25220 Arabidopsis lyrata HOM05D006645 ORTHO05D008129 2.2e-30 136.3 108 58.3
Ca_10875_v3 Cicer arietinum L. HOM05D006645 ORTHO05D008129 2.2e-30 136.3 154 47.4
SGA_v2.0_scaffold37G14674 Striga asiatica HOM05D006645 ORTHO05D008129 2.2e-30 136.3 150 47.3
Nitab4.5_0000976g0110 Nicotiana tabacum HOM05D006645 ORTHO05D008129 2.8e-30 136.0 144 48.6
BcaC01g06113 Brassica carinata HOM05D006645 ORTHO05D008129 3.7e-30 135.6 103 61.2
Carub.0008s1101 Capsella rubella HOM05D006645 ORTHO05D008129 3.7e-30 135.6 108 58.3
Os11g0528500 Oryza sativa ssp. japonica HOM05D006645 ORTHO05D008129 3.7e-30 135.6 109 62.4
THA.LOC104811555 Tarenaya hassleriana HOM05D006645 ORTHO05D008129 3.7e-30 135.6 140 50.0
Zm00001eb113350 Zea mays HOM05D006645 ORTHO05D008129 3.7e-30 135.6 105 61.0
Thhalv10014834m.g Eutrema salsugineum HOM05D006645 ORTHO05D008129 4.8e-30 135.2 110 57.3
HanXRQChr09g0273781 Helianthus annuus HOM05D006645 ORTHO05D008129 1.8e-29 133.3 138 49.3
Rhsim08G0198600 Rhododendron simsii HOM05D006645 ORTHO05D008129 1.8e-29 133.3 108 60.2
Sp6g13160 Schrenkiella parvula HOM05D006645 ORTHO05D008129 3.1e-29 132.5 110 54.5
Phvul.009G160600 Phaseolus vulgaris HOM05D006645 ORTHO05D008129 5.3e-29 131.7 139 50.4
GSVIVG01008662001 Vitis vinifera HOM05D006645 ORTHO05D008129 6.9e-29 131.3 101 61.4
Actinidia18289 Actinidia chinensis HOM05D006645 ORTHO05D008129 9.0e-29 131.0 105 58.1
Lj1g0000604 Lotus japonicus HOM05D006645 ORTHO05D008129 2.6e-28 129.4 137 50.4
Nitab4.5_0010893g0030 Nicotiana tabacum HOM05D006645 ORTHO05D008129 3.4e-28 129.0 142 46.5
Dinv23234 Davidia involucrata HOM05D006645 ORTHO05D008129 1.0e-27 127.5 101 58.4
SEGI_04043 Sequoiadendron giganteum HOM05D006645 ORTHO05D008129 1.7e-27 126.7 150 48.7
arahy.Tifrunner.gnm1.ann1.FT61ID Arachis hypogaea HOM05D006645 ORTHO05D008129 3.8e-27 125.6 132 48.5
arahy.Tifrunner.gnm1.ann1.Z544U3 Arachis hypogaea HOM05D006645 ORTHO05D008129 3.8e-27 125.6 133 48.1
unitig_52.g17484 Utricularia gibba HOM05D006645 ORTHO05D008129 5.0e-27 125.2 126 48.4
Aa31LG3G7470 Aethionema arabicum HOM05D006645 ORTHO05D008129 1.1e-26 124.0 112 51.8
Lj5C86G18 Lonicera japonica HOM05D006645 ORTHO05D008129 4.2e-26 122.1 125 47.2
Sed0010334 Sechium edule HOM05D006645 ORTHO05D008129 1.6e-25 120.2 114 50.9
Lj9A488T61 Lonicera japonica HOM05D006645 ORTHO05D008129 2.5e-23 112.8 174 39.7
Actinidia25512 Actinidia chinensis HOM05D006645 ORTHO05D008129 1.7e-22 110.2 116 49.1
MELO3C026168.2 Cucumis melo HOM05D006645 ORTHO05D008129 3.7e-22 109.0 122 45.9
HPP92_024388 Vanilla planifolia HOM05D002498 ORTHO05D008129 5.9e-20 101.7 134 43.3
QL10p000304 Quercus lobata HOM05D006645 ORTHO05D008129 1.0e-16 90.9 262 27.1
MSTRG.26938 Avicennia marina HOM05D006062 ORTHO05D007613 1.0e-11 74.3 114 39.5
Actinidia18696 Actinidia chinensis HOM05D006062 ORTHO05D007613 6.5e-11 71.6 102 41.2
Actinidia28267 Actinidia chinensis HOM05D006062 ORTHO05D007613 3.2e-10 69.3 102 40.2
SGA_v2.0_scaffold18G08502 Striga asiatica HOM05D006062 ORTHO05D007613 9.4e-10 67.8 102 37.3
unitig_52.g17696 Utricularia gibba HOM05D006062 ORTHO05D007613 9.4e-10 67.8 86 37.2
Solyc03g096850.4 Solanum lycopersicum HOM05D006062 ORTHO05D007613 1.2e-09 67.4 102 37.3
Sopen03g027600 Solanum pennellii HOM05D006062 ORTHO05D007613 1.2e-09 67.4 102 37.3
PGSC0003DMG400000569 Solanum tuberosum HOM05D006062 ORTHO05D007613 1.2e-09 67.4 102 37.3
Migut.F00106 Erythranthe guttata HOM05D006062 ORTHO05D007613 2.1e-09 66.6 99 38.4
Glyma.17G183301 Glycine max HOM05D006645 ORTHO05D008129 3.6e-09 65.9 64 46.9
TPR.G37875 Trifolium pratense HOM05D006062 ORTHO05D007613 3.6e-09 65.9 101 40.6
TWI60G0061 Tripterygium wilfordii HOM05D006062 ORTHO05D007613 3.6e-09 65.9 102 36.3
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 6.1e-09 65.1 98 39.8
Medtr5g008050 Medicago truncatula HOM05D006062 ORTHO05D007613 6.1e-09 65.1 101 40.6
QL09p026245 Quercus lobata HOM05D006062 ORTHO05D007613 6.1e-09 65.1 102 36.3
CiPaw.06G020400 Carya illinoinensis HOM05D006062 ORTHO05D007613 8.0e-09 64.7 102 36.3
Hma1.2p1_0758F.1_g213560 Hydrangea macrophylla HOM05D006062 ORTHO05D007613 8.0e-09 64.7 102 36.3
Pp3c14_10490 Physcomitrium patens HOM05D006645 ORTHO05D008129 1.8e-08 63.5 63 46.0
Zm00001eb415470 Zea mays HOM05D006062 ORTHO05D007613 1.8e-08 63.5 110 35.5
MD07G1305400 Malus domestica HOM05D006062 ORTHO05D007613 2.3e-08 63.2 99 36.4
SalBow4G0173 Salvia bowleyana HOM05D006062 ORTHO05D007613 3.0e-08 62.8 90 37.8
Os08g0162600 Oryza sativa ssp. japonica HOM05D006062 ORTHO05D007613 3.9e-08 62.4 110 35.5
Pp3c2_6110 Physcomitrium patens HOM05D006645 ORTHO05D008129 5.2e-08 62.0 63 44.4
Pp3c10_15730 Physcomitrium patens HOM05D006062 ORTHO05D007613 6.7e-08 61.6 108 31.5
CDE02G0767 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 1.5e-07 60.5 101 30.7
Potri.012G109700 Populus trichocarpa HOM05D006645 ORTHO05D008129 1.5e-07 60.5 64 46.9
SMO165G0067 Selaginella moellendorffii HOM05D006645 ORTHO05D008129 1.5e-07 60.5 41 56.1
ECA233G2527 Erigeron canadensis HOM05D006062 ORTHO05D007613 2.0e-07 60.1 97 33.0
Ca_24458_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 2.6e-07 59.7 92 35.9
Ca_24464_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 2.6e-07 59.7 92 35.9
arahy.Tifrunner.gnm1.ann1.GUDI7G Arachis hypogaea HOM05D006062 ORTHO05D007613 3.3e-07 59.3 86 39.5
arahy.Tifrunner.gnm1.ann1.GZNV26 Arachis hypogaea HOM05D006062 ORTHO05D007613 3.3e-07 59.3 86 39.5
AagrBONN_evm.TU.Sc2ySwM_362.1750 Anthoceros agrestis HOM05D006645 ORTHO05D008129 4.4e-07 58.9 36 61.1
CAN.G303.70 Capsicum annuum HOM05D006062 ORTHO05D007613 5.7e-07 58.5 89 37.1
Cre12.g510400 Chlamydomonas reinhardtii HOM05D006062 ORTHO05D007613 5.7e-07 58.5 104 31.7
Aqoxy3G02060 Aquilegia oxysepala HOM05D006062 ORTHO05D007613 7.4e-07 58.2 99 35.4
CSS0001214 Camellia sinensis var. sinensis HOM05D006062 ORTHO05D007613 6.3e-06 55.1 121 33.9
Cre24.g755197 Chlamydomonas reinhardtii HOM05D006645 ORTHO05D008129 6.3e-06 55.1 103 35.9
EL10Ac3g05103 Beta vulgaris HOM05D006062 ORTHO05D007613 8.2e-06 54.7 106 32.1


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