Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 1.0e-277 959.5 511 100.0
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.3e-51 208.4 350 46.3
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 5.8e-47 193.0 420 42.1
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 3.3e-26 124.0 252 39.7
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 5.6e-26 123.2 203 46.8
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 9.5e-26 122.5 205 45.9
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 8.9e-24 115.9 229 42.4
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 2.0e-23 114.8 205 42.4
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 2.0e-23 114.8 208 43.3
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 4.4e-23 113.6 214 42.5
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 4.4e-23 113.6 214 42.5
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 4.4e-23 113.6 227 41.4
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 4.4e-23 113.6 203 44.3
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 5.8e-23 113.2 241 40.7
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 7.6e-23 112.8 290 37.6
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 1.3e-22 112.1 218 42.7
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 1.3e-22 112.1 205 41.0
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 1.7e-22 111.7 229 41.9
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.7e-22 111.7 229 41.9
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.7e-22 111.7 229 41.9
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 2.2e-22 111.3 243 38.7
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 2.2e-22 111.3 210 42.4
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.2e-22 111.3 272 38.6
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.2e-22 111.3 204 43.6
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 2.2e-22 111.3 200 40.5
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 2.2e-22 111.3 205 42.0
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 2.2e-22 111.3 203 42.9
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 2.2e-22 111.3 216 43.5
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.9e-22 110.9 211 42.7
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 3.8e-22 110.5 227 39.6
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.9e-22 110.2 215 41.9
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 4.9e-22 110.2 215 41.9
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 4.9e-22 110.2 218 43.1
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 4.9e-22 110.2 227 39.6
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 4.9e-22 110.2 227 39.6
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 6.4e-22 109.8 235 38.3
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 8.4e-22 109.4 240 40.8
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 8.4e-22 109.4 225 41.3
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 1.1e-21 109.0 203 42.4
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.4e-21 108.6 214 41.6
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 1.4e-21 108.6 210 41.4
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 1.4e-21 108.6 246 37.4
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 1.4e-21 108.6 230 41.7
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 1.9e-21 108.2 207 41.5
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 1.9e-21 108.2 202 44.6
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 1.9e-21 108.2 207 42.5
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 2.4e-21 107.8 217 41.0
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 4.2e-21 107.1 240 37.5
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 4.2e-21 107.1 219 41.1
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 5.4e-21 106.7 234 39.7
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 9.2e-21 105.9 252 38.1
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 9.2e-21 105.9 237 38.4
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 9.2e-21 105.9 264 39.0
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 1.2e-20 105.5 228 39.9
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 1.6e-20 105.1 228 39.0
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 2.1e-20 104.8 306 37.3
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 2.7e-20 104.4 218 39.4
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.7e-20 104.4 215 41.4
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 2.7e-20 104.4 227 38.3
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 2.7e-20 104.4 203 41.4
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 2.7e-20 104.4 227 38.8
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 3.5e-20 104.0 210 41.9
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 3.5e-20 104.0 270 35.9
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 3.5e-20 104.0 203 42.9
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 4.6e-20 103.6 238 39.1
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 4.6e-20 103.6 231 39.4
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 6.0e-20 103.2 220 40.9
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 6.0e-20 103.2 220 40.9
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 6.0e-20 103.2 220 40.9
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 7.8e-20 102.8 229 38.9
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.0e-19 102.4 237 39.7
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 1.3e-19 102.1 203 41.9
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 2.3e-19 101.3 210 40.5
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 3.0e-19 100.9 227 40.1
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 3.0e-19 100.9 212 41.0
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 3.0e-19 100.9 213 39.4
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 3.0e-19 100.9 210 41.0
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 3.9e-19 100.5 236 39.8
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 6.6e-19 99.8 230 39.6
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 8.7e-19 99.4 249 37.8
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 1.1e-18 99.0 203 40.9
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 1.1e-18 99.0 234 36.8
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 1.5e-18 98.6 211 38.4
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 1.5e-18 98.6 210 41.0
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 3.3e-18 97.4 209 39.2
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 7.3e-18 96.3 286 36.0
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 7.3e-18 96.3 206 38.3
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 7.3e-18 96.3 220 39.1
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 9.6e-18 95.9 205 41.5
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 1.6e-17 95.1 247 37.7
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 2.1e-17 94.7 247 37.7
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 2.1e-17 94.7 218 40.8
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 4.7e-17 93.6 223 38.1
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 1.1e-16 92.4 232 36.2
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 1.4e-16 92.0 244 36.5
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 2.4e-16 91.3 209 38.8
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 3.1e-16 90.9 286 32.9
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 4.0e-16 90.5 257 38.5
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.5e-15 88.6 208 38.5
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 4.4e-15 87.0 270 38.1
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 5.8e-15 86.7 258 34.1
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 1.7e-14 85.1 224 37.1
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 4.2e-13 80.5 256 35.5
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.6e-12 78.6 235 34.0
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 1.6e-12 78.6 178 40.4
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 2.1e-12 78.2 215 34.9
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 1.3e-11 75.5 207 38.6
CBR_g33995 Chara braunii HOM05D006128 ORTHO05D007466 8.7e-11 72.8 294 28.6
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 1.5e-10 72.0 286 31.5
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.6e-10 69.3 131 42.7
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 9.6e-10 69.3 178 38.8
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 9.6e-10 69.3 184 35.9
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 2.1e-09 68.2 121 44.6
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 2.1e-09 68.2 61 62.3
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 6.2e-09 66.6 349 27.5
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 9.0e-08 62.8 178 36.0
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 1.2e-07 62.4 56 57.1
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.5e-07 62.0 178 36.0
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.5e-07 62.0 194 35.1
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.6e-07 61.2 129 41.1
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 4.5e-07 60.5 173 38.7
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 2.2e-06 58.2 163 37.4
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 6.4e-06 56.6 49 57.1


User provided reference genes

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