Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 2.6e-136 488.8 259 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.2e-40 171.0 221 43.4
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.2e-40 171.0 228 44.7
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.6e-29 134.0 198 42.9
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 3.2e-22 109.8 187 37.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 5.5e-22 109.0 194 36.1
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.3e-20 103.6 194 34.5
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.8e-20 102.1 198 32.3
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.2e-19 101.3 194 34.0
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.5e-19 100.9 194 35.1
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.7e-19 99.0 199 30.7
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 7.5e-19 98.6 194 31.4
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.3e-18 97.8 194 32.0
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 1.3e-18 97.8 239 28.9
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.3e-18 97.8 194 32.5
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.7e-18 97.4 194 29.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 2.8e-18 96.7 194 30.9
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 3.7e-18 96.3 230 30.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 4.8e-18 95.9 194 32.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 6.3e-18 95.5 218 31.7
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 8.3e-18 95.1 245 28.6
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 8.3e-18 95.1 197 32.0
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.1e-17 94.7 234 29.5
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.4e-17 94.4 195 33.3
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.4e-17 94.4 194 32.5
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.8e-17 94.0 194 32.0
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.8e-17 94.0 195 32.3
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.8e-17 94.0 210 31.0
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.1e-17 93.2 221 30.8
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.1e-17 93.2 215 33.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 4.1e-17 92.8 199 30.7
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 5.4e-17 92.4 234 29.5
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 7.0e-17 92.0 224 28.6
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 9.1e-17 91.7 194 28.9
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 9.1e-17 91.7 198 30.8
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.2e-16 91.3 196 30.1
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.2e-16 91.3 195 32.8
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.2e-16 91.3 197 31.5
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.6e-16 90.9 197 28.9
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.6e-16 90.9 194 29.9
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.6e-16 90.9 194 30.9
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.6e-16 90.9 194 29.9
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.6e-16 90.9 194 29.9
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.6e-16 90.9 196 29.1
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 2.0e-16 90.5 198 30.3
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.7e-16 90.1 194 32.0
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.7e-16 90.1 198 32.3
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 3.5e-16 89.7 197 29.9
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 3.5e-16 89.7 220 26.8
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 4.5e-16 89.4 194 30.4
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 4.5e-16 89.4 194 30.4
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 5.9e-16 89.0 195 32.3
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 5.9e-16 89.0 231 28.6
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 5.9e-16 89.0 194 30.9
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 5.9e-16 89.0 196 30.1
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 5.9e-16 89.0 196 29.1
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 7.7e-16 88.6 194 30.4
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 7.7e-16 88.6 194 30.4
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 7.7e-16 88.6 194 29.4
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 7.7e-16 88.6 194 32.0
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.0e-15 88.2 203 29.6
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.0e-15 88.2 194 30.9
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 1.3e-15 87.8 186 30.6
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 1.7e-15 87.4 198 29.3
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 2.3e-15 87.0 196 28.6
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 2.9e-15 86.7 196 30.6
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 2.9e-15 86.7 194 29.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.8e-15 86.3 198 29.8
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 5.0e-15 85.9 198 31.3
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 5.0e-15 85.9 199 28.1
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 6.6e-15 85.5 194 28.4
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 6.6e-15 85.5 195 29.7
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 8.6e-15 85.1 232 28.9
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 8.6e-15 85.1 221 29.0
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 8.6e-15 85.1 194 27.8
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 8.6e-15 85.1 197 28.4
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 8.6e-15 85.1 196 31.6
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.1e-14 84.7 180 31.7
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.1e-14 84.7 194 28.9
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.5e-14 84.3 215 30.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.5e-14 84.3 199 27.6
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.5e-14 84.3 194 29.4
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.9e-14 84.0 215 29.8
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.9e-14 84.0 222 27.5
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.9e-14 84.0 193 28.5
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.5e-14 83.6 195 29.7
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 3.3e-14 83.2 229 30.1
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 5.5e-14 82.4 196 30.1
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 5.5e-14 82.4 231 29.0
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 7.2e-14 82.0 193 31.1
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.2e-13 81.3 192 28.6
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.2e-13 81.3 194 30.4
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.6e-13 80.9 198 30.3
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 2.1e-13 80.5 190 26.8
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.1e-13 80.5 200 29.5
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 2.1e-13 80.5 216 28.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 2.1e-13 80.5 198 30.3
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 2.8e-13 80.1 201 27.4
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.0e-13 78.6 198 28.8
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.0e-12 78.2 191 27.7
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 6.8e-12 75.5 180 27.8
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.2e-11 74.7 180 28.3
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 2.0e-11 73.9 177 27.1
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 3.4e-11 73.2 177 27.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 5.7e-11 72.4 177 27.1
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.7e-10 70.9 179 27.4
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.2e-10 70.5 220 26.4
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 3.7e-10 69.7 212 25.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 3.2e-09 66.6 180 25.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.7e-07 60.8 187 27.8
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 3.9e-07 59.7 189 24.3
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 6.6e-07 58.9 92 32.6


User provided reference genes

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