Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 1.2e-115 419.9 206 100.0
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 7.9e-56 221.1 192 56.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.2e-53 213.0 186 55.4
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 8.2e-53 211.1 179 55.9
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.1e-52 210.7 182 56.6
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 2.4e-52 209.5 182 56.6
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 5.3e-52 208.4 182 55.5
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 7.0e-52 208.0 187 54.0
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 9.1e-52 207.6 186 54.3
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.2e-51 207.2 182 57.1
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.2e-51 207.2 187 55.1
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.6e-51 206.8 186 54.8
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.6e-51 206.8 182 57.1
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 2.0e-51 206.5 191 53.9
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 3.5e-51 205.7 182 56.6
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 3.5e-51 205.7 187 53.5
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 4.5e-51 205.3 187 55.1
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.3e-50 203.8 182 56.6
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.7e-50 203.4 186 55.4
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 2.9e-50 202.6 189 52.9
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 3.8e-50 202.2 176 56.8
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 3.8e-50 202.2 187 52.9
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 5.0e-50 201.8 182 54.9
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 6.5e-50 201.4 196 53.6
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 6.5e-50 201.4 187 51.9
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 6.5e-50 201.4 182 55.5
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 1.9e-49 199.9 188 54.3
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 1.9e-49 199.9 176 55.1
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.9e-49 199.9 182 56.6
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.9e-49 199.9 187 53.5
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 2.5e-49 199.5 192 51.6
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 3.2e-49 199.1 187 51.9
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 3.2e-49 199.1 182 55.5
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 5.5e-49 198.4 180 53.3
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 5.5e-49 198.4 200 51.5
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.2e-48 197.2 187 49.7
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 1.2e-48 197.2 182 54.9
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 2.1e-48 196.4 187 52.9
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 2.7e-48 196.1 188 51.6
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 4.7e-48 195.3 187 52.4
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 6.1e-48 194.9 187 51.9
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 6.1e-48 194.9 191 50.8
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 1.4e-47 193.7 188 52.7
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 1.8e-47 193.4 188 51.6
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 3.0e-47 192.6 187 51.9
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 4.0e-47 192.2 182 53.3
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 4.0e-47 192.2 183 54.1
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 5.2e-47 191.8 175 54.9
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 6.7e-47 191.4 187 49.7
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 8.8e-47 191.0 182 55.5
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 1.2e-46 190.7 187 49.7
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.2e-46 190.7 182 52.7
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 1.2e-46 190.7 187 50.3
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.5e-46 190.3 188 50.5
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 2.0e-46 189.9 188 50.5
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 2.0e-46 189.9 186 50.0
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 3.3e-46 189.1 187 51.9
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 4.4e-46 188.7 182 52.7
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 7.5e-46 188.0 188 50.0
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 9.7e-46 187.6 188 52.7
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 3.7e-45 185.7 182 52.2
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.7e-45 185.7 180 50.6
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 3.7e-45 185.7 186 49.5
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 6.3e-45 184.9 189 50.8
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 1.1e-44 184.1 194 47.9
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.1e-44 184.1 188 50.5
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 1.4e-44 183.7 182 52.2
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 1.8e-44 183.3 189 49.7
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 3.1e-44 182.6 176 50.6
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 3.1e-44 182.6 189 48.7
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 3.1e-44 182.6 182 50.0
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 3.1e-44 182.6 182 50.0
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 4.1e-44 182.2 189 49.7
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 4.1e-44 182.2 189 49.7
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 4.1e-44 182.2 189 49.7
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 5.3e-44 181.8 189 49.7
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 5.3e-44 181.8 189 49.2
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 9.1e-44 181.0 182 49.5
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 2.0e-43 179.9 159 56.6
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 2.7e-43 179.5 197 47.2
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 3.5e-43 179.1 182 49.5
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 4.5e-43 178.7 181 50.3
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 7.7e-43 177.9 159 56.0
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.7e-42 176.8 185 49.2
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 6.5e-42 174.9 194 47.9
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 6.5e-42 174.9 182 53.3
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 9.4e-41 171.0 193 47.7
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 2.1e-40 169.9 187 50.3
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 3.6e-40 169.1 191 49.2
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.0e-39 166.0 173 49.7
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.0e-39 166.0 160 55.6
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 5.9e-35 151.8 147 52.4
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 5.0e-34 148.7 185 43.8
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.3e-33 146.0 158 48.1
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 5.2e-31 138.7 186 40.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 1.2e-27 127.5 85 68.2
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 3.0e-23 112.8 82 64.6
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 4.9e-21 105.5 71 70.4
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 6.4e-21 105.1 116 45.7
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 4.6e-19 99.0 71 64.8
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 2.3e-18 96.7 81 56.8
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.1e-15 87.8 95 49.5
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 6.4e-13 78.6 154 34.4
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 7.0e-12 75.1 56 57.1
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 4.7e-08 62.4 152 30.9
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 2.3e-07 60.1 74 41.9
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 2.3e-07 60.1 74 41.9
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 8.9e-07 58.2 173 28.3
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.5e-06 57.4 183 26.2
Cfa021425 Carpinus fangiana HOM05D006499 ORTHO05D007874 2.6e-06 56.6 116 32.8
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 4.4e-06 55.8 177 26.6
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 5.8e-06 55.5 183 29.0
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 5.8e-06 55.5 177 26.0
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 7.5e-06 55.1 174 28.2
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 9.9e-06 54.7 83 37.3
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 9.9e-06 54.7 179 27.9
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 9.9e-06 54.7 179 27.9


User provided reference genes

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