Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 3.1e-187 658.3 332 100.0
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 3.2e-91 339.3 328 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 3.0e-89 332.8 292 62.3
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 4.1e-86 322.4 313 53.7
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 4.5e-85 318.9 315 53.7
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 5.9e-85 318.5 315 54.9
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 7.7e-85 318.2 322 52.8
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.3e-84 317.4 314 51.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.7e-84 317.0 321 54.2
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 5.0e-84 315.5 315 51.4
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 8.5e-84 314.7 315 51.7
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 8.5e-84 314.7 317 56.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.1e-83 314.3 317 52.7
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.5e-83 313.9 316 54.1
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.9e-83 313.5 320 52.8
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.5e-83 312.0 327 51.7
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 5.5e-83 312.0 316 53.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.5e-83 312.0 316 52.2
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 7.2e-83 311.6 327 52.3
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 9.4e-83 311.2 319 53.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.2e-82 310.8 315 52.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.2e-82 310.8 322 52.8
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.2e-82 310.8 328 51.5
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.2e-82 310.8 318 53.5
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.2e-82 310.8 315 51.4
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.6e-82 310.5 318 52.8
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.6e-82 310.5 315 51.4
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.6e-82 310.5 317 53.6
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 1.6e-82 310.5 317 52.4
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.6e-82 310.5 319 52.7
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.1e-82 310.1 317 53.6
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.1e-82 310.1 317 53.3
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 2.7e-82 309.7 315 51.4
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 2.7e-82 309.7 320 52.8
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.7e-82 309.7 320 52.5
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.6e-82 309.3 327 51.7
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 3.6e-82 309.3 322 52.8
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 3.6e-82 309.3 317 52.4
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 3.6e-82 309.3 317 52.1
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 6.1e-82 308.5 322 51.6
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 1.0e-81 307.8 315 51.1
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.4e-81 307.4 315 51.7
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.4e-81 307.4 316 54.1
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.3e-81 306.6 327 50.8
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 3.0e-81 306.2 317 52.7
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.0e-81 306.2 322 52.2
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-81 306.2 317 53.0
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 4.0e-81 305.8 317 52.1
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.0e-81 305.8 317 52.7
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 6.7e-81 305.1 317 52.7
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 6.7e-81 305.1 317 52.4
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 6.7e-81 305.1 320 53.4
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 8.8e-81 304.7 320 52.5
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.2e-80 304.3 326 50.6
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.2e-80 304.3 317 52.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.2e-80 304.3 315 52.1
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.5e-80 303.9 316 53.5
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 2.0e-80 303.5 331 52.6
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.6e-80 303.1 317 52.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.6e-80 303.1 319 52.0
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 2.6e-80 303.1 325 52.3
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 3.3e-80 302.8 317 52.1
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 5.7e-80 302.0 317 51.1
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 7.5e-80 301.6 321 52.3
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.3e-79 300.8 319 52.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.7e-79 300.4 319 51.7
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 2.2e-79 300.1 325 50.5
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 2.8e-79 299.7 332 51.8
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 3.7e-79 299.3 317 50.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.8e-79 298.9 329 51.1
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 6.3e-79 298.5 322 51.6
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 8.2e-79 298.1 315 49.5
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 5.3e-78 295.4 308 52.6
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 7.0e-78 295.0 317 51.7
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.6e-77 293.9 309 52.1
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 7.7e-77 291.6 326 50.0
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.2e-76 290.0 331 49.5
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.5e-75 286.6 330 50.0
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 9.4e-75 284.6 328 49.1
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.1e-74 283.5 322 49.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.8e-73 278.5 307 51.5
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.7e-72 275.4 276 54.0
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 9.8e-72 274.6 275 54.5
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.8e-70 270.4 317 47.9
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.7e-68 263.8 325 46.8
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.7e-68 263.8 326 46.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.1e-67 261.2 314 47.5
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 3.3e-67 259.6 323 47.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 4.2e-67 259.2 271 53.5
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 4.9e-63 245.7 369 41.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 3.1e-62 243.0 379 40.9
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.3e-60 237.7 318 45.9
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 6.6e-60 235.3 355 42.0
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 4.7e-58 229.2 323 42.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.4e-57 227.6 354 42.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 5.8e-56 222.2 348 40.8
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 9.8e-56 221.5 317 43.8
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.1e-49 201.4 203 53.2
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.5e-48 197.6 229 48.0
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 3.7e-47 193.0 180 56.7
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.5e-32 144.4 113 57.5
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.0e-28 131.7 276 35.9
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.0e-28 130.2 185 43.2
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.9e-27 127.5 165 44.2
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.7e-23 114.4 96 57.3
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.9e-23 112.8 110 54.5
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 8.7e-20 102.1 228 34.6
TPR.G10324 Trifolium pratense HOM05D001947 ORTHO05D002440 9.3e-06 55.5 171 25.1


User provided reference genes

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