Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 0.0e+00 1158.7 578 100.0
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 9.0e-198 694.1 499 68.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.0e-185 652.5 455 68.4
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 3.7e-183 645.6 451 66.3
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 1.3e-180 637.1 449 65.7
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.9e-179 633.3 443 64.8
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 7.2e-179 631.3 465 62.6
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.1e-178 629.8 461 64.2
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.7e-178 629.4 443 65.0
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 6.7e-177 624.8 444 66.0
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 8.7e-177 624.4 450 63.8
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 2.5e-176 622.9 444 64.9
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.3e-176 622.5 478 61.3
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 9.7e-176 620.9 465 61.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 1.3e-175 620.5 486 60.7
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 3.7e-175 619.0 475 62.5
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 4.8e-175 618.6 451 63.9
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 6.3e-175 618.2 477 61.4
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 8.2e-175 617.8 475 62.3
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.1e-174 617.5 500 60.4
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.4e-174 617.1 462 63.4
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.4e-174 617.1 477 61.4
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.8e-174 616.7 443 63.9
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 2.4e-174 616.3 460 63.3
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 3.1e-174 615.9 483 61.5
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 3.1e-174 615.9 485 61.2
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 4.1e-174 615.5 475 62.3
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 5.3e-174 615.1 442 64.9
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 6.9e-174 614.8 461 61.4
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 6.9e-174 614.8 451 63.4
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 6.9e-174 614.8 444 65.1
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 6.9e-174 614.8 442 64.0
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 9.1e-174 614.4 477 61.4
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.2e-173 614.0 444 64.6
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.2e-173 614.0 444 63.5
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 1.2e-173 614.0 451 63.4
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.5e-173 613.6 446 63.9
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.5e-173 613.6 444 64.6
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.5e-173 613.6 444 63.1
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.5e-173 613.6 459 63.6
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.0e-173 613.2 477 61.2
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 2.0e-173 613.2 444 63.7
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 2.6e-173 612.8 468 62.6
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 3.4e-173 612.5 475 61.3
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.5e-173 612.1 444 64.6
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 5.9e-173 611.7 475 61.7
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 5.9e-173 611.7 484 59.9
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 7.7e-173 611.3 451 62.5
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 7.7e-173 611.3 454 63.2
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 7.7e-173 611.3 479 60.1
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.0e-172 610.9 451 63.2
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.3e-172 610.5 451 63.9
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.2e-172 609.8 462 62.3
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 2.9e-172 609.4 456 63.2
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 5.0e-172 608.6 447 66.0
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 5.0e-172 608.6 511 58.9
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 5.0e-172 608.6 451 62.5
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 6.5e-172 608.2 451 62.3
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.1e-171 607.4 451 62.7
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.1e-171 607.4 443 63.4
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.1e-171 607.4 445 62.9
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.4e-171 607.1 468 62.0
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.9e-171 606.7 441 64.2
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.9e-171 606.7 459 62.3
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 2.5e-171 606.3 442 63.6
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 4.2e-171 605.5 483 59.6
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.2e-171 604.7 444 63.5
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 7.2e-171 604.7 483 60.5
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 1.2e-170 604.0 447 63.3
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.1e-170 603.2 444 64.4
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 6.1e-170 601.7 447 64.0
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 6.1e-170 601.7 444 62.4
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.4e-169 600.5 454 61.9
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 3.0e-169 599.4 491 59.1
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 3.9e-169 599.0 485 59.0
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.5e-168 597.0 468 60.5
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 2.0e-168 596.7 449 61.9
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 9.7e-168 594.3 491 59.7
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 1.3e-167 594.0 491 59.7
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.7e-167 593.6 444 61.3
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 2.2e-167 593.2 455 60.9
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.8e-167 592.8 473 60.0
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 2.8e-167 592.8 487 57.9
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.4e-166 590.5 454 61.7
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.1e-166 589.3 471 60.1
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.5e-165 587.0 445 61.6
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.0e-164 584.3 473 59.6
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 1.0e-164 584.3 500 57.6
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 5.0e-164 582.0 478 57.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 4.2e-163 578.9 430 62.8
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.1e-162 575.1 444 61.5
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 3.3e-160 569.3 479 57.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.7e-156 557.0 416 63.9
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 2.7e-154 549.7 477 56.0
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 3.6e-154 549.3 448 57.8
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.2e-147 526.2 470 55.1
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.6e-144 516.5 479 54.5
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.2e-139 499.6 477 52.4
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.8e-137 493.8 361 63.2
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 1.3e-135 487.6 440 54.3
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.8e-135 486.5 450 54.0
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 8.6e-132 474.9 350 64.0
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 4.7e-130 469.2 344 64.0
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 8.0e-130 468.4 475 51.6
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.4e-110 404.4 472 48.9
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.6e-106 391.0 477 46.1
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 3.1e-105 386.7 309 60.2
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.0e-100 371.7 475 44.0
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 7.3e-99 365.5 256 67.2
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 7.6e-96 355.5 255 64.7
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.1e-81 308.5 455 41.1
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 5.5e-46 189.9 226 46.0
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.9e-31 141.0 95 63.2
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 5.0e-31 140.2 281 36.7
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 4.7e-29 133.7 95 64.2
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 4.7e-29 133.7 95 64.2
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 4.7e-29 133.7 95 64.2
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 4.7e-29 133.7 95 64.2
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 3.7e-18 97.4 79 60.8
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 3.3e-14 84.3 59 67.8
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 4.3e-06 57.4 51 51.0


User provided reference genes

Program Settings