Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.4e-176 622.1 319 100.0
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 6.8e-171 604.0 311 99.7
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 2.9e-97 359.4 309 61.5
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 4.8e-92 342.0 324 59.6
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 6.2e-92 341.7 332 56.9
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.1e-91 340.9 323 55.1
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 1.2e-90 337.4 313 56.9
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 5.8e-90 335.1 322 55.9
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 7.6e-90 334.7 316 56.0
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.3e-89 334.0 316 55.7
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.7e-89 333.6 315 57.1
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.8e-89 332.4 316 55.7
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 5.0e-89 332.0 308 55.5
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 5.0e-89 332.0 313 55.6
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 1.1e-88 330.9 311 55.9
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.4e-88 330.5 316 55.4
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 1.9e-88 330.1 317 54.6
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 2.5e-88 329.7 315 56.5
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 2.5e-88 329.7 315 55.2
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 2.5e-88 329.7 315 55.9
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 3.2e-88 329.3 314 55.7
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.2e-88 328.9 316 54.1
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 5.5e-88 328.6 314 56.1
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 5.5e-88 328.6 314 56.1
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 5.5e-88 328.6 319 56.1
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 7.2e-88 328.2 314 56.4
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 9.3e-88 327.8 314 56.1
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.2e-87 327.4 314 55.4
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.1e-87 326.6 315 55.2
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 2.1e-87 326.6 315 55.6
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 2.7e-87 326.2 315 55.2
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 2.7e-87 326.2 314 55.7
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 3.5e-87 325.9 314 55.7
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 4.6e-87 325.5 314 55.7
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 6.1e-87 325.1 321 55.8
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 6.1e-87 325.1 313 54.3
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.8e-86 323.6 320 52.8
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 2.3e-86 323.2 314 55.1
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 3.9e-86 322.4 316 55.1
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 6.7e-86 321.6 313 55.6
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 8.7e-86 321.2 325 53.5
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.1e-85 320.9 318 55.0
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 1.5e-85 320.5 322 55.3
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.5e-85 319.7 326 53.7
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 3.3e-85 319.3 325 53.2
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 3.3e-85 319.3 315 54.6
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 4.3e-85 318.9 320 54.1
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.3e-85 318.9 319 54.9
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 4.3e-85 318.9 322 53.1
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 5.7e-85 318.5 318 55.3
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.7e-85 318.5 319 54.5
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 5.7e-85 318.5 314 54.1
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 7.4e-85 318.2 314 54.1
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 9.7e-85 317.8 326 54.3
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 9.7e-85 317.8 319 54.5
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 9.7e-85 317.8 325 53.2
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.3e-84 317.4 326 53.7
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 2.2e-84 316.6 320 53.4
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 2.2e-84 316.6 339 52.2
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 2.2e-84 316.6 313 54.3
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 2.2e-84 316.6 321 52.6
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 2.8e-84 316.2 315 54.3
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 2.8e-84 316.2 316 53.5
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 3.7e-84 315.8 327 52.6
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.7e-84 315.8 317 53.6
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 6.3e-84 315.1 317 53.0
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 6.3e-84 315.1 316 53.2
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 8.2e-84 314.7 317 53.9
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.1e-83 314.3 322 54.7
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 1.4e-83 313.9 305 56.4
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.4e-83 313.9 318 52.5
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.4e-83 313.2 320 53.8
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 2.4e-83 313.2 319 55.2
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 5.3e-83 312.0 317 55.2
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 9.0e-83 311.2 320 55.0
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 3.4e-82 309.3 326 51.2
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 4.5e-82 308.9 322 51.6
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 4.5e-82 308.9 319 53.3
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 2.2e-81 306.6 324 52.2
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.2e-81 306.6 326 52.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 5.0e-81 305.4 319 51.4
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 1.4e-80 303.9 314 53.5
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 5.5e-80 302.0 317 52.7
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.2e-79 300.8 316 51.3
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 2.7e-79 299.7 314 51.3
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 4.6e-79 298.9 318 52.2
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 6.1e-79 298.5 320 51.2
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.4e-78 297.4 310 54.2
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.4e-78 297.4 310 54.2
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 1.8e-78 297.0 318 51.3
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.1e-78 295.4 302 53.3
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.1e-78 295.4 277 54.9
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 6.7e-78 295.0 307 54.1
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 7.4e-77 291.6 308 52.9
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 9.7e-77 291.2 310 52.9
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 2.8e-76 289.7 310 52.3
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 4.8e-76 288.9 311 54.3
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 6.3e-76 288.5 317 50.2
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 3.1e-75 286.2 307 52.4
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 3.1e-75 286.2 310 52.3
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 4.1e-75 285.8 386 44.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.2e-74 284.3 310 52.3
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.2e-74 284.3 310 53.5
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.6e-74 283.1 291 53.3
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 2.5e-72 276.6 317 48.6
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 9.4e-72 274.6 322 51.6
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 6.7e-70 268.5 313 49.5
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.5e-69 267.3 329 49.8
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 8.2e-68 261.5 247 55.9
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 4.4e-61 239.2 303 46.5
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.1e-59 234.6 294 44.6
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 2.4e-59 233.4 342 43.0
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.5e-58 229.6 314 43.3
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 3.8e-57 226.1 331 43.2
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 2.3e-41 173.7 321 38.6
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 9.8e-37 158.3 215 46.5
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.8e-35 154.1 171 46.2
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.4e-29 133.3 110 61.8
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.3e-28 131.3 320 35.0
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.9e-28 130.2 121 54.5
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.4e-27 127.1 144 49.3
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.3e-25 120.6 116 55.2
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.3e-25 120.6 116 55.2
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.8e-22 110.9 365 29.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 7.8e-18 95.5 210 38.1
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 3.1e-14 83.6 63 58.7
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 2.3e-09 67.4 103 39.8
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 1.2e-07 61.6 307 26.7


User provided reference genes

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