Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 3.4e-89 331.6 166 100.0
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 5.6e-36 154.8 88 88.6
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 6.9e-26 121.3 87 65.5
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 6.9e-26 121.3 85 69.4
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 9.0e-26 120.9 87 67.8
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 1.5e-25 120.2 108 57.4
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 2.6e-25 119.4 105 58.1
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 3.4e-25 119.0 87 63.2
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 3.4e-25 119.0 87 63.2
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 3.4e-25 119.0 87 63.2
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 4.5e-25 118.6 85 68.2
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 7.6e-25 117.9 88 63.6
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 1.0e-24 117.5 85 64.7
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.0e-24 117.5 87 63.2
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 1.3e-24 117.1 85 65.9
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 1.3e-24 117.1 85 65.9
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 1.3e-24 117.1 87 60.9
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 1.3e-24 117.1 87 63.2
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 1.7e-24 116.7 88 62.5
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 1.7e-24 116.7 87 60.9
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 2.2e-24 116.3 87 63.2
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 2.2e-24 116.3 87 63.2
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 2.2e-24 116.3 87 62.1
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 2.2e-24 116.3 88 62.5
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 2.9e-24 115.9 87 62.1
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 2.9e-24 115.9 87 62.1
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 3.8e-24 115.5 87 62.1
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 3.8e-24 115.5 84 65.5
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 3.8e-24 115.5 84 63.1
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 3.8e-24 115.5 87 62.1
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 5.0e-24 115.2 84 65.5
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 5.0e-24 115.2 84 65.5
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 5.0e-24 115.2 87 62.1
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 5.0e-24 115.2 84 65.5
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 5.0e-24 115.2 87 62.1
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 6.5e-24 114.8 87 60.9
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 6.5e-24 114.8 87 62.1
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 6.5e-24 114.8 87 62.1
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 8.4e-24 114.4 108 54.6
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 8.4e-24 114.4 87 60.9
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 8.4e-24 114.4 87 62.1
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 8.4e-24 114.4 108 54.6
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.1e-23 114.0 108 54.6
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 1.1e-23 114.0 87 62.1
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 1.1e-23 114.0 87 62.1
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 1.1e-23 114.0 87 65.5
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 1.1e-23 114.0 87 62.1
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 62.1
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.4e-23 113.6 84 64.3
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 59.8
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 60.9
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 60.9
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 60.9
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 1.4e-23 113.6 88 61.4
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 60.9
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 1.4e-23 113.6 87 60.9
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.9e-23 113.2 87 62.1
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 1.9e-23 113.2 87 62.1
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 2.5e-23 112.8 87 60.9
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 3.2e-23 112.5 108 52.8
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 3.2e-23 112.5 87 60.9
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 3.2e-23 112.5 87 59.8
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 3.2e-23 112.5 87 59.8
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 3.2e-23 112.5 87 59.8
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 3.2e-23 112.5 87 59.8
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 4.2e-23 112.1 84 61.9
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 7.1e-23 111.3 87 64.4
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 7.1e-23 111.3 88 59.1
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 7.1e-23 111.3 87 59.8
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 7.1e-23 111.3 87 60.9
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 9.3e-23 110.9 87 58.6
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 9.3e-23 110.9 87 58.6
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.2e-22 110.5 84 64.3
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.2e-22 110.5 87 59.8
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.2e-22 110.5 87 59.8
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 1.6e-22 110.2 84 61.9
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 2.1e-22 109.8 87 59.8
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 2.1e-22 109.8 87 59.8
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 2.1e-22 109.8 87 58.6
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 2.1e-22 109.8 87 59.8
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 2.1e-22 109.8 87 59.8
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.7e-22 109.4 87 58.6
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 2.7e-22 109.4 87 58.6
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 2.7e-22 109.4 87 58.6
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 2.7e-22 109.4 87 58.6
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 4.6e-22 108.6 87 58.6
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 4.6e-22 108.6 87 58.6
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 4.6e-22 108.6 87 58.6
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 4.6e-22 108.6 87 58.6
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 4.6e-22 108.6 87 57.5
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 4.6e-22 108.6 85 60.0
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 6.1e-22 108.2 84 60.7
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 7.9e-22 107.8 87 57.5
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 7.9e-22 107.8 108 52.8
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 7.9e-22 107.8 84 59.5
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 1.0e-21 107.5 87 58.6
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.3e-21 107.1 84 60.7
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 1.3e-21 107.1 141 44.0
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 1.8e-21 106.7 84 60.7
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 1.8e-21 106.7 87 57.5
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 1.8e-21 106.7 87 56.3
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 3.0e-21 105.9 87 58.6
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 5.1e-21 105.1 82 61.0
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 6.7e-21 104.8 95 54.7
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 8.7e-21 104.4 84 57.1
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 1.1e-20 104.0 87 57.5
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.9e-20 103.2 88 59.1
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 2.5e-20 102.8 87 57.5
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 3.7e-19 99.0 71 60.6
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 1.1e-18 97.4 68 63.2
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.2e-17 94.0 76 60.5
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 5.9e-17 91.7 70 61.4
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 3.8e-16 89.0 79 57.0
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 3.2e-15 85.9 89 46.1
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 4.2e-15 85.5 75 54.7
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 1.5e-12 77.0 88 48.9
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 2.0e-12 76.6 87 49.4
BraA02t05478Z Brassica rapa HOM05D004860 ORTHO05D006366 1.4e-10 70.5 78 48.7
A02p05180 Brassica napus HOM05D004860 ORTHO05D006366 1.8e-10 70.1 77 48.1
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 2.6e-09 66.2 68 50.0
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 1.6e-06 57.0 37 67.6
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 6.1e-06 55.1 103 40.8


User provided reference genes

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