Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 0.0e+00 1149.8 592 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 1.9e-78 297.7 466 40.1
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 1.6e-77 294.7 574 37.6
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 3.4e-59 233.8 381 36.5
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 2.4e-57 227.6 393 34.9
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 9.3e-57 225.7 452 33.8
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 2.7e-56 224.2 466 34.1
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 3.9e-55 220.3 398 34.4
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 6.6e-55 219.5 450 34.9
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.1e-54 218.8 470 32.8
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 1.5e-54 218.4 532 32.0
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.5e-54 218.4 450 33.8
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 1.9e-54 218.0 458 34.7
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 2.5e-54 217.6 450 33.6
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 2.5e-54 217.6 454 32.6
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 3.3e-54 217.2 454 33.0
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 3.3e-54 217.2 473 35.5
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 4.3e-54 216.9 380 35.5
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.3e-54 216.9 457 33.5
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 7.3e-54 216.1 454 32.6
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.6e-53 214.9 478 34.5
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 3.6e-53 213.8 382 34.8
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 4.8e-53 213.4 454 32.2
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 4.8e-53 213.4 487 31.6
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 8.1e-53 212.6 470 32.3
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.4e-52 211.8 545 30.6
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 2.4e-52 211.1 459 32.9
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 3.1e-52 210.7 450 32.4
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 4.0e-52 210.3 448 32.4
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 5.3e-52 209.9 452 33.0
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 9.0e-52 209.1 451 31.0
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 9.0e-52 209.1 472 31.1
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.2e-51 208.8 513 31.6
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 1.2e-51 208.8 455 32.3
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 2.0e-51 208.0 352 36.1
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 2.6e-51 207.6 449 31.6
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.6e-51 207.6 457 33.5
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 2.6e-51 207.6 485 31.5
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 3.4e-51 207.2 467 30.4
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 7.6e-51 206.1 454 31.7
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.3e-50 205.3 457 33.9
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 2.9e-50 204.1 499 30.1
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.9e-50 204.1 472 30.1
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 3.8e-50 203.8 457 33.7
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 3.8e-50 203.8 493 32.0
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 4.9e-50 203.4 457 32.6
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 6.4e-50 203.0 456 31.4
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 6.4e-50 203.0 453 31.8
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.1e-49 202.2 453 31.8
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.1e-49 202.2 448 33.0
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.4e-49 201.8 468 32.1
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.9e-49 201.4 470 30.2
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 4.2e-49 200.3 488 30.5
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 7.1e-49 199.5 457 32.6
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 1.2e-48 198.7 543 29.5
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 6.0e-48 196.4 467 31.3
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 7.9e-48 196.1 478 31.0
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.3e-47 195.3 473 30.7
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 1.8e-47 194.9 500 30.0
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.8e-47 194.9 500 30.0
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 3.9e-47 193.7 523 28.7
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 3.9e-47 193.7 523 28.7
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 5.1e-47 193.4 492 29.5
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 5.1e-47 193.4 381 33.1
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 6.7e-47 193.0 451 29.3
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 1.1e-46 192.2 476 30.7
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 1.1e-46 192.2 523 29.1
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.1e-46 192.2 383 32.6
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 1.5e-46 191.8 451 32.6
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 1.9e-46 191.4 449 32.1
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 2.5e-46 191.0 544 29.4
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 1.3e-45 188.7 451 30.6
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 1.3e-45 188.7 460 31.7
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.1e-45 188.0 455 30.1
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 2.8e-45 187.6 453 30.2
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 2.8e-45 187.6 447 30.0
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 2.8e-45 187.6 477 29.4
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 2.8e-45 187.6 453 31.1
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 4.8e-45 186.8 452 30.5
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 6.2e-45 186.4 454 30.6
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 8.1e-45 186.0 491 28.9
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 1.1e-44 185.7 491 30.1
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.4e-44 185.3 451 30.6
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 1.4e-44 185.3 456 30.3
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 1.4e-44 185.3 445 31.5
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 4.0e-44 183.7 447 31.5
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.9e-44 183.0 510 30.0
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 1.5e-43 181.8 537 29.6
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 1.3e-42 178.7 535 28.2
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.3e-42 178.7 521 28.4
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 2.2e-42 177.9 476 29.6
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 8.4e-42 176.0 646 26.5
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.9e-41 174.9 499 28.3
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 4.2e-41 173.7 292 37.0
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 5.5e-41 173.3 536 29.3
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 7.1e-41 172.9 475 28.8
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 9.3e-41 172.6 363 32.5
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 3.5e-40 170.6 415 29.9
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.8e-39 168.3 325 33.5
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 6.7e-39 166.4 218 41.7
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.5e-38 164.5 307 33.9
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 2.4e-36 157.9 512 26.4
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 8.4e-34 149.4 211 39.3
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 4.2e-33 147.1 495 27.9
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 1.5e-30 138.7 408 28.4
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 6.9e-28 129.8 313 30.4
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 1.4e-25 122.1 140 43.6
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 2.5e-25 121.3 192 37.5
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 3.0e-23 114.4 235 33.6
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 1.1e-22 112.5 137 42.3
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.2e-21 108.2 317 27.4
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 4.1e-20 104.0 186 37.1
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.9e-20 103.2 283 27.9
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 2.5e-17 94.7 147 37.4
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 7.9e-16 89.7 312 26.0
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.7e-14 83.6 123 37.4
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 9.7e-14 82.8 330 25.2
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 1.3e-10 72.4 105 40.0
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 9.7e-06 56.2 63 49.2


User provided reference genes

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