Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 2.9e-151 538.5 269 100.0
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 3.9e-63 245.7 206 60.7
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 4.4e-62 242.3 265 47.2
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 7.4e-62 241.5 182 65.9
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 2.2e-61 240.0 164 68.3
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.8e-61 238.8 200 61.0
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.7e-50 203.8 160 58.1
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.2e-48 197.6 155 60.0
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 1.8e-47 193.7 161 56.5
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 9.7e-46 188.0 199 48.7
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.7e-45 187.2 202 48.0
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 3.7e-45 186.0 203 50.2
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 6.3e-45 185.3 156 54.5
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.1e-44 184.5 170 52.9
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.1e-44 184.5 170 52.9
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.4e-44 184.1 181 50.3
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.4e-44 183.3 174 52.3
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.4e-44 183.3 174 52.3
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.1e-44 183.0 155 55.5
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.1e-44 183.0 155 55.5
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 3.1e-44 183.0 172 51.2
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 4.1e-44 182.6 177 49.2
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 5.3e-44 182.2 155 55.5
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 7.0e-44 181.8 160 51.9
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 7.0e-44 181.8 152 53.9
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 9.1e-44 181.4 155 52.9
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 9.1e-44 181.4 177 50.3
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 1.6e-43 180.6 159 53.5
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.6e-43 180.6 176 50.6
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 2.0e-43 180.3 153 54.2
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 2.0e-43 180.3 184 47.8
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 2.7e-43 179.9 156 55.1
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.7e-43 179.9 158 53.2
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 3.5e-43 179.5 176 50.6
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 4.5e-43 179.1 166 52.4
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.5e-43 179.1 181 48.1
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 4.5e-43 179.1 182 50.5
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 5.9e-43 178.7 147 55.1
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 5.9e-43 178.7 202 47.5
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 5.9e-43 178.7 175 50.9
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 7.7e-43 178.3 180 50.0
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 7.7e-43 178.3 150 55.3
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 7.7e-43 178.3 154 53.2
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 1.0e-42 177.9 179 48.6
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.0e-42 177.9 178 50.0
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.0e-42 177.9 169 50.3
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.0e-42 177.9 177 49.7
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.3e-42 177.6 171 50.3
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.7e-42 177.2 149 57.0
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 1.7e-42 177.2 149 55.0
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.2e-42 176.8 182 47.8
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 2.2e-42 176.8 201 45.3
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 3.8e-42 176.0 154 55.2
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 6.5e-42 175.3 206 44.7
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 8.5e-42 174.9 182 47.8
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.1e-41 174.5 169 53.3
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.1e-41 174.5 184 46.7
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.1e-41 174.5 178 48.9
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.1e-41 174.5 157 52.2
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.5e-41 174.1 180 48.9
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 1.9e-41 173.7 147 55.1
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.9e-41 173.7 160 53.8
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 1.9e-41 173.7 176 49.4
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 2.5e-41 173.3 154 50.0
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 2.5e-41 173.3 147 57.1
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 2.5e-41 173.3 201 46.3
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.2e-41 172.9 184 50.0
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 4.2e-41 172.6 175 50.3
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 7.2e-41 171.8 169 48.5
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 7.2e-41 171.8 147 57.1
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 7.2e-41 171.8 166 49.4
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 7.2e-41 171.8 154 53.2
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 7.2e-41 171.8 154 53.2
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 9.4e-41 171.4 192 46.4
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 9.4e-41 171.4 181 47.0
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 9.4e-41 171.4 177 49.7
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.6e-40 170.6 169 50.3
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.6e-40 170.6 154 51.9
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.6e-40 170.6 181 49.7
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.6e-40 170.6 157 51.6
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 2.1e-40 170.2 180 48.3
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 3.6e-40 169.5 174 48.3
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 1.0e-39 167.9 182 46.7
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.0e-39 167.9 154 51.9
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.8e-39 167.2 182 46.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.8e-39 167.2 179 47.5
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 3.0e-39 166.4 160 48.8
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.8e-39 165.2 153 49.7
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.8e-39 165.2 153 49.7
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 6.8e-39 165.2 153 49.7
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.2e-38 164.5 194 44.8
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.2e-38 164.5 179 48.0
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 2.0e-38 163.7 176 48.3
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 9.8e-38 161.4 160 49.4
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 1.3e-37 161.0 179 46.4
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 3.7e-37 159.5 162 50.0
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 4.8e-37 159.1 211 41.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 4.8e-37 159.1 166 47.0
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 2.4e-36 156.8 160 46.9
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 3.1e-36 156.4 160 46.2
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 3.1e-36 156.4 162 46.9
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 4.1e-36 156.0 156 48.7
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 4.1e-36 156.0 160 46.9
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 7.0e-36 155.2 180 46.1
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 9.1e-36 154.8 160 46.9
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.6e-35 154.1 160 46.9
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.6e-35 154.1 160 46.9
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.6e-35 154.1 160 46.9
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 2.0e-35 153.7 182 44.0
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.7e-35 153.3 161 46.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.5e-35 152.9 198 43.9
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 3.5e-35 152.9 162 45.7
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 4.5e-35 152.5 158 46.8
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 4.5e-35 152.5 160 46.9
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 5.9e-35 152.1 157 47.1
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 1.1e-33 147.9 185 43.8
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 7.2e-33 145.2 146 47.9
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 7.0e-28 128.6 156 42.9
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 5.9e-27 125.6 116 49.1
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 2.1e-24 117.1 154 40.3
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 3.1e-15 86.7 90 47.8
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 2.0e-11 73.9 48 62.5


User provided reference genes

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