Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 0.0e+00 1926.4 980 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 7.2e-256 887.9 963 51.0
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 1.9e-232 810.1 971 46.8
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 8.3e-220 768.1 1002 42.9
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.8e-219 766.9 1002 44.6
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 3.0e-209 733.0 983 43.6
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 4.3e-200 702.6 970 41.2
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 3.1e-198 696.4 973 41.7
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 3.4e-197 693.0 968 41.6
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 1.3e-196 691.0 986 41.5
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 2.2e-196 690.3 971 41.5
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 1.1e-195 688.0 960 42.1
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 1.1e-195 688.0 960 42.1
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 1.1e-195 688.0 977 41.1
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 3.2e-195 686.4 984 40.8
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 1.2e-194 684.5 972 41.6
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 1.2e-194 684.5 970 41.3
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 4.6e-194 682.6 965 39.9
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 1.7e-193 680.6 981 41.0
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 3.0e-193 679.9 955 40.8
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 3.0e-193 679.9 974 40.8
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 6.6e-193 678.7 959 40.9
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 2.5e-192 676.8 980 40.2
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.3e-192 676.4 978 40.4
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 4.3e-192 676.0 993 40.4
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 7.3e-192 675.2 988 40.3
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 7.3e-192 675.2 978 39.7
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 1.6e-191 674.1 974 41.7
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 1.1e-190 671.4 975 40.4
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 1.8e-190 670.6 963 41.5
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 6.9e-190 668.7 977 40.1
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 9.0e-190 668.3 966 39.4
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 3.4e-189 666.4 969 41.0
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 3.4e-189 666.4 987 40.2
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 5.8e-189 665.6 984 40.3
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 7.6e-189 665.2 954 40.7
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 1.3e-188 664.5 992 39.9
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 1.3e-188 664.5 978 40.2
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.2e-188 663.7 978 40.5
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.1e-187 661.4 970 39.3
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 2.4e-187 660.2 980 41.0
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 3.2e-187 659.8 991 40.0
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 5.4e-187 659.1 968 39.4
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 1.2e-186 657.9 987 38.9
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 4.6e-186 656.0 974 39.7
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 6.0e-186 655.6 970 40.0
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 6.0e-186 655.6 977 39.9
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 7.8e-186 655.2 982 39.2
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 1.3e-185 654.4 962 40.1
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 2.3e-185 653.7 973 39.7
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 6.6e-185 652.1 963 39.4
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 8.7e-185 651.7 970 40.1
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 1.1e-184 651.4 978 38.9
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 1.5e-184 651.0 982 39.0
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 3.3e-184 649.8 945 40.2
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 4.3e-184 649.4 972 40.4
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 7.3e-184 648.7 965 40.1
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 1.3e-183 647.9 973 39.6
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 1.3e-183 647.9 964 39.6
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 1.3e-183 647.9 975 38.6
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.8e-183 646.7 965 39.8
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 3.6e-183 646.4 985 39.3
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 4.8e-183 646.0 962 40.1
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 6.2e-183 645.6 954 39.6
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 6.2e-183 645.6 963 38.5
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 8.1e-183 645.2 971 40.1
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 8.1e-183 645.2 960 39.4
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 1.8e-182 644.0 966 39.2
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 2.0e-181 640.6 970 39.6
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 4.5e-181 639.4 973 39.8
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 2.2e-180 637.1 955 39.3
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 6.4e-180 635.6 965 39.3
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 8.4e-180 635.2 966 40.1
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 4.2e-179 632.9 972 38.7
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 5.4e-179 632.5 1038 37.8
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 2.1e-178 630.6 1051 37.0
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 1.0e-177 628.2 959 38.9
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 3.0e-177 626.7 924 40.2
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 1.1e-174 618.2 978 37.4
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 2.4e-174 617.1 976 38.4
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 5.5e-171 605.9 1042 36.5
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 2.1e-170 604.0 943 39.4
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 5.1e-169 599.4 940 39.0
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 1.5e-168 597.8 992 38.1
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 1.5e-168 597.8 950 38.7
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 3.1e-166 590.1 884 39.5
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 1.7e-164 584.3 945 37.6
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 4.6e-162 576.2 1162 34.5
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 1.4e-150 538.1 984 35.8
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 5.3e-150 536.2 726 42.1
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 9.1e-150 535.4 721 42.3
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 2.0e-149 534.3 872 38.1
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 2.5e-147 527.3 1068 34.5
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 6.7e-145 519.2 816 38.0
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 6.1e-138 496.1 779 39.0
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 8.2e-135 485.7 1455 27.1
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 3.4e-120 437.2 839 34.9
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 4.2e-115 420.2 636 38.5
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 3.6e-98 364.0 670 34.9
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 4.7e-98 363.6 627 36.2
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 4.7e-98 363.6 627 36.2
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.8e-89 335.1 575 35.5
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 1.7e-84 318.5 472 39.2
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 5.8e-80 303.5 420 41.2
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 8.4e-63 246.5 434 36.4
Ah.14g085900 Amaranthus hybridus HOM05D006302 ORTHO05D007960 4.5e-40 171.0 177 49.7
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 1.5e-32 146.0 220 39.5
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 3.3e-27 128.3 298 29.9
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 6.3e-26 124.0 360 28.6
Cpa.g.sc7.122 Carica papaya HOM05D006302 ORTHO05D007960 3.8e-15 88.2 119 42.9
Medtr6g074610 Medicago truncatula HOM05D006302 ORTHO05D007960 1.2e-08 66.6 119 34.5
Medtr6g075030 Medicago truncatula HOM05D006302 ORTHO05D007960 2.2e-07 62.4 73 42.5
Medtr6g072640 Medicago truncatula HOM05D006302 ORTHO05D007960 4.2e-06 58.2 61 45.9


User provided reference genes

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