Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 0.0e+00 2524.2 1367 100.0
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.9e-222 777.3 1366 37.3
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.5e-163 581.6 1352 32.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 4.9e-162 576.6 1341 32.5
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 2.2e-154 551.2 1330 30.1
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 2.5e-153 547.7 1355 31.0
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 1.8e-151 541.6 1338 31.8
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 6.3e-149 533.1 1339 30.5
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 5.3e-148 530.0 1352 30.0
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 2.9e-146 524.2 1325 30.3
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 7.2e-145 519.6 1357 30.9
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 9.4e-145 519.2 1343 28.7
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 1.2e-144 518.8 1343 28.7
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 1.0e-143 515.8 1354 29.6
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.3e-143 514.6 1335 30.4
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 2.0e-142 511.5 1339 30.3
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 4.4e-142 510.4 1364 29.9
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 9.7e-142 509.2 1330 29.7
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 9.7e-142 509.2 1343 28.6
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.8e-141 507.7 1348 28.3
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 4.8e-141 506.9 1358 30.7
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 6.3e-141 506.5 1377 30.6
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 8.2e-141 506.1 1380 30.7
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 1.4e-140 505.4 1331 29.8
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.8e-140 505.0 1348 28.3
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 3.1e-140 504.2 1337 28.9
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 4.1e-140 503.8 1362 29.6
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 2.0e-139 501.5 1283 29.9
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 2.0e-139 501.5 1336 28.7
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 3.4e-139 500.7 1348 28.2
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 5.9e-139 500.0 1341 28.6
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 7.7e-139 499.6 1340 30.1
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 7.7e-139 499.6 1333 29.2
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.3e-138 498.8 1333 29.8
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 1.3e-138 498.8 1325 30.0
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 2.9e-138 497.7 1380 28.6
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 5.0e-138 496.9 1346 28.3
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 7.2e-137 493.0 919 35.4
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.2e-136 492.3 1264 30.1
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.7e-136 491.1 1341 29.2
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 3.6e-136 490.7 1335 29.2
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 6.7e-135 486.5 1336 29.3
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 1.5e-134 485.3 1346 29.7
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 9.7e-134 482.6 1359 27.7
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 9.7e-134 482.6 1345 28.2
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.3e-133 482.3 1363 26.9
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 1.4e-132 478.8 1344 28.1
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 2.6e-131 474.6 1335 28.3
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 4.5e-131 473.8 1371 28.2
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 5.9e-131 473.4 1334 28.9
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 5.9e-131 473.4 1334 28.6
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 1.5e-129 468.8 1346 28.2
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 2.5e-129 468.0 1349 27.8
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.6e-128 465.3 1352 27.4
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 1.8e-127 461.8 1295 28.6
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 5.2e-127 460.3 919 33.3
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 6.7e-127 459.9 1368 26.9
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 2.0e-126 458.4 936 35.3
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 2.6e-126 458.0 1340 27.1
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 5.7e-126 456.8 1329 27.2
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 7.5e-126 456.4 949 35.0
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 1.3e-125 455.7 1328 28.2
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 2.8e-125 454.5 1315 29.2
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 6.3e-125 453.4 1336 26.7
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 1.8e-124 451.8 1358 27.6
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 6.5e-122 443.4 1186 30.9
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 1.5e-121 442.2 1294 27.3
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.2e-121 441.0 914 30.9
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 4.2e-121 440.7 1003 33.1
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.2e-120 439.1 1339 27.1
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.4e-118 430.6 1186 29.9
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 7.5e-118 429.9 1220 29.0
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 2.8e-117 427.9 1379 26.6
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.2e-115 422.5 1044 31.0
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 7.7e-115 419.9 1342 25.9
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 4.2e-113 414.1 1331 26.4
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 4.4e-110 404.1 1371 27.1
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 2.5e-105 388.3 1007 30.0
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 9.5e-105 386.3 1332 26.0
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 2.8e-104 384.8 798 33.2
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.2e-102 379.4 917 29.7
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.2e-94 352.8 797 32.7
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 2.6e-94 351.7 1336 26.6
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 2.7e-91 341.7 626 31.8
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 1.2e-88 332.8 977 28.8
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 8.9e-79 300.1 971 26.6
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 5.8e-70 270.8 815 29.6
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.1e-67 262.3 807 28.7
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 5.1e-58 231.1 964 24.3
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 2.1e-56 225.7 261 47.1
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.0e-55 221.5 670 28.7
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 3.5e-51 208.4 655 27.0
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 7.4e-49 200.7 699 25.8
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 2.9e-45 188.7 345 35.4
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.5e-43 181.8 357 33.6
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.7e-42 177.2 247 37.2
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.9e-39 167.5 491 29.3
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 5.9e-38 164.5 541 26.4
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 9.1e-31 140.6 554 27.3
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 5.0e-29 134.8 209 40.7
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.5e-29 134.4 374 29.4
CBR_g41430 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-28 133.3 249 33.7
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 2.7e-27 129.0 148 48.0
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.0e-25 122.9 148 45.9
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.1e-23 117.1 145 44.1
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 3.5e-22 112.1 150 43.3
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 3.5e-22 112.1 508 23.8
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 4.5e-22 111.7 466 25.5
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 5.9e-22 111.3 289 30.1
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 2.2e-21 109.4 140 42.1
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.4e-18 100.1 369 23.6
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 1.8e-18 99.8 621 22.1
CBR_g34900 Chara braunii HOM05D002414 ORTHO05D002531 2.0e-14 86.3 602 21.6
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.5e-14 85.5 379 24.0
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 7.7e-14 84.3 403 24.8
SEGI_21308 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 3.2e-12 79.0 83 45.8
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 7.2e-12 77.8 131 32.1
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.4e-10 73.6 139 35.3
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 7.5e-09 67.8 119 40.3
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 1.7e-08 66.6 203 27.1
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 1.2e-06 60.5 167 26.9
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 2.7e-06 59.3 153 27.5


User provided reference genes

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