Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.8e-70 269.6 190 100.0
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.1e-27 127.5 151 70.2
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.1e-27 127.5 142 73.9
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.4e-27 127.1 145 74.5
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.5e-27 126.3 154 72.1
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.2e-26 124.0 135 75.6
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 1.6e-26 123.6 156 66.7
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.6e-26 123.6 140 73.6
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.1e-26 123.2 163 68.7
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 2.7e-26 122.9 130 80.0
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 2.7e-26 122.9 132 76.5
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.5e-26 122.5 130 79.2
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.6e-26 122.1 130 79.2
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.6e-26 122.1 130 79.2
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 4.6e-26 122.1 137 75.9
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.6e-26 122.1 132 75.8
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.6e-26 122.1 132 75.8
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 4.6e-26 122.1 132 75.8
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 7.9e-26 121.3 140 70.0
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.0e-25 120.9 130 79.2
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 1.0e-25 120.9 161 68.3
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.0e-25 120.9 159 67.3
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.3e-25 120.6 154 68.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.3e-25 120.6 144 66.7
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.3e-25 120.6 129 76.7
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.8e-25 120.2 147 68.7
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.3e-25 119.8 134 74.6
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 3.0e-25 119.4 163 64.4
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.0e-25 119.4 164 66.5
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 3.9e-25 119.0 150 67.3
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.9e-25 119.0 130 77.7
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 3.9e-25 119.0 133 74.4
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 5.1e-25 118.6 132 75.0
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 5.1e-25 118.6 130 78.5
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 6.7e-25 118.2 123 78.0
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 6.7e-25 118.2 133 75.2
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 6.7e-25 118.2 184 61.4
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 6.7e-25 118.2 121 77.7
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 6.7e-25 118.2 121 77.7
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.1e-24 117.5 145 73.1
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.1e-24 117.5 145 73.1
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 1.1e-24 117.5 140 71.4
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.5e-24 117.1 164 67.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.5e-24 117.1 145 70.3
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.9e-24 116.7 143 72.0
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.9e-24 116.7 129 77.5
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.9e-24 116.7 129 78.3
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.5e-24 116.3 129 77.5
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.5e-24 116.3 132 72.0
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.3e-24 115.9 143 71.3
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 3.3e-24 115.9 132 73.5
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 4.3e-24 115.5 148 68.9
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 5.7e-24 115.2 146 69.9
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 7.4e-24 114.8 167 63.5
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 7.4e-24 114.8 146 70.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 9.7e-24 114.4 133 75.9
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.7e-24 114.4 141 70.2
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.6e-23 113.6 125 75.2
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.6e-23 113.6 132 73.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.6e-23 113.6 142 68.3
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.2e-23 113.2 157 65.6
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 2.2e-23 113.2 142 71.8
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.2e-23 113.2 129 75.2
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 2.8e-23 112.8 144 69.4
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 2.8e-23 112.8 134 71.6
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.8e-23 112.8 132 69.7
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 3.7e-23 112.5 163 65.6
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 3.7e-23 112.5 134 73.1
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.7e-23 112.5 112 79.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 6.3e-23 111.7 143 69.2
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 8.2e-23 111.3 183 60.1
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.1e-22 110.9 113 83.2
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.8e-22 110.2 115 51.3
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.8e-22 110.2 165 63.6
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 4.1e-22 109.0 135 68.9
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 5.3e-22 108.6 174 60.3
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 6.9e-22 108.2 159 65.4
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 9.0e-22 107.8 111 62.2
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 9.0e-22 107.8 164 64.6
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.6e-21 106.3 111 81.1
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 3.4e-21 105.9 132 71.2
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.0e-20 104.4 132 71.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.3e-20 104.0 137 70.1
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.7e-20 103.6 129 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 2.9e-20 102.8 120 77.5
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.1e-19 100.9 144 66.0
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 5.5e-19 98.6 137 44.5
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-18 97.4 128 57.0
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.0e-17 92.8 68 66.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.1e-16 90.9 71 57.7
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.5e-16 90.5 66 68.2
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.5e-16 90.5 154 63.0
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 3.3e-16 89.4 145 64.1
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.8e-15 86.3 68 61.8
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 5.3e-14 82.0 92 50.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 4.5e-13 79.0 109 66.1
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.8e-12 75.9 114 39.5
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 8.5e-12 74.7 89 67.4
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 3.2e-11 72.8 172 55.2
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 7.9e-10 68.2 140 61.4
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.7e-07 60.5 130 36.2
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 7.0e-06 55.1 141 54.6


User provided reference genes

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