Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 8.2e-154 547.0 268 100.0
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.9e-73 280.0 198 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.3e-70 269.2 217 60.8
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 8.2e-61 238.0 201 54.7
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 6.5e-58 228.4 192 55.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 3.2e-57 226.1 211 52.6
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 9.4e-57 224.6 195 54.9
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.1e-56 223.4 204 52.9
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 1.0e-55 221.1 195 54.9
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.3e-55 219.9 194 55.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 3.0e-55 219.5 219 51.1
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 5.1e-55 218.8 179 57.5
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 6.7e-55 218.4 213 51.6
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.1e-54 217.6 194 55.2
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.1e-54 217.6 186 56.5
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.0e-54 216.9 191 55.5
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 3.3e-54 216.1 194 54.6
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 4.3e-54 215.7 195 54.9
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 7.4e-54 214.9 196 54.6
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 9.7e-54 214.5 190 55.8
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 9.7e-54 214.5 207 51.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 9.7e-54 214.5 199 52.3
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 9.7e-54 214.5 206 54.9
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.3e-53 214.2 225 48.9
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 2.2e-53 213.4 195 53.8
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 2.2e-53 213.4 205 51.7
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.8e-53 213.0 207 53.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 2.8e-53 213.0 177 55.9
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 2.8e-53 213.0 206 53.4
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 2.8e-53 213.0 187 55.1
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 4.8e-53 212.2 190 54.2
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 4.8e-53 212.2 234 48.7
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.8e-53 212.2 205 51.7
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 8.2e-53 211.5 190 54.2
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 8.2e-53 211.5 186 53.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.2e-53 211.5 205 51.7
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.4e-52 210.7 248 42.7
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.8e-52 210.3 176 56.8
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 4.1e-52 209.1 204 50.5
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 5.3e-52 208.8 202 48.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 5.3e-52 208.8 188 55.3
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 9.1e-52 208.0 188 52.7
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 9.1e-52 208.0 206 51.5
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.2e-51 207.6 259 44.8
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.5e-51 207.2 180 56.1
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.5e-51 207.2 180 55.0
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.4e-51 206.1 181 53.0
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 4.5e-51 205.7 199 52.3
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 7.7e-51 204.9 178 54.5
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 7.7e-51 204.9 204 49.5
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 7.7e-51 204.9 192 50.5
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.0e-50 204.5 178 58.4
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.3e-50 204.1 194 53.1
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.7e-50 203.8 175 54.3
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 2.2e-50 203.4 180 55.0
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 2.2e-50 203.4 190 51.1
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 3.8e-50 202.6 181 53.0
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 5.0e-50 202.2 178 54.5
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 5.0e-50 202.2 191 50.8
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 6.5e-50 201.8 229 45.4
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 6.5e-50 201.8 179 54.2
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.5e-50 201.8 194 51.0
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.5e-50 201.8 194 51.0
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 6.5e-50 201.8 217 47.5
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 8.5e-50 201.4 201 50.7
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.1e-49 201.1 221 48.0
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.9e-49 200.3 204 49.0
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.2e-49 199.5 184 52.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 5.5e-49 198.7 178 52.8
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 5.5e-49 198.7 206 50.0
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 7.2e-49 198.4 215 47.4
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.2e-48 197.6 176 54.5
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.6e-48 197.2 215 47.4
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.7e-48 196.4 220 47.7
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.7e-48 196.4 177 54.2
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.8e-47 193.7 271 41.3
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.8e-47 193.7 196 50.5
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.7e-47 191.8 214 46.3
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 3.3e-46 189.5 268 41.0
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.3e-46 189.5 183 50.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 5.7e-46 188.7 268 40.3
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.7e-46 188.7 191 51.3
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 9.7e-46 188.0 196 47.4
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.3e-45 187.6 133 63.9
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.0e-38 163.7 115 63.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 2.6e-38 163.3 184 47.3
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 9.7e-38 161.4 132 55.3
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.2e-27 127.9 171 39.8
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.7e-27 126.7 131 48.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 3.6e-24 116.3 122 50.0
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 6.8e-23 112.1 123 48.0
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 2.8e-21 106.7 178 36.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.6e-19 100.9 77 53.2
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 2.8e-16 90.1 83 49.4
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 4.4e-14 82.8 121 40.5
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 4.9e-13 79.3 82 43.9
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 3.6e-08 63.2 74 41.9
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 7.5e-06 55.5 65 47.7
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 7.5e-06 55.5 76 39.5


User provided reference genes

Program Settings