Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0167s0005 Marchantia polymorpha HOM05D033448 ORTHO05D036679 7.7e-159 563.9 316 100.0
Mapoly0167s0003 Marchantia polymorpha HOM05D033448 ORTHO05D036679 6.8e-123 444.5 318 72.3
Mapoly0255s0001 Marchantia polymorpha HOM05D033448 ORTHO05D036679 1.2e-82 310.8 314 61.5
FvH4_6g05700 Fragaria vesca HOM05D001521 ORTHO05D001342 6.8e-14 82.4 178 25.3
FAN09G0517 Fragaria x ananassa HOM05D001521 ORTHO05D001342 8.8e-14 82.0 178 25.3
FAN14G2703 Fragaria x ananassa HOM05D001521 ORTHO05D001342 8.8e-14 82.0 178 25.3
FvH4_6g22110 Fragaria vesca HOM05D001521 ORTHO05D001342 2.4e-11 73.9 179 24.6
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 4.1e-11 73.2 183 25.1
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 7.0e-11 72.4 176 26.1
FAN14G0906 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.2e-10 71.6 179 24.6
RcHm_v2.0_Chr3g0479441 Rosa chinensis HOM05D001521 ORTHO05D001342 1.2e-10 71.6 173 24.3
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 2.0e-10 70.9 168 28.6
SalBow6G1515 Salvia bowleyana HOM05D001521 ORTHO05D001342 2.0e-10 70.9 173 29.5
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 2.7e-10 70.5 183 23.0
RcHm_v2.0_Chr2g0163591 Rosa chinensis HOM05D001521 ORTHO05D001342 7.7e-10 68.9 173 22.5
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.7e-09 67.8 176 25.6
RcHm_v2.0_Chr2g0163691 Rosa chinensis HOM05D001521 ORTHO05D001342 2.3e-09 67.4 173 22.5
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 3.8e-09 66.6 165 24.8
RcHm_v2.0_Chr2g0163741 Rosa chinensis HOM05D001521 ORTHO05D001342 5.0e-09 66.2 173 22.5
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 6.6e-09 65.9 193 22.8
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 2.5e-08 63.9 168 25.6
RcHm_v2.0_Chr2g0163671 Rosa chinensis HOM05D001521 ORTHO05D001342 3.3e-08 63.5 170 22.9
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 4.2e-08 63.2 169 23.7
RcHm_v2.0_Chr5g0072501 Rosa chinensis HOM05D001521 ORTHO05D001342 4.2e-08 63.2 169 23.7
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 9.5e-08 62.0 151 29.8
RcHm_v2.0_Chr2g0163661 Rosa chinensis HOM05D001521 ORTHO05D001342 1.2e-07 61.6 172 29.1
FvH4_6g45590 Fragaria vesca HOM05D001521 ORTHO05D001342 2.1e-07 60.8 187 23.0
RcHm_v2.0_Chr2g0163631 Rosa chinensis HOM05D001521 ORTHO05D001342 2.1e-07 60.8 172 27.9
Rhsim05G0009800 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.8e-07 60.5 165 24.8
FAN09G3650 Fragaria x ananassa HOM05D001521 ORTHO05D001342 3.6e-07 60.1 164 20.7
RcHm_v2.0_Chr2g0163571 Rosa chinensis HOM05D001521 ORTHO05D001342 8.0e-07 58.9 175 25.1
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.0e-06 58.5 149 24.8
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 1.0e-06 58.5 157 22.9
Duzib177G1049 Durio zibethinus HOM05D001521 ORTHO05D001342 2.3e-06 57.4 164 23.2
FvH4_6g46040 Fragaria vesca HOM05D001521 ORTHO05D001342 4.0e-06 56.6 168 19.6
FAN05G2842 Fragaria x ananassa HOM05D001521 ORTHO05D001342 6.8e-06 55.8 168 19.0
PSO349G0188 Papaver somniferum HOM05D001521 ORTHO05D001342 6.8e-06 55.8 161 24.2
PSO349G0338 Papaver somniferum HOM05D001521 ORTHO05D001342 6.8e-06 55.8 161 24.2


User provided reference genes

Program Settings