Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0167s0003 Marchantia polymorpha HOM05D033448 ORTHO05D036679 3.8e-260 901.0 458 100.0
Mapoly0167s0005 Marchantia polymorpha HOM05D033448 ORTHO05D036679 8.3e-122 441.4 318 72.3
Mapoly0255s0001 Marchantia polymorpha HOM05D033448 ORTHO05D036679 3.6e-93 346.3 316 61.4
FvH4_6g05700 Fragaria vesca HOM05D001521 ORTHO05D001342 9.8e-14 82.4 178 25.8
FAN09G0517 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.3e-13 82.0 178 25.8
FAN14G2703 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.7e-13 81.6 178 25.8
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 7.0e-12 76.3 178 27.5
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 1.6e-11 75.1 218 24.3
SalBow6G1515 Salvia bowleyana HOM05D001521 ORTHO05D001342 6.0e-11 73.2 173 28.3
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 7.8e-11 72.8 324 23.5
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 1.3e-10 72.0 168 29.8
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.3e-10 71.2 176 27.3
Dinv37733 Davidia involucrata HOM05D001521 ORTHO05D001342 3.0e-10 70.9 181 27.6
RcHm_v2.0_Chr2g0163591 Rosa chinensis HOM05D001521 ORTHO05D001342 3.0e-10 70.9 328 20.7
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.9e-10 70.5 167 25.7
RcHm_v2.0_Chr3g0479441 Rosa chinensis HOM05D001521 ORTHO05D001342 6.6e-10 69.7 167 24.0
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 6.6e-10 69.7 172 25.6
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.6e-10 69.3 178 25.3
RcHm_v2.0_Chr2g0163691 Rosa chinensis HOM05D001521 ORTHO05D001342 1.5e-09 68.6 326 19.6
RcHm_v2.0_Chr2g0163741 Rosa chinensis HOM05D001521 ORTHO05D001342 2.5e-09 67.8 326 19.6
Actinidia11759 Actinidia chinensis HOM05D001521 ORTHO05D001342 3.3e-09 67.4 168 24.4
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 5.6e-09 66.6 163 25.8
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 7.3e-09 66.2 220 24.5
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.6e-08 65.1 167 26.9
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 2.8e-08 64.3 172 25.0
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 4.7e-08 63.5 176 26.7
Cpa.g.c42995 Carica papaya HOM05D001521 ORTHO05D001342 6.2e-08 63.2 150 28.0
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 6.2e-08 63.2 168 26.2
Rhsim07G0026400 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.4e-07 62.0 178 24.2
RcHm_v2.0_Chr5g0072501 Rosa chinensis HOM05D001521 ORTHO05D001342 1.4e-07 62.0 167 24.0
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-07 62.0 339 22.7
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 1.8e-07 61.6 164 24.4
Duzib177G1049 Durio zibethinus HOM05D001521 ORTHO05D001342 1.8e-07 61.6 164 25.0
FAN05G2510 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.3e-07 61.2 168 25.6
PSO349G0188 Papaver somniferum HOM05D001521 ORTHO05D001342 3.1e-07 60.8 171 25.7
PSO349G0338 Papaver somniferum HOM05D001521 ORTHO05D001342 3.1e-07 60.8 171 25.7
RcHm_v2.0_Chr2g0163671 Rosa chinensis HOM05D001521 ORTHO05D001342 3.1e-07 60.8 168 22.6
FvH4_6g45590 Fragaria vesca HOM05D001521 ORTHO05D001342 5.2e-07 60.1 173 23.1
FAN09G3650 Fragaria x ananassa HOM05D001521 ORTHO05D001342 8.9e-07 59.3 164 20.7
MELO3C022437.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.5e-06 58.5 164 25.0
CsaV3_6G006860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.0e-06 58.2 378 22.5
Duzib177G1034 Durio zibethinus HOM05D001521 ORTHO05D001342 2.0e-06 58.2 164 23.8
RcHm_v2.0_Chr2g0163631 Rosa chinensis HOM05D001521 ORTHO05D001342 2.0e-06 58.2 169 25.4
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-06 58.2 165 23.0
RcHm_v2.0_Chr2g0163661 Rosa chinensis HOM05D001521 ORTHO05D001342 2.6e-06 57.8 174 27.0
FAN05G2842 Fragaria x ananassa HOM05D001521 ORTHO05D001342 3.4e-06 57.4 168 19.6
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 4.4e-06 57.0 165 22.4
RcHm_v2.0_Chr2g0163571 Rosa chinensis HOM05D001521 ORTHO05D001342 4.4e-06 57.0 171 25.7
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 5.8e-06 56.6 164 23.8
FvH4_6g46040 Fragaria vesca HOM05D001521 ORTHO05D001342 5.8e-06 56.6 168 19.6
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 9.8e-06 55.8 144 28.5


User provided reference genes

Program Settings