Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 2.3e-241 839.0 441 100.0
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 3.2e-22 110.9 230 34.3
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 4.2e-22 110.5 234 34.6
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 5.5e-22 110.2 239 31.4
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 5.5e-22 110.2 241 30.7
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 7.2e-22 109.8 283 30.0
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 1.2e-21 109.0 232 31.5
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 2.7e-21 107.8 239 30.5
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 3.6e-21 107.5 222 31.5
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 3.6e-21 107.5 239 30.1
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 3.6e-21 107.5 238 30.7
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 4.7e-21 107.1 224 30.4
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 1.4e-20 105.5 232 28.9
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 1.4e-20 105.5 222 31.5
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 1.8e-20 105.1 233 31.3
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 2.3e-20 104.8 230 30.4
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 3.0e-20 104.4 225 32.9
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 3.0e-20 104.4 227 35.2
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 4.0e-20 104.0 234 30.3
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 8.8e-20 102.8 241 29.9
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 8.8e-20 102.8 282 30.5
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 8.8e-20 102.8 292 29.5
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 1.2e-19 102.4 226 31.4
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 1.2e-19 102.4 226 31.4
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 1.5e-19 102.1 232 31.9
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.5e-19 102.1 239 29.3
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 2.6e-19 101.3 234 29.5
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 3.4e-19 100.9 238 28.6
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 3.4e-19 100.9 232 31.5
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 7.5e-19 99.8 226 31.4
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 7.5e-19 99.8 241 28.6
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 9.8e-19 99.4 229 28.8
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 1.3e-18 99.0 186 33.3
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 1.3e-18 99.0 237 30.0
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 1.3e-18 99.0 241 30.3
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 1.7e-18 98.6 238 30.7
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 2.8e-18 97.8 224 28.6
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 2.8e-18 97.8 222 31.5
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 2.8e-18 97.8 297 28.3
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 3.7e-18 97.4 294 28.6
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 3.7e-18 97.4 226 29.2
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 3.7e-18 97.4 242 28.1
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 4.8e-18 97.1 274 31.8
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 4.8e-18 97.1 227 29.1
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 6.3e-18 96.7 283 29.7
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 6.3e-18 96.7 282 28.7
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 6.3e-18 96.7 291 28.2
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 8.3e-18 96.3 241 29.5
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 8.3e-18 96.3 282 29.4
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.1e-17 95.9 227 29.5
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 1.4e-17 95.5 274 30.3
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.4e-17 95.5 186 31.7
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 1.8e-17 95.1 233 32.2
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 1.8e-17 95.1 232 29.3
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 1.8e-17 95.1 296 26.7
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.8e-17 95.1 296 26.7
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 2.4e-17 94.7 269 27.5
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.4e-17 94.7 226 28.8
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 2.4e-17 94.7 226 28.8
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 4.1e-17 94.0 237 32.1
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 4.1e-17 94.0 296 28.0
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 4.1e-17 94.0 236 33.9
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 5.4e-17 93.6 230 29.6
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 5.4e-17 93.6 237 32.1
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 5.4e-17 93.6 237 32.1
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 5.4e-17 93.6 226 28.3
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 5.4e-17 93.6 226 30.1
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 9.1e-17 92.8 295 31.5
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 9.1e-17 92.8 226 28.3
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 9.1e-17 92.8 297 26.9
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 9.1e-17 92.8 229 27.9
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 9.1e-17 92.8 289 31.5
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 1.2e-16 92.4 241 31.5
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 1.2e-16 92.4 241 29.0
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 1.6e-16 92.0 229 28.8
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 2.7e-16 91.3 237 33.8
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.7e-16 91.3 219 29.7
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 2.7e-16 91.3 285 31.2
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 2.7e-16 91.3 284 29.2
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 2.7e-16 91.3 245 29.8
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.5e-16 90.5 226 27.9
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 4.5e-16 90.5 296 25.7
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 7.7e-16 89.7 291 27.8
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 1.0e-15 89.4 181 32.6
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.0e-15 89.4 228 30.3
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 1.7e-15 88.6 238 29.0
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 3.8e-15 87.4 239 34.3
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 3.8e-15 87.4 239 31.0
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 1.1e-14 85.9 240 34.6
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 1.5e-14 85.5 238 34.5
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 1.5e-14 85.5 284 28.2
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 1.9e-14 85.1 140 32.1
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 1.9e-14 85.1 278 28.4
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 2.5e-14 84.7 288 27.4
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 2.1e-13 81.6 241 28.2
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 4.7e-13 80.5 225 30.2
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 8.0e-13 79.7 282 26.6
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 8.0e-13 79.7 314 26.1
Pp3c13_18720 Physcomitrium patens HOM05D006770 ORTHO05D008356 1.0e-12 79.3 273 27.1
Pp3c13_18722 Physcomitrium patens HOM05D006770 ORTHO05D008356 1.0e-12 79.3 273 27.1
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 4.0e-12 77.4 186 29.6
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 1.2e-11 75.9 239 32.6
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 1.2e-11 75.9 131 34.4
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 3.4e-11 74.3 226 27.4
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 2.8e-10 71.2 242 27.7
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 9.2e-09 66.2 85 35.3
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 3.3e-06 57.8 103 29.1


User provided reference genes

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