Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 9.3e-243 843.2 447 100.0
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 9.5e-46 188.7 494 33.0
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 7.8e-40 169.1 499 29.3
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 1.3e-39 168.3 472 32.2
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 2.3e-39 167.5 501 30.3
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.1e-38 165.2 466 30.7
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.1e-38 165.2 460 31.5
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.9e-38 164.5 496 28.4
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.9e-38 164.5 454 31.5
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 7.3e-38 162.5 444 30.6
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 7.3e-38 162.5 460 30.4
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 2.8e-37 160.6 495 31.1
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 3.6e-37 160.2 482 29.0
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.6e-37 160.2 453 29.6
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 3.6e-37 160.2 480 29.8
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.4e-36 158.3 449 29.2
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.4e-36 158.3 456 30.7
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.8e-36 157.9 462 30.1
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.3e-36 157.5 448 31.2
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 4.0e-36 156.8 456 30.5
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 6.8e-36 156.0 462 29.9
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 8.9e-36 155.6 425 30.8
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 2.6e-35 154.1 485 27.8
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 3.4e-35 153.7 500 27.6
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.4e-35 153.3 426 28.9
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.8e-35 152.9 507 30.4
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 7.5e-35 152.5 431 29.5
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 9.8e-35 152.1 495 28.5
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.3e-34 151.8 456 31.8
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.3e-34 151.8 452 30.1
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.7e-34 151.4 445 28.1
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.7e-34 151.4 503 30.4
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.7e-34 151.4 472 29.0
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 1.7e-34 151.4 471 30.1
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.7e-34 150.2 507 30.2
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 6.4e-34 149.4 458 28.6
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.1e-33 148.7 460 27.6
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 1.4e-33 148.3 483 29.2
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.9e-33 147.9 460 29.8
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 4.1e-33 146.7 523 28.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 4.1e-33 146.7 473 29.0
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 7.1e-33 146.0 436 27.1
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 7.1e-33 146.0 436 26.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.2e-32 145.2 458 27.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.6e-32 144.8 427 28.1
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 3.5e-32 143.7 402 29.4
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.5e-32 143.7 455 30.3
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 7.8e-32 142.5 479 29.0
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 7.8e-32 142.5 491 28.3
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.3e-31 141.7 514 29.0
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.7e-31 141.4 428 30.8
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.3e-31 141.0 498 27.7
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.0e-31 140.6 492 27.4
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 5.1e-31 139.8 484 27.1
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.1e-30 138.7 545 27.0
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.5e-30 138.3 432 29.4
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.9e-30 137.9 450 29.3
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 2.5e-30 137.5 430 27.0
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 7.3e-30 136.0 527 26.4
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 1.2e-29 135.2 480 27.9
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.8e-29 134.0 492 27.0
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 3.6e-29 133.7 501 27.5
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.4e-28 131.7 474 29.5
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 5.2e-28 129.8 440 26.6
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 8.9e-28 129.0 539 26.0
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.2e-27 128.6 533 26.3
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 2.0e-27 127.9 574 27.2
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 5.8e-27 126.3 534 25.7
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 2.2e-26 124.4 359 30.6
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 6.4e-26 122.9 538 25.5
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.4e-25 120.9 454 29.7
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 5.4e-25 119.8 506 25.1
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 4.6e-24 116.7 607 25.2
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 7.8e-24 115.9 501 27.7
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.3e-23 115.2 505 25.5
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 3.9e-23 113.6 403 29.3
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 5.1e-23 113.2 390 27.4
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 1.9e-22 111.3 461 26.9
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.2e-19 102.1 473 24.9
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.2e-17 94.0 546 23.8
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 7.1e-17 92.8 496 26.6
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 6.6e-15 86.3 421 27.3
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 8.7e-15 85.9 411 24.1
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 1.1e-14 85.5 110 39.1
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.9e-14 84.7 411 24.1
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 4.3e-14 83.6 374 26.2
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.4e-12 78.6 361 22.4
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 1.4e-09 68.6 73 46.6
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 7.1e-09 66.2 136 33.1
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 2.7e-08 64.3 192 25.5
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 6.0e-08 63.2 142 27.5


User provided reference genes

Program Settings