Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 1.5e-72 276.2 146 100.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 8.0e-18 94.4 128 42.2
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 4.4e-16 88.6 139 39.6
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 4.8e-15 85.1 141 36.9
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.2e-13 80.5 121 38.0
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.2e-13 80.5 121 38.0
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 1.6e-13 80.1 121 39.7
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 2.0e-13 79.7 121 38.0
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.6e-13 79.3 132 34.1
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 4.5e-13 78.6 121 40.5
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 5.9e-13 78.2 122 37.7
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 5.9e-13 78.2 122 40.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.9e-13 78.2 122 38.5
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.9e-13 78.2 121 38.0
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 5.9e-13 78.2 133 33.8
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 5.9e-13 78.2 122 34.4
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 7.7e-13 77.8 121 34.7
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 7.7e-13 77.8 137 34.3
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 7.7e-13 77.8 123 40.7
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.0e-12 77.4 127 35.4
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 1.0e-12 77.4 129 35.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.3e-12 77.0 126 34.1
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 1.3e-12 77.0 123 39.0
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.7e-12 76.6 127 37.0
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.7e-12 76.6 126 34.1
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.7e-12 76.6 127 33.9
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.7e-12 76.6 121 37.2
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 2.2e-12 76.3 126 34.1
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 2.2e-12 76.3 119 42.9
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.9e-12 75.9 121 37.2
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 2.9e-12 75.9 121 35.5
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 3.8e-12 75.5 121 39.7
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.8e-12 75.5 125 35.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 5.0e-12 75.1 121 36.4
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 5.0e-12 75.1 122 39.3
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 6.5e-12 74.7 129 38.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 6.5e-12 74.7 121 37.2
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 6.5e-12 74.7 121 38.8
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 6.5e-12 74.7 122 34.4
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 6.5e-12 74.7 128 35.9
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.5e-11 73.6 132 35.6
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.5e-11 73.6 138 34.8
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 1.9e-11 73.2 125 36.0
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 1.9e-11 73.2 122 38.5
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 2.5e-11 72.8 121 36.4
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 2.5e-11 72.8 131 33.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 2.5e-11 72.8 126 34.9
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 3.2e-11 72.4 121 36.4
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 3.2e-11 72.4 133 34.6
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 3.2e-11 72.4 126 35.7
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.2e-11 72.4 133 32.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 4.2e-11 72.0 136 33.1
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 5.5e-11 71.6 133 31.6
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 7.2e-11 71.2 123 36.6
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 7.2e-11 71.2 128 32.8
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 7.2e-11 71.2 128 36.7
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 7.2e-11 71.2 137 34.3
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 9.4e-11 70.9 121 37.2
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 9.4e-11 70.9 138 36.2
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 9.4e-11 70.9 133 31.6
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.6e-10 70.1 121 38.0
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.1e-10 69.7 126 33.3
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 2.1e-10 69.7 120 36.7
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 2.1e-10 69.7 129 33.3
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.6e-10 68.9 129 33.3
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 3.6e-10 68.9 130 33.1
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 4.7e-10 68.6 121 33.1
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 4.7e-10 68.6 122 36.9
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 6.1e-10 68.2 127 32.3
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 8.0e-10 67.8 121 34.7
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 8.0e-10 67.8 121 33.1
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 8.0e-10 67.8 138 31.2
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 1.4e-09 67.0 134 31.3
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 1.8e-09 66.6 128 32.8
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 2.3e-09 66.2 124 30.6
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 3.0e-09 65.9 121 33.1
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 3.0e-09 65.9 133 33.1
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.0e-09 65.9 128 35.9
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 4.0e-09 65.5 133 32.3
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 5.2e-09 65.1 124 30.6
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 5.2e-09 65.1 121 34.7
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 8.8e-09 64.3 127 32.3
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 8.8e-09 64.3 127 32.3
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.0e-08 63.2 141 31.9
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 2.6e-08 62.8 123 33.3
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 4.4e-08 62.0 118 33.1
Pp3c8_14510 Physcomitrium patens HOM05D003443 ORTHO05D008640 2.2e-07 59.7 154 31.8
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 2.2e-07 59.7 65 43.1
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.1e-06 57.4 68 38.2
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 3.1e-06 55.8 121 33.1


User provided reference genes

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