Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.7e-205 719.2 376 100.0
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.4e-53 214.5 370 38.9
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.0e-48 198.4 373 36.5
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 2.9e-48 196.8 374 35.8
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 5.5e-47 192.6 368 37.5
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 7.2e-47 192.2 364 35.4
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-45 188.0 372 34.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.2e-45 186.0 368 36.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 6.8e-45 185.7 373 34.6
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 6.8e-45 185.7 369 34.7
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 8.8e-45 185.3 367 33.2
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.2e-44 184.9 379 33.8
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.2e-44 184.9 369 35.2
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.5e-44 184.5 379 35.6
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.5e-44 184.5 373 33.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.4e-44 183.3 390 33.6
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 9.8e-44 181.8 374 33.2
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 9.8e-44 181.8 375 32.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.3e-43 181.4 372 32.8
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.3e-43 181.4 375 33.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 3.7e-43 179.9 364 32.1
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 2.4e-42 177.2 374 33.7
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 5.4e-42 176.0 364 33.5
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.6e-41 174.5 369 33.3
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.0e-41 174.1 372 34.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.0e-41 174.1 374 31.8
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.7e-41 173.7 370 32.4
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 4.5e-41 172.9 372 31.2
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 5.9e-41 172.6 364 34.1
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 7.7e-41 172.2 372 31.7
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.0e-40 171.8 363 31.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.3e-40 171.4 362 34.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.3e-40 171.4 369 32.0
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.3e-40 171.4 365 32.1
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.7e-40 171.0 367 32.7
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.7e-40 171.0 365 33.7
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.7e-40 171.0 379 31.9
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.2e-40 170.6 367 30.8
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.9e-40 170.2 366 31.7
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 3.8e-40 169.9 371 30.2
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 6.5e-40 169.1 373 33.5
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 6.5e-40 169.1 362 32.3
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 8.5e-40 168.7 370 32.7
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.1e-39 168.3 371 29.9
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.1e-39 168.3 371 29.9
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.5e-39 167.9 370 31.4
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.5e-39 167.2 375 31.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.5e-39 167.2 372 32.5
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 4.2e-39 166.4 371 30.7
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 4.2e-39 166.4 371 30.2
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 4.2e-39 166.4 365 32.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 5.5e-39 166.0 371 30.2
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 7.2e-39 165.6 370 30.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 7.2e-39 165.6 381 31.5
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 9.4e-39 165.2 362 32.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 9.4e-39 165.2 381 32.3
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.2e-38 164.9 380 32.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.2e-38 164.9 370 33.5
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-38 164.5 370 32.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 2.7e-38 163.7 369 31.4
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 2.7e-38 163.7 372 32.5
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.7e-38 163.7 372 32.3
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 2.7e-38 163.7 366 32.0
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 4.7e-38 162.9 373 31.1
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.7e-38 162.9 371 31.0
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.7e-38 162.9 371 31.8
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.7e-38 162.9 372 32.0
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 8.0e-38 162.2 367 31.3
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.4e-37 161.4 366 32.2
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.3e-37 160.6 371 30.5
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.3e-37 160.6 377 32.1
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.0e-37 159.8 374 30.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.2e-37 159.5 396 30.6
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 8.8e-37 158.7 367 30.2
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 2.0e-36 157.5 372 30.1
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 3.4e-36 156.8 364 31.3
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 4.4e-36 156.4 364 30.8
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 9.8e-36 155.2 366 31.1
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.2e-35 154.1 371 30.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.3e-35 152.5 239 36.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.4e-34 151.4 365 30.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.1e-34 150.2 364 30.8
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 5.4e-34 149.4 370 28.9
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.2e-33 148.3 450 29.3
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.6e-33 147.9 326 32.2
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.0e-33 147.5 379 30.1
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.8e-32 143.3 390 30.8
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 2.5e-31 140.6 365 31.8
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.6e-30 137.9 369 29.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 8.0e-30 135.6 189 40.7
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.0e-29 135.2 374 30.7
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.4e-29 134.8 374 30.5
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.8e-29 134.4 373 30.0
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 1.7e-27 127.9 190 35.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 8.3e-27 125.6 219 34.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.8e-26 124.4 483 25.3
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 4.6e-25 119.8 270 32.6
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 2.2e-19 100.9 170 36.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.0e-17 94.4 425 24.9
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.7e-16 91.3 212 29.7
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.7e-16 91.3 136 41.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.3e-16 90.9 211 29.4
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.5e-15 87.4 268 26.9
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.4e-12 76.6 57 63.2
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 9.8e-12 75.5 63 55.6
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.7e-11 73.6 63 52.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.1e-10 72.0 55 60.0
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 5.4e-10 69.7 90 45.6
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.7e-09 67.4 62 48.4
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 4.6e-09 66.6 61 57.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.1e-08 63.2 69 47.8
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 5.6e-07 59.7 83 39.8


User provided reference genes

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