Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 0.0e+00 1172.5 610 100.0
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 1.1e-161 574.3 491 61.3
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 2.4e-161 573.2 515 56.7
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.6e-160 570.5 555 55.3
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.3e-159 567.4 447 61.3
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.1e-158 564.3 453 60.5
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 4.3e-158 562.4 453 60.3
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 7.3e-158 561.6 447 63.3
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 1.3e-157 560.8 453 60.5
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 1.6e-157 560.5 517 56.7
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 3.6e-157 559.3 447 60.9
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 4.8e-157 558.9 439 61.7
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 8.1e-157 558.1 464 58.6
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 2.4e-156 556.6 434 62.9
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 6.9e-156 555.1 434 61.8
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 9.0e-156 554.7 434 61.5
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 2.0e-155 553.5 438 61.2
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 3.4e-155 552.7 434 62.7
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 4.5e-155 552.4 434 62.7
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 4.5e-155 552.4 460 60.7
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 4.5e-155 552.4 434 62.9
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 5.8e-155 552.0 434 60.8
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 7.6e-155 551.6 434 62.7
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 7.6e-155 551.6 446 60.3
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 9.9e-155 551.2 508 56.7
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 1.3e-154 550.8 434 62.7
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 1.7e-154 550.4 454 60.8
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 2.2e-154 550.1 436 62.2
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 2.2e-154 550.1 434 61.5
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 2.9e-154 549.7 457 60.2
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 3.8e-154 549.3 452 59.7
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 3.8e-154 549.3 452 59.7
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 3.8e-154 549.3 434 62.4
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 4.9e-154 548.9 452 61.7
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 6.4e-154 548.5 509 55.6
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 8.4e-154 548.1 434 62.2
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 8.4e-154 548.1 438 61.6
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 8.4e-154 548.1 434 62.2
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 8.4e-154 548.1 471 59.4
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 8.4e-154 548.1 468 58.3
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 8.4e-154 548.1 472 58.3
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 8.4e-154 548.1 434 61.3
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 8.4e-154 548.1 432 63.0
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.4e-153 547.4 434 62.0
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 3.2e-153 546.2 466 58.6
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 4.2e-153 545.8 450 60.2
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 5.4e-153 545.4 464 59.3
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 5.4e-153 545.4 436 60.8
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 7.1e-153 545.0 439 61.0
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 1.2e-152 544.3 452 59.7
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 1.6e-152 543.9 436 61.2
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.6e-152 543.9 448 60.7
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 2.1e-152 543.5 508 55.9
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.7e-152 543.1 515 56.1
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.7e-152 543.1 451 59.6
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 6.0e-152 542.0 530 53.6
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 1.0e-151 541.2 528 54.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.3e-151 540.8 529 54.4
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.3e-151 540.8 455 58.9
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 1.3e-151 540.8 438 60.5
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 1.3e-151 540.8 451 59.6
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 1.3e-151 540.8 479 56.8
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.8e-151 540.4 466 58.6
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 1.8e-151 540.4 476 58.0
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.3e-151 540.0 451 59.6
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 3.9e-151 539.3 488 56.4
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 3.9e-151 539.3 455 59.1
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 3.9e-151 539.3 528 53.4
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 5.1e-151 538.9 434 61.1
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 5.1e-151 538.9 434 61.1
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 6.7e-151 538.5 528 54.5
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 6.7e-151 538.5 475 57.1
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 8.7e-151 538.1 456 58.3
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 1.1e-150 537.7 451 60.1
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 1.5e-150 537.3 431 61.5
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.5e-150 537.3 438 59.8
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.9e-150 537.0 524 53.2
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 2.5e-150 536.6 434 61.3
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 4.3e-150 535.8 434 60.4
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 7.4e-150 535.0 417 62.1
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 9.6e-150 534.6 501 54.5
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 9.6e-150 534.6 533 53.3
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.6e-149 533.9 480 55.8
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.8e-148 530.4 475 56.6
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 9.0e-148 528.1 459 58.4
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.2e-147 527.7 411 62.5
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 7.6e-147 525.0 440 58.9
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 1.3e-146 524.2 460 57.4
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.8e-146 522.7 448 59.2
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.5e-144 516.2 516 53.9
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 6.7e-143 511.9 529 51.8
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 3.3e-142 509.6 544 51.8
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.3e-141 507.7 409 60.4
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 1.4e-140 504.2 538 51.7
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 4.1e-140 502.7 434 58.3
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.9e-140 501.9 448 57.6
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.6e-139 500.0 476 54.4
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 1.0e-138 498.0 438 56.8
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 2.2e-138 496.9 498 54.0
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 6.5e-138 495.4 512 51.6
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 3.5e-136 489.6 562 48.4
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 2.0e-131 473.8 561 50.1
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 3.8e-130 469.5 369 61.0
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 8.5e-122 441.8 467 52.0
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 2.2e-117 427.2 412 53.2
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 3.2e-113 413.3 574 44.8
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 1.2e-112 411.4 482 47.5
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 3.1e-108 396.7 387 54.0
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 4.4e-102 376.3 369 52.8
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.7e-98 364.4 321 56.7
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 2.1e-88 330.9 480 41.0
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.1e-73 282.0 473 40.0
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.7e-69 268.1 437 39.1
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 7.1e-68 262.7 372 41.9
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.2e-67 261.9 451 39.2
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.1e-67 261.2 451 39.0
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.5e-65 254.2 470 36.8
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.6e-64 251.5 234 54.7
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.5e-57 227.6 495 34.1
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 3.0e-50 204.1 177 57.6
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 1.4e-47 195.3 169 55.0
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 4.2e-28 130.6 147 48.3
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 1.3e-26 125.6 118 57.6
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 1.1e-25 122.5 137 48.9
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 9.0e-23 112.8 87 65.5
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.2e-20 104.0 129 44.2
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.7e-19 101.3 121 44.6
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 1.4e-12 79.0 104 41.3
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 7.9e-11 73.2 102 45.1
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.6e-09 68.2 56 57.1


User provided reference genes

Program Settings