Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0157s0024 Marchantia polymorpha HOM05D003873 ORTHO05D004127 3.0e-72 275.0 134 100.0
Mapoly0093s0078 Marchantia polymorpha HOM05D003873 ORTHO05D004127 1.5e-31 139.8 116 59.5
Mapoly0062s0001 Marchantia polymorpha HOM05D003873 ORTHO05D004127 7.0e-29 131.0 141 56.0
PGR044G2565 Punica granatum HOM05D003873 ORTHO05D004127 1.5e-23 113.2 120 46.7
Sed0001367 Sechium edule HOM05D003873 ORTHO05D004127 2.0e-23 112.8 120 48.3
Manes.07G140600 Manihot esculenta HOM05D003873 ORTHO05D004127 1.3e-22 110.2 120 46.7
Cc02_g05430 Coffea canephora HOM05D003873 ORTHO05D004127 1.7e-22 109.8 120 46.7
Rhsim09G0185200 Rhododendron simsii HOM05D003873 ORTHO05D004127 1.7e-22 109.8 118 46.6
Actinidia31621 Actinidia chinensis HOM05D003873 ORTHO05D004127 2.2e-22 109.4 120 47.5
MBI03_g22825_MAGBIO Magnolia biondii HOM05D003873 ORTHO05D004127 2.9e-22 109.0 120 46.7
Oeu027748.1 Olea europaea HOM05D003873 ORTHO05D004127 4.9e-22 108.2 116 46.6
Dinv34475 Davidia involucrata HOM05D003873 ORTHO05D004127 6.4e-22 107.8 117 45.3
Potri.013G092700 Populus trichocarpa HOM05D003873 ORTHO05D004127 6.4e-22 107.8 120 46.7
Thecc.10G182200 Theobroma cacao HOM05D003873 ORTHO05D004127 6.4e-22 107.8 120 45.0
Lj8A55T86 Lonicera japonica HOM05D003873 ORTHO05D004127 8.3e-22 107.5 120 45.0
TWI73G0123 Tripterygium wilfordii HOM05D003873 ORTHO05D004127 1.1e-21 107.1 120 44.2
CAN.G203.49 Capsicum annuum HOM05D003873 ORTHO05D004127 1.4e-21 106.7 120 45.8
Ciclev10032511m.g Citrus clementina HOM05D003873 ORTHO05D004127 1.4e-21 106.7 120 45.0
COL.COLO4_19435 Corchorus olitorius HOM05D003873 ORTHO05D004127 1.4e-21 106.7 120 44.2
Duzib114G0555 Durio zibethinus HOM05D003873 ORTHO05D004127 1.4e-21 106.7 120 43.3
HanXRQChr17g0560751 Helianthus annuus HOM05D003873 ORTHO05D004127 1.4e-21 106.7 120 40.8
vmacro09968 Vaccinium macrocarpon HOM05D003873 ORTHO05D004127 1.4e-21 106.7 116 44.8
MSTRG.8896 Avicennia marina HOM05D003873 ORTHO05D004127 1.9e-21 106.3 120 44.2
MELO3C020142.2 Cucumis melo HOM05D003873 ORTHO05D004127 1.9e-21 106.3 120 43.3
ATR1127G039 Amborella trichopoda HOM05D003873 ORTHO05D004127 2.4e-21 105.9 116 44.8
Cpa.g.sc19.64 Carica papaya HOM05D003873 ORTHO05D004127 2.4e-21 105.9 120 44.2
Lsat_1_v5_gn_8_13601 Lactuca sativa HOM05D003873 ORTHO05D004127 2.4e-21 105.9 116 43.1
Oeu004079.1 Olea europaea HOM05D003873 ORTHO05D004127 2.4e-21 105.9 115 46.1
Gohir.A13G006800 Gossypium hirsutum HOM05D003873 ORTHO05D004127 3.2e-21 105.5 120 42.5
Gohir.D13G007000 Gossypium hirsutum HOM05D003873 ORTHO05D004127 3.2e-21 105.5 120 42.5
Gorai.013G007200 Gossypium raimondii HOM05D003873 ORTHO05D004127 3.2e-21 105.5 120 42.5
Sabra13G0064000 Salix brachista HOM05D003873 ORTHO05D004127 3.2e-21 105.5 120 45.0
ClCG07G005060 Citrullus lanatus HOM05D003873 ORTHO05D004127 4.1e-21 105.1 120 45.0
Prupe.2G262000 Prunus persica HOM05D003873 ORTHO05D004127 5.4e-21 104.8 120 43.3
Sp4g22920 Schrenkiella parvula HOM05D003873 ORTHO05D004127 5.4e-21 104.8 120 41.7
CsaV3_5G010890 Cucumis sativus L. HOM05D003873 ORTHO05D004127 7.1e-21 104.4 120 42.5
SEGI_26560 Sequoiadendron giganteum HOM05D003873 ORTHO05D004127 7.1e-21 104.4 120 46.7
Ciclev10002574m.g Citrus clementina HOM05D003873 ORTHO05D004127 9.2e-21 104.0 120 45.0
Nitab4.5_0002279g0070 Nicotiana tabacum HOM05D003873 ORTHO05D004127 9.2e-21 104.0 120 44.2
Hund15823 Selenicereus undatus HOM05D003873 ORTHO05D004127 9.2e-21 104.0 120 42.5
Dinv21841 Davidia involucrata HOM05D003873 ORTHO05D004127 1.2e-20 103.6 116 45.7
Eucgr.J00121 Eucalyptus grandis HOM05D003873 ORTHO05D004127 1.2e-20 103.6 120 41.7
Atru.chr1.2930 Acer truncatum HOM05D003873 ORTHO05D004127 2.1e-20 102.8 120 42.5
Atru.chr3.3508 Acer truncatum HOM05D003873 ORTHO05D004127 2.1e-20 102.8 117 44.4
Atru.chr3.3515 Acer truncatum HOM05D003873 ORTHO05D004127 2.1e-20 102.8 117 44.4
BcaB06g29154 Brassica carinata HOM05D003873 ORTHO05D004127 2.1e-20 102.8 120 40.8
CSS0018140 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 2.1e-20 102.8 116 44.0
AUR62030624 Chenopodium quinoa HOM05D003873 ORTHO05D004127 2.1e-20 102.8 116 43.1
Solyc05g052260.3 Solanum lycopersicum HOM05D003873 ORTHO05D004127 2.1e-20 102.8 120 43.3
PGSC0003DMG400011653 Solanum tuberosum HOM05D003873 ORTHO05D004127 2.1e-20 102.8 120 43.3
ECA233G5425 Erigeron canadensis HOM05D003873 ORTHO05D004127 2.7e-20 102.4 120 40.0
Migut.F00602 Erythranthe guttata HOM05D003873 ORTHO05D004127 2.7e-20 102.4 120 41.7
Hma1.2p1_0292F.1_g115910 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 2.7e-20 102.4 120 42.5
QL08p064588 Quercus lobata HOM05D003873 ORTHO05D004127 2.7e-20 102.4 120 40.8
TAR369G0800 Trochodendron aralioides HOM05D003873 ORTHO05D004127 2.7e-20 102.4 120 42.5
CSS0002427 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 3.5e-20 102.1 119 44.5
CSS0021993 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 3.5e-20 102.1 119 44.5
PSO384G3509 Papaver somniferum HOM05D003873 ORTHO05D004127 4.6e-20 101.7 119 43.7
Atru.BG.255.p Acer truncatum HOM05D003873 ORTHO05D004127 6.0e-20 101.3 120 40.0
AL4G38460 Arabidopsis lyrata HOM05D003873 ORTHO05D004127 6.0e-20 101.3 120 39.2
FAN06G3214 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.0e-20 101.3 118 41.5
Nitab4.5_0000375g0180 Nicotiana tabacum HOM05D003873 ORTHO05D004127 6.0e-20 101.3 120 43.3
TWI09G0384 Tripterygium wilfordii HOM05D003873 ORTHO05D004127 6.0e-20 101.3 120 42.5
AT2G40600 Arabidopsis thaliana HOM05D003873 ORTHO05D004127 7.8e-20 100.9 120 38.3
CiPaw.02G198500 Carya illinoinensis HOM05D003873 ORTHO05D004127 7.8e-20 100.9 120 41.7
AUR62024920 Chenopodium quinoa HOM05D003873 ORTHO05D004127 7.8e-20 100.9 116 43.1
MD01G1164200 Malus domestica HOM05D003873 ORTHO05D004127 7.8e-20 100.9 120 41.7
SGA_v2.0_scaffold60G20894 Striga asiatica HOM05D003873 ORTHO05D004127 7.8e-20 100.9 120 43.3
arahy.Tifrunner.gnm1.ann1.I2EQP5 Arachis hypogaea HOM05D003873 ORTHO05D004127 1.0e-19 100.5 120 42.5
BcaC02g07324 Brassica carinata HOM05D000114 ORTHO05D004127 1.0e-19 100.5 120 40.8
A04p31040 Brassica napus HOM05D000114 ORTHO05D004127 1.0e-19 100.5 120 40.8
C04p68430 Brassica napus HOM05D000114 ORTHO05D004127 1.0e-19 100.5 120 40.8
BolC4t28343H Brassica oleracea HOM05D000114 ORTHO05D004127 1.0e-19 100.5 120 40.8
Carub.0004s2288 Capsella rubella HOM05D003873 ORTHO05D004127 1.0e-19 100.5 120 40.0
FAN03G1281 Fragaria x ananassa HOM05D003873 ORTHO05D004127 1.0e-19 100.5 116 41.4
Sopen05g030800 Solanum pennellii HOM05D003873 ORTHO05D004127 1.0e-19 100.5 115 43.5
Thecc.10G182600 Theobroma cacao HOM05D003873 ORTHO05D004127 1.0e-19 100.5 120 41.7
BraA04t18560Z Brassica rapa HOM05D000114 ORTHO05D004127 1.3e-19 100.1 120 40.8
FvH4_7g25700 Fragaria vesca HOM05D003873 ORTHO05D004127 1.3e-19 100.1 116 41.4
Lj1C966G3 Lonicera japonica HOM05D003873 ORTHO05D004127 1.3e-19 100.1 85 54.1
unitig_747.g21397 Utricularia gibba HOM05D003873 ORTHO05D004127 1.3e-19 100.1 120 44.2
Aqoxy4G02390 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 1.7e-19 99.8 120 43.3
AL4G38470 Arabidopsis lyrata HOM05D003873 ORTHO05D004127 1.7e-19 99.8 117 41.9
Hma1.2p1_0292F.1_g115890 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 1.7e-19 99.8 120 44.2
Lj1g0013289 Lotus japonicus HOM05D003873 ORTHO05D004127 1.7e-19 99.8 120 41.7
HPP92_011975 Vanilla planifolia HOM05D003873 ORTHO05D004127 1.7e-19 99.8 120 43.3
arahy.Tifrunner.gnm1.ann1.26CUCK Arachis hypogaea HOM05D003873 ORTHO05D004127 2.3e-19 99.4 120 41.7
Lalb_Chr08g0239001 Lupinus albus HOM05D003873 ORTHO05D004127 2.3e-19 99.4 120 41.7
PSO170G1346 Papaver somniferum HOM05D003873 ORTHO05D004127 2.3e-19 99.4 108 46.3
THA.LOC104824360 Tarenaya hassleriana HOM05D003873 ORTHO05D004127 2.3e-19 99.4 120 40.0
GSVIVG01032680001 Vitis vinifera HOM05D003873 ORTHO05D004127 2.3e-19 99.4 120 42.5
Ciclev10002586m.g Citrus clementina HOM05D003873 ORTHO05D004127 3.0e-19 99.0 124 39.5
Thecc.10G182400 Theobroma cacao HOM05D003873 ORTHO05D004127 3.0e-19 99.0 116 43.1
CANSAT56G3412 Cannabis sativa HOM05D003873 ORTHO05D004127 3.9e-19 98.6 117 40.2
CARHR135690 Cardamine hirsuta HOM05D003873 ORTHO05D004127 3.9e-19 98.6 120 37.5
PSO017G0702 Papaver somniferum HOM05D003873 ORTHO05D004127 3.9e-19 98.6 119 42.9
Sp4g22930 Schrenkiella parvula HOM05D003873 ORTHO05D004127 3.9e-19 98.6 117 40.2
Aa31LG3G1520 Aethionema arabicum HOM05D003873 ORTHO05D004127 5.1e-19 98.2 121 37.2
arahy.Tifrunner.gnm1.ann1.8SN1W1 Arachis hypogaea HOM05D003873 ORTHO05D004127 5.1e-19 98.2 120 41.7
Duzib128G1260 Durio zibethinus HOM05D003873 ORTHO05D004127 5.1e-19 98.2 120 40.0
PSO017G6047 Papaver somniferum HOM05D003873 ORTHO05D004127 5.1e-19 98.2 120 44.2
PSO210G1471 Papaver somniferum HOM05D000620 ORTHO05D000537 5.1e-19 98.2 120 44.2
Cfa001222 Carpinus fangiana HOM05D003873 ORTHO05D004127 6.6e-19 97.8 120 40.8
PSO210G0156 Papaver somniferum HOM05D000620 ORTHO05D000537 6.6e-19 97.8 120 44.2
Peaxi162Scf00167g01217 Petunia axillaris HOM05D003873 ORTHO05D004127 6.6e-19 97.8 120 40.8
Psat6g035920 Pisum sativum HOM05D003873 ORTHO05D004127 6.6e-19 97.8 120 40.8
arahy.Tifrunner.gnm1.ann1.HNCJ3C Arachis hypogaea HOM05D003873 ORTHO05D004127 8.6e-19 97.4 108 44.4
EL10Ac2g02628 Beta vulgaris HOM05D003873 ORTHO05D004127 8.6e-19 97.4 117 43.6
PSO210G5103 Papaver somniferum HOM05D000620 ORTHO05D000537 8.6e-19 97.4 120 43.3
RcHm_v2.0_Chr1g0371921 Rosa chinensis HOM05D003873 ORTHO05D004127 8.6e-19 97.4 120 39.2
Zm00001eb016110 Zea mays HOM05D003873 ORTHO05D004127 8.6e-19 97.4 120 41.7
CDE06G1522 Ceratophyllum demersum HOM05D003873 ORTHO05D004127 1.1e-18 97.1 120 42.5
Gohir.D10G185525 Gossypium hirsutum HOM05D003873 ORTHO05D004127 1.1e-18 97.1 120 39.2
Medtr1g007640 Medicago truncatula HOM05D003873 ORTHO05D004127 1.5e-18 96.7 120 40.8
Phvul.001G074800 Phaseolus vulgaris HOM05D003873 ORTHO05D004127 1.5e-18 96.7 120 40.0
SalBow3G4343 Salvia bowleyana HOM05D003873 ORTHO05D004127 1.5e-18 96.7 112 46.4
A05p01810 Brassica napus HOM05D003873 ORTHO05D004127 1.9e-18 96.3 117 38.5
CARHR135710 Cardamine hirsuta HOM05D003873 ORTHO05D004127 1.9e-18 96.3 117 39.3
SHI30175 Sapria himalayana HOM05D003873 ORTHO05D004127 1.9e-18 96.3 122 42.6
Sc11g0005790 Simmondsia chinensis HOM05D003873 ORTHO05D004127 1.9e-18 96.3 120 39.2
TPR.G24518 Trifolium pratense HOM05D003873 ORTHO05D004127 1.9e-18 96.3 120 40.8
Gorai.011G208100 Gossypium raimondii HOM05D003873 ORTHO05D004127 3.3e-18 95.5 117 38.5
Nn2g10324 Nelumbo nucifera HOM05D003873 ORTHO05D004127 3.3e-18 95.5 120 43.3
Pp3c13_3890 Physcomitrium patens HOM05D003873 ORTHO05D004127 3.3e-18 95.5 116 44.0
Thhalv10017560m.g Eutrema salsugineum HOM05D003873 ORTHO05D004127 4.3e-18 95.1 131 37.4
Os03g0336500 Oryza sativa ssp. japonica HOM05D003873 ORTHO05D004127 4.3e-18 95.1 120 41.7
PSO210G0819 Papaver somniferum HOM05D000620 ORTHO05D000537 5.6e-18 94.7 120 40.0
PSO384G4386 Papaver somniferum HOM05D003873 ORTHO05D004127 5.6e-18 94.7 120 39.2
SEGI_07333 Sequoiadendron giganteum HOM05D003873 ORTHO05D004127 5.6e-18 94.7 117 42.7
Glyma.14G145000 Glycine max HOM05D003873 ORTHO05D004127 7.3e-18 94.4 120 40.0
PSO017G3604 Papaver somniferum HOM05D003873 ORTHO05D004127 7.3e-18 94.4 120 40.0
VMungo0647G2356 Vigna mungo HOM05D003873 ORTHO05D004127 7.3e-18 94.4 108 41.7
Carub.0004s2289 Capsella rubella HOM05D003873 ORTHO05D004127 9.5e-18 94.0 117 39.3
Lj5g0010993 Lotus japonicus HOM05D003873 ORTHO05D004127 9.5e-18 94.0 108 42.6
BcaB06g29155 Brassica carinata HOM05D003873 ORTHO05D004127 1.2e-17 93.6 117 39.3
BcaC02g12725 Brassica carinata HOM05D003873 ORTHO05D004127 1.2e-17 93.6 120 36.7
Ca_12777_v3 Cicer arietinum L. HOM05D003873 ORTHO05D004127 1.2e-17 93.6 116 40.5
Aqoxy4G02389 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 1.6e-17 93.2 120 40.0
BraA05t19179Z Brassica rapa HOM05D003873 ORTHO05D004127 1.6e-17 93.2 125 36.0
CBR_g23787 Chara braunii HOM05D003873 ORTHO05D004127 2.8e-17 92.4 120 41.7
PSO017G6038 Papaver somniferum HOM05D003873 ORTHO05D004127 2.8e-17 92.4 120 39.2
Pp3c4_24790 Physcomitrium patens HOM05D003873 ORTHO05D004127 3.6e-17 92.0 120 40.8
SMO141G0289 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.6e-17 92.0 119 40.3
C04p02110 Brassica napus HOM05D003873 ORTHO05D004127 1.1e-16 90.5 120 35.8
BolC4t21859H Brassica oleracea HOM05D003873 ORTHO05D004127 1.1e-16 90.5 120 35.8
Gohir.A10G178900 Gossypium hirsutum HOM05D003873 ORTHO05D004127 1.1e-16 90.5 85 45.9
SMO198G0073 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.1e-16 90.5 119 38.7
PRCOL_00002258 Prasinoderma coloniale HOM05D003873 ORTHO05D004127 1.4e-16 90.1 120 37.5
Lsat_1_v5_gn_9_122981 Lactuca sativa HOM05D003873 ORTHO05D004127 2.3e-16 89.4 121 37.2
SMO119G0485 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 2.3e-16 89.4 119 43.7
SMO170G0066 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 5.2e-16 88.2 123 37.4
Psat6g036760 Pisum sativum HOM05D003873 ORTHO05D004127 8.9e-16 87.4 89 46.1
SMO119G0134 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 8.9e-16 87.4 118 41.5
Manes.10G000800 Manihot esculenta HOM05D003873 ORTHO05D004127 1.5e-15 86.7 85 49.4
C01p42730 Brassica napus HOM05D003873 ORTHO05D004127 2.6e-15 85.9 108 39.8
SMO141G0106 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 7.6e-15 84.3 87 46.0
Cre07.g336850 Chlamydomonas reinhardtii HOM05D003873 ORTHO05D004127 2.2e-14 82.8 115 40.0
SMO147G0042 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 8.4e-14 80.9 117 35.0
Cre12.g492900 Chlamydomonas reinhardtii HOM05D003873 ORTHO05D004127 7.1e-13 77.8 114 38.6
Hma1.2p1_0292F.1_g115900 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 1.6e-12 76.6 118 37.3
SMO170G0014 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 7.8e-12 74.3 88 42.0
SMO198G0098 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.0e-11 73.9 85 43.5
SMO171G0118 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 2.3e-11 72.8 88 36.4
SMO196G0079 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.9e-11 72.0 86 37.2
SMO353G0256 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.9e-11 72.0 86 37.2
Cre16.g658700 Chlamydomonas reinhardtii HOM05D003873 ORTHO05D004127 6.6e-11 71.2 117 35.9
A01p26020 Brassica napus HOM05D003873 ORTHO05D040999 8.6e-11 70.9 69 44.9
SMO145G0080 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 8.6e-11 70.9 138 29.7
TPR.G3290 Trifolium pratense HOM05D003873 ORTHO05D004127 4.3e-10 68.6 117 35.0
arahy.Tifrunner.gnm1.ann1.55I313 Arachis hypogaea HOM05D003873 ORTHO05D004127 2.8e-09 65.9 57 54.4
FAN15G2521 Fragaria x ananassa HOM05D003873 ORTHO05D035890 1.5e-07 60.1 54 46.3
Potri.010G161500 Populus trichocarpa HOM05D002318 ORTHO05D004713 8.4e-06 54.3 102 34.3


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