Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0156s0021 Marchantia polymorpha HOM05D004893 ORTHO05D006320 0.0e+00 1723.0 842 100.0
Pp3c7_4120 Physcomitrium patens HOM05D004893 ORTHO05D006320 6.3e-192 675.2 862 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3065 Anthoceros agrestis HOM05D004893 ORTHO05D006320 6.7e-186 655.2 840 44.6
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 9.2e-167 591.7 840 39.9
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 5.9e-166 589.0 843 39.5
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.0e-165 588.2 845 39.9
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 4.3e-164 582.8 839 38.9
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 5.6e-164 582.4 846 38.9
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 9.5e-164 581.6 855 38.4
Thecc.09G175700 Theobroma cacao HOM05D004893 ORTHO05D006320 3.6e-163 579.7 850 39.8
MD13G1251600 Malus domestica HOM05D004893 ORTHO05D006320 8.0e-163 578.6 843 37.8
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 1.8e-162 577.4 844 38.7
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 3.0e-162 576.6 842 39.4
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 8.9e-162 575.1 848 38.9
PGR044G2140 Punica granatum HOM05D004893 ORTHO05D006320 2.6e-161 573.5 840 38.7
Gohir.D05G004900 Gossypium hirsutum HOM05D004893 ORTHO05D006320 1.7e-160 570.9 851 40.5
SEGI_38878 Sequoiadendron giganteum HOM05D004893 ORTHO05D006320 4.9e-160 569.3 851 37.8
Lj4g0004814 Lotus japonicus HOM05D004893 ORTHO05D006320 1.1e-159 568.2 846 37.7
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 1.1e-159 568.2 848 38.1
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 1.4e-159 567.8 845 39.6
Peaxi162Scf00452g00844 Petunia axillaris HOM05D004893 ORTHO05D006320 1.4e-159 567.8 842 38.0
Gorai.009G004800 Gossypium raimondii HOM05D004893 ORTHO05D006320 3.2e-159 566.6 853 40.2
Gohir.A05G004264 Gossypium hirsutum HOM05D004893 ORTHO05D006320 1.6e-158 564.3 848 39.6
EL10Ac6g14738 Beta vulgaris HOM05D004893 ORTHO05D006320 4.6e-158 562.8 836 36.7
Lalb_Chr07g0180551 Lupinus albus HOM05D004893 ORTHO05D006320 5.9e-158 562.4 843 38.7
TWI34G0813 Tripterygium wilfordii HOM05D004893 ORTHO05D006320 3.9e-157 559.7 840 37.7
HanXRQChr09g0273501 Helianthus annuus HOM05D004893 ORTHO05D006320 5.0e-157 559.3 841 38.2
Cc05_g16000 Coffea canephora HOM05D004893 ORTHO05D006320 1.1e-156 558.1 851 37.3
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 1.1e-156 558.1 844 38.5
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 1.5e-156 557.8 846 38.1
TAR627G1078 Trochodendron aralioides HOM05D004893 ORTHO05D006320 1.5e-156 557.8 851 38.1
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 1.9e-156 557.4 847 38.4
DCAR_013745 Daucus carota HOM05D004893 ORTHO05D006320 3.3e-156 556.6 844 38.2
Sed0012025 Sechium edule HOM05D004893 ORTHO05D006320 3.3e-156 556.6 843 37.6
ClCG06G013450 Citrullus lanatus HOM05D004893 ORTHO05D006320 4.3e-156 556.2 844 37.9
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 5.6e-156 555.8 844 38.2
Nn7g38118 Nelumbo nucifera HOM05D004893 ORTHO05D006320 7.3e-156 555.4 843 37.2
ATR1098G135 Amborella trichopoda HOM05D004893 ORTHO05D006320 1.6e-155 554.3 841 37.1
Psat4g012800 Pisum sativum HOM05D004893 ORTHO05D006320 1.6e-155 554.3 842 38.1
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla HOM05D004893 ORTHO05D006320 6.2e-155 552.4 848 37.7
THA.LOC104803489 Tarenaya hassleriana HOM05D004893 ORTHO05D006320 8.0e-155 552.0 844 38.5
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 1.0e-154 551.6 845 37.2
Ah.09g231700 Amaranthus hybridus HOM05D004893 ORTHO05D006320 1.8e-154 550.8 840 38.3
Eucgr.C02353 Eucalyptus grandis HOM05D004893 ORTHO05D006320 5.2e-154 549.3 843 38.3
PSO063G4841 Papaver somniferum HOM05D004893 ORTHO05D006320 6.8e-154 548.9 846 37.0
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 8.9e-154 548.5 847 37.4
SMO356G0292 Selaginella moellendorffii HOM05D004893 ORTHO05D006320 8.9e-154 548.5 858 37.5
Aqoxy3G03036 Aquilegia oxysepala HOM05D004893 ORTHO05D006320 2.6e-153 547.0 848 36.3
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 3.4e-153 546.6 850 37.2
Rhsim13G0225800 Rhododendron simsii HOM05D004893 ORTHO05D006320 3.4e-153 546.6 867 35.6
Zm00001eb031520 Zea mays HOM05D004893 ORTHO05D006320 4.4e-153 546.2 857 37.2
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 5.8e-153 545.8 845 36.9
CANSAT11G1129 Cannabis sativa HOM05D004893 ORTHO05D006320 7.5e-153 545.4 853 37.4
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 7.5e-153 545.4 850 38.4
Sabra06G0128100 Salix brachista HOM05D004893 ORTHO05D006320 1.3e-152 544.7 902 36.3
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 1.7e-152 544.3 815 38.5
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 2.2e-152 543.9 845 36.9
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 3.7e-152 543.1 849 37.1
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 3.7e-152 543.1 845 36.9
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 3.7e-152 543.1 845 36.9
Os12g0609800 Oryza sativa ssp. japonica HOM05D004893 ORTHO05D006320 3.7e-152 543.1 842 36.9
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 8.3e-152 542.0 839 36.9
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 1.4e-151 541.2 853 36.9
Solyc07g066410.4 Solanum lycopersicum HOM05D004893 ORTHO05D006320 1.4e-151 541.2 841 37.2
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 1.9e-151 540.8 845 36.8
PSO782G3725 Papaver somniferum HOM05D004893 ORTHO05D006320 1.9e-151 540.8 845 36.4
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 3.2e-151 540.0 845 36.9
Sed0012855 Sechium edule HOM05D004893 ORTHO05D006320 4.1e-151 539.7 849 37.5
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 1.2e-150 538.1 847 36.7
CDE08G1653 Ceratophyllum demersum HOM05D004893 ORTHO05D006320 2.0e-150 537.3 839 36.6
Sopen07g034580 Solanum pennellii HOM05D004893 ORTHO05D006320 3.5e-150 536.6 843 36.8
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea HOM05D004893 ORTHO05D006320 3.9e-149 533.1 844 37.1
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 3.9e-149 533.1 849 36.7
HPP92_012201 Vanilla planifolia HOM05D004893 ORTHO05D006320 5.0e-149 532.7 841 37.6
Medtr4g127820 Medicago truncatula HOM05D004893 ORTHO05D006320 1.1e-148 531.6 848 37.1
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 1.5e-148 531.2 848 36.9
Nitab4.5_0008437g0020 Nicotiana tabacum HOM05D004893 ORTHO05D006320 1.9e-148 530.8 854 37.5
CSS0040034 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 4.3e-148 529.6 847 36.0
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 4.3e-148 529.6 843 36.5
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea HOM05D004893 ORTHO05D006320 5.6e-148 529.3 848 37.0
CSS0008978 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 7.3e-148 528.9 847 36.0
SalBow8G3700 Salvia bowleyana HOM05D004893 ORTHO05D006320 7.3e-148 528.9 844 36.4
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 2.1e-147 527.3 852 35.9
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 2.1e-147 527.3 847 37.0
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 2.8e-147 526.9 849 36.0
MSTRG.16114 Avicennia marina HOM05D004893 ORTHO05D006320 1.1e-146 525.0 838 36.8
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 2.3e-146 523.9 850 36.2
vmacro21776 Vaccinium macrocarpon HOM05D004893 ORTHO05D006320 4.0e-146 523.1 845 35.1
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 6.8e-146 522.3 851 36.4
Lsat_1_v5_gn_7_72221 Lactuca sativa HOM05D004893 ORTHO05D006320 1.5e-145 521.2 851 35.6
COL.COLO4_37741 Corchorus olitorius HOM05D004893 ORTHO05D006320 3.2e-143 513.5 876 37.7
Lj8C187G7 Lonicera japonica HOM05D004893 ORTHO05D006320 3.9e-141 506.5 854 35.4
Phvul.003G144100 Phaseolus vulgaris HOM05D004893 ORTHO05D006320 3.3e-140 503.4 839 34.7
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 3.6e-139 500.0 910 34.0
AUR62042215 Chenopodium quinoa HOM05D004893 ORTHO05D006320 1.3e-136 491.5 836 33.7
BcaB03g16682 Brassica carinata HOM05D004893 ORTHO05D006320 1.7e-133 481.1 845 35.4
AUR62033061 Chenopodium quinoa HOM05D004893 ORTHO05D006320 4.0e-130 469.9 835 32.9
Nitab4.5_0001749g0080 Nicotiana tabacum HOM05D004893 ORTHO05D006320 8.9e-130 468.8 870 34.5
Hund06466 Selenicereus undatus HOM05D004893 ORTHO05D006320 2.0e-129 467.6 759 35.7
CiPaw.08G035400 Carya illinoinensis HOM05D004893 ORTHO05D006320 1.5e-121 441.4 595 41.2
Sc12g0007760 Simmondsia chinensis HOM05D004893 ORTHO05D006320 1.5e-121 441.4 655 37.1
Migut.M01562 Erythranthe guttata HOM05D004893 ORTHO05D006320 5.1e-117 426.4 842 32.4
Actinidia07346 Actinidia chinensis HOM05D004893 ORTHO05D006320 1.2e-110 405.2 561 38.5
CBR_g49376 Chara braunii HOM05D004893 ORTHO05D006320 1.6e-110 404.8 771 34.5
unitig_748.g7834 Utricularia gibba HOM05D004893 ORTHO05D006320 1.6e-110 404.8 845 31.1
SGA_v2.0_scaffold186G40224 Striga asiatica HOM05D004893 ORTHO05D006320 4.6e-110 403.3 821 33.4
AT3G26480 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 3.3e-108 397.1 844 31.3
AL7G19230 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 1.2e-105 388.7 850 30.1
C01p06460 Brassica napus HOM05D004893 ORTHO05D006320 6.5e-104 382.9 847 31.5
Thhalv10024453m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 1.6e-99 368.2 869 29.5
BolC1t00640H Brassica oleracea HOM05D004893 ORTHO05D006320 4.1e-98 363.6 840 31.5
Dinv42517 Davidia involucrata HOM05D004893 ORTHO05D006320 8.8e-85 319.3 478 37.4
MD16G1255900 Malus domestica HOM05D004893 ORTHO05D006320 1.2e-78 298.9 605 31.4
BcaC09g52044 Brassica carinata HOM05D004893 ORTHO05D006320 1.6e-78 298.5 724 30.4
Carub.0007s0802 Capsella rubella HOM05D004893 ORTHO05D006320 6.1e-78 296.6 619 29.6
Cpa.g.sc523.1 Carica papaya HOM05D004893 ORTHO05D006320 1.8e-74 285.0 350 45.4
Cre04.g215350 Chlamydomonas reinhardtii HOM05D004893 ORTHO05D006320 8.5e-72 276.2 988 27.9
MBI02_g12652_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 1.6e-62 245.4 494 32.2
PRCOL_00005731 Prasinoderma coloniale HOM05D004893 ORTHO05D006320 7.5e-60 236.5 793 27.1
BcaB07g31639 Brassica carinata HOM05D004893 ORTHO05D006320 7.0e-58 229.9 719 27.8
Oeu016137.1 Olea europaea HOM05D004893 ORTHO05D001543 4.0e-53 214.2 387 34.4
CARHR240500 Cardamine hirsuta HOM05D004893 ORTHO05D006320 1.7e-48 198.7 379 33.2
MCO01G002 Micromonas commoda HOM05D004893 ORTHO05D006320 1.0e-45 189.5 752 25.3
RcHm_v2.0_Chr4g0401681 Rosa chinensis HOM05D004893 ORTHO05D006320 2.5e-31 141.7 149 44.3
BcaC04g22880 Brassica carinata HOM05D004893 ORTHO05D006320 3.4e-28 131.3 283 31.4
BolC9t54332H Brassica oleracea HOM05D004893 ORTHO05D006320 2.2e-27 128.6 284 31.0
C09p14300 Brassica napus HOM05D004893 ORTHO05D006320 3.2e-26 124.8 284 30.6
MBI02_g33733_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 1.1e-21 109.8 168 38.1
SHI02896 Sapria himalayana HOM05D004893 ORTHO05D006320 9.9e-20 103.2 129 41.9
Dinv42518 Davidia involucrata HOM05D004893 ORTHO05D006320 3.8e-19 101.3 176 34.1
Cfa026329 Carpinus fangiana HOM05D004893 ORTHO05D006320 4.3e-15 87.8 320 24.4
CANSAT11G1181 Cannabis sativa HOM05D004893 ORTHO05D006320 1.5e-12 79.3 213 27.7
Glyma.11G074200 Glycine max HOM05D004893 ORTHO05D006320 3.4e-12 78.2 98 45.9
BolC9t54333H Brassica oleracea HOM05D004893 ORTHO05D006320 1.3e-08 66.2 60 55.0
Cpa.g.sc95.47 Carica papaya HOM05D004893 ORTHO05D006320 8.7e-08 63.5 136 30.1
RcHm_v2.0_Chr4g0401691 Rosa chinensis HOM05D004893 ORTHO05D006320 1.3e-06 59.7 143 28.7


User provided reference genes

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