Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.6e-263 912.1 435 100.0
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.2e-114 417.5 331 59.5
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.7e-111 407.1 305 61.0
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.7e-111 406.0 338 56.8
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 2.4e-110 403.3 305 59.7
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.5e-109 400.6 305 59.0
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 5.9e-109 398.7 306 58.5
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 7.7e-109 398.3 306 58.5
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 2.2e-108 396.7 306 58.5
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.2e-108 396.7 306 58.5
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.9e-108 396.4 306 58.5
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 3.8e-108 396.0 306 59.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 5.0e-108 395.6 306 58.2
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 6.5e-108 395.2 305 58.7
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.5e-108 395.2 306 58.5
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.1e-107 394.4 320 55.0
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.4e-107 394.0 305 58.0
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.9e-107 393.7 306 57.8
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.9e-107 393.7 306 57.8
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.5e-107 393.3 305 58.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 2.5e-107 393.3 305 58.0
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.5e-107 393.3 305 58.0
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 2.5e-107 393.3 304 58.9
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.2e-107 392.5 306 57.8
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.2e-107 392.5 307 58.0
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 9.4e-107 391.3 305 58.0
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 9.4e-107 391.3 307 57.0
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.2e-106 391.0 306 57.5
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.6e-106 390.6 305 57.7
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 2.1e-106 390.2 305 56.7
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.7e-106 389.8 306 57.2
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 2.7e-106 389.8 306 57.8
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.6e-106 389.4 305 57.4
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.7e-106 389.0 304 56.9
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 4.7e-106 389.0 306 56.5
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 4.7e-106 389.0 305 58.0
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 4.7e-106 389.0 305 57.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.7e-106 389.0 306 57.2
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 6.1e-106 388.7 305 56.4
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 6.1e-106 388.7 305 57.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 7.9e-106 388.3 305 56.7
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 7.9e-106 388.3 304 56.9
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.4e-105 387.5 311 58.2
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 1.8e-105 387.1 305 57.0
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 3.0e-105 386.3 304 57.2
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 3.9e-105 386.0 305 56.4
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 3.9e-105 386.0 306 57.2
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.1e-105 385.6 304 57.2
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 5.1e-105 385.6 305 57.0
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 6.7e-105 385.2 305 56.4
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 6.7e-105 385.2 305 55.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 6.7e-105 385.2 305 57.7
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.7e-105 385.2 305 57.4
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.8e-105 384.8 294 58.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.1e-104 384.4 306 56.2
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.1e-104 384.4 306 55.9
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.1e-104 384.4 306 55.9
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.5e-104 384.0 305 57.0
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.5e-104 384.0 306 56.5
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.5e-104 384.0 306 56.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.0e-104 383.6 305 57.4
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 2.6e-104 383.3 305 57.4
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 3.3e-104 382.9 305 56.7
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.3e-104 382.9 305 57.0
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 4.4e-104 382.5 305 58.0
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 4.4e-104 382.5 306 55.9
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.7e-104 382.1 305 57.7
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 7.4e-104 381.7 305 56.4
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.4e-104 381.7 305 55.7
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 9.7e-104 381.3 307 56.7
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 9.7e-104 381.3 306 56.2
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 9.7e-104 381.3 305 55.7
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.3e-103 380.9 307 55.7
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 2.2e-103 380.2 305 58.0
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 2.8e-103 379.8 305 57.4
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.8e-103 379.8 306 54.6
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.7e-103 379.4 305 56.7
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.7e-103 379.4 305 57.0
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 6.3e-103 378.6 302 56.6
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 6.3e-103 378.6 306 55.6
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 8.2e-103 378.3 305 58.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 8.2e-103 378.3 305 56.4
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.1e-102 377.9 306 55.6
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.4e-102 377.5 305 56.4
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.4e-102 377.5 333 53.5
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.8e-102 377.1 305 56.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.8e-102 377.1 306 55.6
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.8e-102 377.1 303 57.1
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 7.0e-102 375.2 305 56.7
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 7.0e-102 375.2 305 57.0
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.5e-101 374.0 305 55.1
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 2.0e-101 373.6 302 55.6
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.5e-101 372.9 305 55.4
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 4.5e-101 372.5 303 55.4
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 4.5e-101 372.5 305 56.4
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.7e-101 371.7 305 55.4
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.7e-101 371.7 305 55.4
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 7.7e-101 371.7 305 55.4
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 1.0e-100 371.3 305 56.1
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.0e-100 371.3 305 55.1
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.3e-100 370.9 305 55.7
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.3e-100 370.9 300 56.3
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.3e-100 370.9 302 55.6
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.7e-100 370.5 302 55.3
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.2e-100 370.2 305 55.1
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 3.8e-100 369.4 303 55.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 6.5e-100 368.6 303 55.1
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 6.5e-100 368.6 303 54.8
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 6.5e-100 368.6 305 54.4
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 8.5e-100 368.2 302 54.6
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.1e-99 367.9 305 55.4
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 1.5e-99 367.5 305 54.4
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 3.2e-99 366.3 305 54.4
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 4.2e-99 365.9 302 54.3
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.5e-99 365.5 274 59.9
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 7.2e-99 365.2 305 54.1
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 9.4e-99 364.8 302 54.6
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.2e-98 364.4 306 52.9
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-98 364.0 274 59.9
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 4.7e-98 362.5 306 53.9
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.0e-98 361.7 305 53.8
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.0e-97 361.3 297 54.9
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.8e-97 360.5 305 53.8
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.3e-97 360.1 306 53.9
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.7e-97 358.6 305 53.8
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.2e-95 353.6 307 51.8
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 8.2e-95 351.7 277 58.8
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-94 349.7 303 53.8
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 5.3e-94 349.0 303 53.1
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 1.0e-92 344.7 309 53.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.8e-92 342.8 273 55.3
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 4.2e-91 339.3 302 51.7
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.6e-90 337.4 305 50.5
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.8e-84 316.2 305 48.9
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.5e-84 315.1 281 52.3
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.5e-83 314.3 305 49.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.0e-81 306.6 307 48.9
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.0e-81 306.6 307 48.9
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 5.0e-76 289.3 307 46.6
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.1e-74 282.3 296 48.3
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.2e-71 273.9 217 55.3
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.9e-67 260.8 223 51.6
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.1e-62 243.0 260 45.8
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-54 218.4 169 60.4
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.0e-48 197.6 271 41.3
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.0e-48 197.6 171 48.5
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 3.1e-41 173.7 337 33.2
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.4e-38 164.1 126 53.2
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 7.1e-38 162.5 397 29.5
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.3e-34 151.8 121 57.0
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.8e-34 149.8 103 63.1
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.6e-29 134.8 358 27.9
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.6e-29 134.8 93 60.2
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 6.2e-26 122.9 241 34.0
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.9e-12 77.0 43 76.7


User provided reference genes

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